@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00337_LEG1_H: (2014-09-05 )
MACGLVASNLNLKPGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQREAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRLNLEAINYMAADGDFKIKCVAFD

Atome Classification :

(30 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LBT_A_3(4GA9)
LEG1_RAT
[Raw transfer]



LBT_B_4(4GA9)
LEG1_RAT
[Raw transfer]



TDG_A_3(3OYW)
LEG1_HUMAN
[Raw transfer]



LAT_A_9(3M2M)
LEG1_RAT
[Raw transfer]



LAT_B_4(1W6O)
LEG1_HUMAN
[Raw transfer]



LAT_H_13(3M2M)
LEG1_RAT
[Raw transfer]



SUGAR_F_6(1SLB)
LEG1_BOVIN
[Raw transfer]
-
GAL_B_4(1W6M)
LEG1_HUMAN
[Raw transfer]



SUGAR_A_3(3OY8)
LEG1_HUMAN
[Raw transfer]
-
GOL_A_9(3W59)
?
[Raw transfer]



MQT_A_3(3T2T)
LEG1_HUMAN
[Raw transfer]



GOL_A_7(3W58)
?
[Raw transfer]



GOL_A_7(3W58)
?
[Raw transfer]



TDG_C_3(1A78)
LEG1_RHIAE
[Raw transfer]



SUGAR_F_6(1SLC)
LEG1_BOVIN
[Raw transfer]
-
SUGAR_B_4(1W6P)
LEG1_HUMAN
[Raw transfer]
-
SUGAR_A_3(1HLC)
LEG2_HUMAN
[Raw transfer]
-
LAT_A_3(1W6O)
LEG1_HUMAN
[Raw transfer]



SUGAR_A_3(2ZKN)
LEG1_HUMAN
[Raw transfer]
-
SUGAR_B_4(3OY8)
LEG1_HUMAN
[Raw transfer]
-
TDG_B_4(3OYW)
LEG1_HUMAN
[Raw transfer]



GAL_A_3(1W6M)
LEG1_HUMAN
[Raw transfer]



SUGAR_A_3(1W6P)
LEG1_HUMAN
[Raw transfer]
-
SUGAR_A_2(1C1L)
LEG1_CONMY
[Raw transfer]
-
LAT_C_10(3M2M)
LEG1_RAT
[Raw transfer]



LAT_D_11(3M2M)
LEG1_RAT
[Raw transfer]



LAT_E_12(3M2M)
LEG1_RAT
[Raw transfer]



SUGAR_C_3(1SLA)
LEG1_BOVIN
[Raw transfer]
-
SUGAR_E_5(1SLC)
LEG1_BOVIN
[Raw transfer]
-
SUGAR_E_5(1SLB)
LEG1_BOVIN
[Raw transfer]
-
10 PsiBlast_PDB 96.1197%-121 - C8 -3T2T 3.9 LEG1_HUMAN
9 PsiBlast_PDB 95.5098%-121 - C8 -1W6P 2.9 LEG1_HUMAN
11 PsiBlast_PDB 94.8997%-114 - C8 -3OY8 4.1 LEG1_HUMAN
8 PsiBlast_PDB 94.8498%-118 - C8 -1W6O 3.4 LEG1_HUMAN
12 PsiBlast_PDB 94.7897%-108 - C8 -3OYW 4.3 LEG1_HUMAN
13 PsiBlast_PDB 94.4895%-109 - C8 -2ZKN 4.4 LEG1_HUMAN
6 PsiBlast_PDB 94.3698%-117 - C8 -1W6M 2.3 LEG1_HUMAN
51 HHSearch 94.06100%-120 - C8 -3W58 3.0 ?
4 PsiBlast_PDB 93.93100%-120 - C8 -3W59 3.0 ?
16 PsiBlast_PDB 93.1486%-114 - C8 -1SLA 3.7 LEG1_BOVIN
35 PsiBlast_CBE 91.5986%-110 - C8 -1SLC 3.5 LEG1_BOVIN
14 PsiBlast_PDB 91.5789%-113 - C8 -4GA9 4.2 LEG1_RAT
18 PsiBlast_PDB 90.7986%-115 - C8 -1SLC 3.7 LEG1_BOVIN
32 PsiBlast_CBE 90.1789%-111 - C8 -4GA9 4.2 LEG1_RAT
17 PsiBlast_PDB 90.0386%-114 - C8 -1SLB 3.8 LEG1_BOVIN
36 PsiBlast_CBE 89.8086%-116 - C8 -1SLB 3.2 LEG1_BOVIN
15 PsiBlast_PDB 87.8488%-108 - C8 -3M2M 3.5 LEG1_RAT
57 HHSearch 75.4544%-109 - C8 -1HLC 3.0 LEG2_HUMAN
54 HHSearch 74.5345%-101 - C8 -1A78 4.3 LEG1_RHIAE
67 HHSearch 69.8732% -91 - C8 -4GXL -
38 PsiBlast_CBE 69.2388% -27 - C8 -3M2M 3.8 LEG1_RAT
40 PsiBlast_CBE 69.1188% -27 - C8 -3M2M 4.3 LEG1_RAT
39 PsiBlast_CBE 68.9688% -27 - C8 -3M2M 4.0 LEG1_RAT
37 PsiBlast_CBE 68.6288% -26 - C8 -3M2M 3.9 LEG1_RAT
53 HHSearch 67.3932% -92 - C8 -1C1L 4.1 LEG1_CONMY
34 PsiBlast_CBE 57.1597% 11 - C8 -3OY8 2.5 LEG1_HUMAN
33 PsiBlast_CBE 57.0997% 5 - C8 -3OYW 1.9 LEG1_HUMAN
29 PsiBlast_CBE 53.7297% 22 - C8 -1W6O 2.4 LEG1_HUMAN
31 PsiBlast_CBE 53.3697% 23 - C8 -1W6M 3.3 LEG1_HUMAN
28 PsiBlast_CBE 52.7897% 20 - C8 -1W6P 2.5 LEG1_HUMAN