@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0007: (2015-11-27 )
MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAETKLEKALVKSAWSAIKGDDVILLLIDASSYLKNIERIKTIFTRLRHTKTKCIFVINKIDLVKKPELKMTYKHLDLLYKLKKIFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRPWTDRPEEYIDDV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GNP_A_4(3IEV)
ERA_AQUAE
[Raw transfer]




GNP_A_4(3IEV)
ERA_AQUAE
[Raw transfer]




GNP_A_4(3R9W)
ERA_AQUAE
[Raw transfer]




GNP_A_5(3R9X)
ERA_AQUAE
[Raw transfer]




53 HHSearch 94.2738%-109 - C1 -3IEV 10.7 ERA_AQUAE
5 PsiBlast_PDB 93.7939%-111 - C1 -3IEV 10.6 ERA_AQUAE
6 PsiBlast_PDB 92.5139%-113 - C1 -3R9W 10.5 ERA_AQUAE
7 PsiBlast_PDB 91.9039%-107 - C1 -3R9X 10.2 ERA_AQUAE
21 PsiBlast_CBE 88.6534%-122 - C1 -3IEU - ERA_ECOLI -
3 PsiBlast_PDB 88.0734%-120 - C1 -3IEU - ERA_ECOLI -
1 PsiBlast_PDB 87.4234%-118 - C1 -1EGA - ERA_ECOLI -
22 PsiBlast_CBE 87.0934%-117 - C1 -1EGA - ERA_ECOLI -
52 HHSearch 86.7434% -93 - C1 -1WF3 - ERA_THET8 -
51 HHSearch 86.1834%-107 - C1 -1EGA - ERA_ECOLI -
8 PsiBlast_PDB 82.2434% -83 - C1 -1WF3 - ERA_THET8 -
29 PsiBlast_CBE 71.1031%-128 - C1 -2QTF - HFLX_SULSO -
42 Fugue 69.3028%-120 - C1 -1EGA - ERA_ECOLI -
28 PsiBlast_CBE 69.2131%-124 - C1 -2QTH - HFLX_SULSO -
43 Fugue 68.9226% -77 - C1 -1XZP - MNME_THEMA -
30 PsiBlast_CBE 64.5431%-124 - C1 -3KXL - HFLX_SULSO -
27 PsiBlast_CBE 62.5131%-127 - C1 -3KXI - HFLX_SULSO -
15 PsiBlast_PDB 62.3925%-121 - C1 -3GEH - MNME_NOSS1 -
18 PsiBlast_PDB 62.0328%-147 - C1 -4DCU - DER_BACSU -
59 HHSearch 61.9629%-139 - C1 -3GEH - MNME_NOSS1 -