@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0527: (2016-03-16 )
MKVLNLGSKKQASFYVACELYKEMAFNQHCKLGLATGGTMTDLYEQLVKLLNKNQLNVDNVSTFNLDEYVGLTASHPQSYHYYMDDMLFKQYPYFNRKNIHIPNGDADDMNAEASKYNDVLEQQGQRDIQILGIGENGHIGFNEPGTPFDSVTHIVDLTESTIKANSRYFKNEDDVPKQAISMGLANILQAKRIILLAFGEKKRAAITHLLNQEISVDVPATLLHKHPNVEIYLDDEACPKNVAKIHVDEMD

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

F6R_B_4(2BKX)
NAGB_BACSU
[Raw transfer]



AGP_A_13(1HOR)
NAGB_ECOLI
[Raw transfer]



F6R_A_3(2BKX)
NAGB_BACSU
[Raw transfer]



AGP_B_16(1HOR)
NAGB_ECOLI
[Raw transfer]



F6R_A_3(2BKX)
NAGB_BACSU
[Raw transfer]



GLP_B_4(2RI1)
NAGB_STRMU
[Raw transfer]



F6R_B_16(1FQO)
NAGB_ECOLI
[Raw transfer]



FPC_A_10(1FQO)
NAGB_ECOLI
[Raw transfer]



GLP_A_3(2RI1)
NAGB_STRMU
[Raw transfer]



FGS_A_4(2WU1)
NAGB_ECOLI
[Raw transfer]



FGS_B_6(2WU1)
NAGB_ECOLI
[Raw transfer]



TLA_A_5(1FS5)
NAGB_ECOLI
[Raw transfer]



TLA_A_5(1FS5)
NAGB_ECOLI
[Raw transfer]



PGA_A_3(2BKV)
NAGB_BACSU
[Raw transfer]



PGA_B_4(2BKV)
NAGB_BACSU
[Raw transfer]
58 HHSearch 97.4145% -96 - C4 -2BKX 4.4 NAGB_BACSU
23 PsiBlast_CBE 94.1745%-104 - C4 -2RI0 - NAGB_STRMU -
3 PsiBlast_PDB 93.8545%-105 - C4 -2RI0 - NAGB_STRMU -
24 PsiBlast_CBE 93.7545%-104 - C4 -2RI1 3.4 NAGB_STRMU
4 PsiBlast_PDB 92.7145%-106 - C4 -2RI1 3.7 NAGB_STRMU
61 HHSearch 90.3844% -99 - C4 -2RI0 - NAGB_STRMU -
22 PsiBlast_CBE 87.5849% -96 - C4 -2BKV 3.2 NAGB_BACSU
2 PsiBlast_PDB 87.3249% -94 - C4 -2BKX 4.4 NAGB_BACSU
27 PsiBlast_CBE 87.2833%-100 - C4 -4R7T - NAGB_VIBCH -
39 PsiBlast_CBE 87.0532%-102 - C4 -1DEA - NAGB_ECOLI -
21 PsiBlast_CBE 86.9649% -94 - C4 -2BKX 4.4 NAGB_BACSU
9 PsiBlast_PDB 86.8832%-100 - C4 -1CD5 - NAGB_ECOLI -
14 PsiBlast_PDB 86.8232% -99 - C4 -1FSF - NAGB_ECOLI -
1 PsiBlast_PDB 86.5149% -93 - C4 -2BKV 2.5 NAGB_BACSU
33 PsiBlast_CBE 86.4832%-101 - C4 -2WU1 2.8 NAGB_ECOLI
25 PsiBlast_CBE 86.3133%-103 - C4 -4R7T - NAGB_VIBCH -
31 PsiBlast_CBE 86.2232% -95 - C4 -1NE7 - GNPI1_HUMAN -
8 PsiBlast_PDB 86.2132% -98 - C4 -1HOT - NAGB_ECOLI -
7 PsiBlast_PDB 86.1332% -99 - C4 -1DEA - NAGB_ECOLI -
34 PsiBlast_CBE 86.1132% -99 - C4 -1HOT - NAGB_ECOLI -
35 PsiBlast_CBE 85.8032% -96 - C4 -1HOR 4.8 NAGB_ECOLI
10 PsiBlast_PDB 85.7732% -98 - C4 -1FQO 4.4 NAGB_ECOLI
15 PsiBlast_PDB 85.6832%-101 - C4 -2WU1 3.4 NAGB_ECOLI
6 PsiBlast_PDB 85.5532%-100 - C4 -1HOR 4.7 NAGB_ECOLI
12 PsiBlast_PDB 84.9732%-100 - C4 -1FS5 3.5 NAGB_ECOLI
38 PsiBlast_CBE 84.6632%-100 - C4 -1FQO 4.2 NAGB_ECOLI
53 HHSearch 83.7532% -95 * C4 *1FS5 3.5 NAGB_ECOLI