@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0005: (2015-12-11 )
MQLCVALDLEKKEDNLSLLQELKGLDLWAKVGLRSFIRDGATFLDEIRKIDGNFKIFLDLKLYDIPYTMANAALECAKLDIDMLTVHLSSAKSALTILMQRLNALKKRPLIMGVSALTSFSEEEFLMVYNAPLKTQAITLSAIGKESGIDGVVCSVFESLAIKEALGKGFLTLTPGIRLDKNDKEDQERVANAKEAKQNLSDFIVVGRPIYQAKEPREVVLELLKDC

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BMQ_E_5(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_E_5(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_G_7(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_H_8(1EIX)
PYRF_ECOLI
[Raw transfer]




BMQ_F_6(1EIX)
PYRF_ECOLI
[Raw transfer]




U5P_H_8(1DBT)
PYRF_BACSU
[Raw transfer]




U5P_A_3(3UWQ)
PYRF_VIBCH
[Raw transfer]




U5P_B_9(3UWQ)
PYRF_VIBCH
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




C5P_B_4(2YYU)
PYRF_GEOKA
[Raw transfer]




U5P_G_7(1DBT)
PYRF_BACSU
[Raw transfer]




C5P_A_3(2YYU)
PYRF_GEOKA
[Raw transfer]




U5P_E_5(1DBT)
PYRF_BACSU
[Raw transfer]




EDO_A_4(1VQT)
PYRF_THEMA
[Raw transfer]




DTT_C_3(2CZD)
PYRF_PYRHO
[Raw transfer]




EDO_A_9(1VQT)
PYRF_THEMA
[Raw transfer]




XPE_A_4(3UWQ)
PYRF_VIBCH
[Raw transfer]




PGE_A_7(3UWQ)
PYRF_VIBCH
[Raw transfer]




45 HHSearch 99.0253%-137 * C2 *3RU6 - PYRF_CAMJE -
23 PsiBlast_CBE 98.7954%-131 - C2 -3RU6 - PYRF_CAMJE -
22 PsiBlast_CBE 98.4254%-135 - C2 -3RU6 - PYRF_CAMJE -
21 PsiBlast_CBE 97.8654%-134 - C2 -3RU6 - PYRF_CAMJE -
1 PsiBlast_PDB 97.7654%-136 - C2 -3RU6 - PYRF_CAMJE -
27 PsiBlast_CBE 81.5336%-115 - C2 -3LDV - PYRF_VIBCH -
3 PsiBlast_PDB 81.4236%-107 - C2 -3LDV - PYRF_VIBCH -
4 PsiBlast_PDB 81.0636%-117 - C2 -3UWQ 6.0 PYRF_VIBCH
46 HHSearch 81.0033%-108 - C2 -2YYU 4.3 PYRF_GEOKA
42 HHSearch 80.1836%-101 - C2 -1DBT 6.9 PYRF_BACSU
54 Fugue 80.1035%-113 - C2 -1DBT 6.9 PYRF_BACSU
26 PsiBlast_CBE 79.3736%-112 - C2 -3UWQ 6.2 PYRF_VIBCH
53 Fugue 78.6936%-105 - C2 -1DBT 6.9 PYRF_BACSU
28 PsiBlast_CBE 77.3434%-102 - C2 -2YYU 3.6 PYRF_GEOKA
37 HHSearch 76.8032%-104 - C2 -1EIX 6.4 PYRF_ECOLI
47 HHSearch 75.8331%-104 - C2 -3LDV - PYRF_VIBCH -
8 PsiBlast_PDB 75.3234%-104 - C2 -2YYU - PYRF_GEOKA -
7 PsiBlast_PDB 74.7034%-109 - C2 -2YYT - PYRF_GEOKA -
10 PsiBlast_PDB 74.3933%-117 - C2 -1L2U - PYRF_ECOLI -
11 PsiBlast_PDB 73.3532%-104 - C2 -1JJK - PYRF_ECOLI -
30 PsiBlast_CBE 73.2633%-101 - C2 -1EIX 6.4 PYRF_ECOLI
31 PsiBlast_CBE 72.9733%-104 - C2 -1EIX 6.4 PYRF_ECOLI
25 PsiBlast_CBE 72.8538% -96 - C2 -1DBT 7.1 PYRF_BACSU
9 PsiBlast_PDB 72.6033%-102 - C2 -1EIX 6.4 PYRF_ECOLI
29 PsiBlast_CBE 72.3133%-102 - C2 -1EIX 6.1 PYRF_ECOLI
2 PsiBlast_PDB 71.7738% -95 - C2 -1DBT 6.9 PYRF_BACSU
24 PsiBlast_CBE 71.1838% -93 - C2 -1DBT 7.7 PYRF_BACSU