@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1511: (2016-03-26 )
MPKVIGLTGGIASGKSTVSELLSVFGFKVVDADKAAREAVKKGSKGLAQVREVFGDEAIDENGEMNRRYMGDLVFNHPEKRLELNAIIHPIVRDIMEEEKQEYLKQGYNVIMDIPLLFENELENTVDEVWVVYTSESIQMDRLMQRNNLSLEDAKARVYSQISIDKKSRMADHVIDNLGDKLELKQNLERLLEEEGYIEKPNYGEED

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BA3_A_6(1VHT)
COAE_ECOLI
[Raw transfer]



BA3_A_6(1VHT)
COAE_ECOLI
[Raw transfer]



BA3_B_7(1VHT)
COAE_ECOLI
[Raw transfer]



ATP_A_2(4TTQ)
COAE_LEGPH
[Raw transfer]



BA3_C_8(1VHT)
COAE_ECOLI
[Raw transfer]



ADP_A_6(1VHL)
COAE_ECOLI
[Raw transfer]



ADP_A_3(4I1V)
?
[Raw transfer]



ADP_B_4(4I1V)
?
[Raw transfer]



BU2_A_2(4TTR)
COAE_LEGPH
[Raw transfer]
36 HHSearch 91.6032% -73 * C4 *1VHT 9.2 COAE_ECOLI
35 HHSearch 91.4427% -70 - C4 -2F6R - -
12 PsiBlast_PDB 91.3733% -80 - C4 -2IF2 - COAE_AQUAE -
38 HHSearch 91.2234% -66 - C4 -1UF9 - COAE_THET8 -
37 HHSearch 90.9232% -80 - C4 -2IF2 - COAE_AQUAE -
3 PsiBlast_PDB 90.5234% -60 - C4 -1VIY - COAE_ECOLI -
2 PsiBlast_PDB 90.5134% -65 - C4 -1VHT 9.2 COAE_ECOLI
1 PsiBlast_PDB 90.4134% -61 - C4 -1VHL 7.6 COAE_ECOLI
13 PsiBlast_PDB 90.1528% -72 - C4 -2F6R - -
26 PsiBlast_CBE 89.9534% -56 - C4 -1VHL - COAE_ECOLI -
24 PsiBlast_CBE 89.8934% -59 - C4 -1VHT 9.6 COAE_ECOLI
5 PsiBlast_PDB 89.1632% -77 - C4 -4TTQ 5.6 COAE_LEGPH
22 PsiBlast_CBE 88.5434% -63 - C4 -1VIY - COAE_ECOLI -
6 PsiBlast_PDB 88.3832% -75 - C4 -4TTR 2.3 COAE_LEGPH
21 PsiBlast_CBE 87.9934% -60 - C4 -1VIY - COAE_ECOLI -
7 PsiBlast_PDB 87.1633% -58 - C4 -1T3H - COAE_ECOLI -
28 PsiBlast_CBE 85.8134% -54 - C4 -4I1U - ? -
27 PsiBlast_CBE 84.8334% -55 - C4 -4I1V 7.0 ?
10 PsiBlast_PDB 84.7434% -52 - C4 -4I1U - ? -
56 Fugue 84.5132% -57 - C4 -1JJV - COAE_HAEIN -
11 PsiBlast_PDB 84.2534% -56 - C4 -4I1V 4.8 ?
23 PsiBlast_CBE 82.2834% -59 - C4 -1VHT 8.8 COAE_ECOLI