@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0295: (2016-03-14 )
MNKISKYIAIASLSVAVTVSAPQTTNSTAFAKSSAEVQQTQQASIPASQKANLGNQNIMAVAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQMVQKDHKLVMLFGDNLLDFTDPKEATAESREALIEKHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_A_2(3OCV)
HEL_HAEIN
[Raw transfer]




AMP_A_3(3SF0)
HEL_HAEIN
[Raw transfer]




SRA_A_3(3OCZ)
HEL_HAEIN
[Raw transfer]




NMN_A_3(3OCU)
HEL_HAEIN
[Raw transfer]




2AM_A_2(3OCX)
HEL_HAEIN
[Raw transfer]




NMN_A_3(3OCU)
HEL_HAEIN
[Raw transfer]




3AM_A_3(3OCW)
HEL_HAEIN
[Raw transfer]




WO4_A_5(2I34)
?
[Raw transfer]




WO4_B_6(2I34)
?
[Raw transfer]




WO4_A_3(3ET5)
?
[Raw transfer]




PG4_A_4(3ET5)
?
[Raw transfer]




PG4_A_3(3ET4)
?
[Raw transfer]




23 HHSearch 98.6649% -44 - C3 -2I33 - ? -
1 PsiBlast_PDB 97.3647% -40 - C3 -2I33 - ? -
21 PsiBlast_CBE 96.7747% -40 - C3 -2I34 2.8 ?
2 PsiBlast_PDB 96.0547% -40 - C3 -2I34 2.8 ?
22 PsiBlast_CBE 96.0447% -43 - C3 -2I33 - ? -
3 PsiBlast_PDB 82.9933% -29 - C3 -3PCT - ? -
25 HHSearch 81.0133% -29 - C3 -3PCT - ? -
12 PsiBlast_PDB 80.9733% -23 - C3 -3SF0 5.9 HEL_HAEIN
5 PsiBlast_PDB 80.7733% -23 - C3 -3OCZ 5.5 HEL_HAEIN
4 PsiBlast_PDB 80.7333% -24 - C3 -3OCY - HEL_HAEIN -
9 PsiBlast_PDB 80.3433% -22 - C3 -3OCV 5.8 HEL_HAEIN
8 PsiBlast_PDB 80.3333% -22 - C3 -3OCU 5.3 HEL_HAEIN
11 PsiBlast_PDB 80.0733% -25 - C3 -3OCX 4.8 HEL_HAEIN
24 HHSearch 80.0032% -23 - C3 -3OCU 5.3 HEL_HAEIN
10 PsiBlast_PDB 79.8133% -22 - C3 -3OCW 5.4 HEL_HAEIN
6 PsiBlast_PDB 79.7432% -22 - C3 -3ET4 1.7 ?
7 PsiBlast_PDB 78.8532% -17 - C3 -3ET5 2.7 ?
45 Fugue 67.5723% -24 - C3 -4FYP - VSP1_ARATH -
13 PsiBlast_PDB 48.5922% -11 - C3 -1Z88 - APHA_SALTM -
15 PsiBlast_PDB 48.4621% -11 - C3 -1Z5U - APHA_SALTM -