@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_0782: (2015-12-18 )
MKVYPQVLSIAGSDSGGGAGIQADLKAFQTFGVFGTSVITCITAQNTQGVHGVYPLSVESVKAQILAIRDDFSIKAFKMGALCNAQIIECVANALETCDFGLCVLDPVMVAKNGALLLEEEAILSLKKRLLPKTNLLTPNLPEVYALTGVQARDDKSASKAMGVLRDLGVKNAVIKGGHTEHFQGEFSNDWVFLEDAEFILSAKRFNTKNTHGTGCTLSSLIVGLLAQGLDLKNAITKAKELLTIIIQNPLNIGHGHGPLNLWSIKKHV

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UEG_D_15(4C5N)
?
[Raw transfer]



UEG_A_5(4C5L)
?
[Raw transfer]



PXL_B_7(4C5N)
?
[Raw transfer]



PXL_C_11(4C5N)
?
[Raw transfer]



UEG_D_11(4C5L)
?
[Raw transfer]



UEG_C_10(4C5L)
?
[Raw transfer]



HMH_H_8(1JXI)
THID_SALTY
[Raw transfer]



GOL_A_8(1UB0)
?
[Raw transfer]



PXL_A_5(4C5N)
?
[Raw transfer]



HMH_G_7(1JXI)
THID_SALTY
[Raw transfer]



ADP_G_7(2I5B)
PDXK_BACSU
[Raw transfer]



EDO_A_3(4YL5)
?
[Raw transfer]
71 HHSearch 90.2249%-104 - C1 -1UB0 2.8 ?
1 PsiBlast_PDB 87.4442%-112 - C1 -1JXH - THID_SALTY -
22 PsiBlast_CBE 87.4042%-112 - C1 -1JXH - THID_SALTY -
73 HHSearch 86.6739%-110 - C1 -1JXH - THID_SALTY -
21 PsiBlast_CBE 86.1342%-104 - C1 -1JXI 3.2 THID_SALTY
2 PsiBlast_PDB 85.4442%-103 - C1 -1JXI 3.4 THID_SALTY
4 PsiBlast_PDB 84.8647%-107 - C1 -1UB0 - ? -
61 Fugue 84.8339% -97 - C1 -1JXH - THID_SALTY -
23 PsiBlast_CBE 82.0440%-121 - C1 -4JJP - ? -
74 HHSearch 81.5633% -97 - C1 -2I5B 4.7 PDXK_BACSU
12 PsiBlast_PDB 81.0931%-103 - C1 -3RM5 - THI20_YEAST -
3 PsiBlast_PDB 80.5540%-115 - C1 -4JJP - ? -
5 PsiBlast_PDB 80.4635% -97 - C1 -2I5B - PDXK_BACSU -
30 PsiBlast_CBE 80.2632% -99 - C1 -4C5N 3.4 ?
26 PsiBlast_CBE 80.1535% -96 - C1 -2I5B - PDXK_BACSU -
36 PsiBlast_CBE 80.0732% -99 - C1 -4C5K - ? -
24 PsiBlast_CBE 79.8135% -98 - C1 -2I5B - PDXK_BACSU -
41 PsiBlast_CBE 79.5332% -98 - C1 -4C5J - ? -
11 PsiBlast_PDB 79.4835%-115 - C1 -4YL5 2.3 ?
75 HHSearch 79.4630%-104 - C1 -3RM5 - THI20_YEAST -
28 PsiBlast_CBE 78.8432% -98 - C1 -4C5N 2.4 ?
10 PsiBlast_PDB 78.6832%-101 - C1 -4C5N 3.2 ?
29 PsiBlast_CBE 77.8832% -97 - C1 -4C5N 3.3 ?
8 PsiBlast_PDB 76.5332% -93 - C1 -4C5L 2.6 ?
34 PsiBlast_CBE 76.4732% -92 * C1 *4C5L 2.1 ?
35 PsiBlast_CBE 75.1232% -91 - C1 -4C5L 3.1 ?