@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1638: (2016-03-27 )
VIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYDLISENPKILCGFSDITALATAIYTQTELITYSGAHFSSFSMEKGLDYVMESFSDCLLQKEPFALKESATWSDDEWYLDQENRNFIPNEGLVVMQPGVAEGIIIGGNLCTLNLLQGTEYMPNLAGTILFIEDDFMTIPETFDRDLESLLSQPGADEIEGMVIGRFQQKTAMTAEKLAYIIETKTALQKIPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LMS_B_6(4INJ)
?
[Raw transfer]




GOL_A_5(4INJ)
?
[Raw transfer]




LMS_A_3(4INJ)
?
[Raw transfer]




GOL_B_11(4INJ)
?
[Raw transfer]




EDO_A_3(3TLY)
MCCF_ECOLX
[Raw transfer]




EDO_B_7(3TLY)
MCCF_ECOLX
[Raw transfer]




TLA_A_6(1ZL0)
LDC_PSEAE
[Raw transfer]




GOL_B_5(4MJX)
?
[Raw transfer]




EDO_A_10(4IIY)
MCCF_ECOLX
[Raw transfer]




21 PsiBlast_CBE 99.8099%-114 - C7 -4INJ 4.9 ?
1 PsiBlast_PDB 98.5999%-114 - C7 -4INJ 5.1 ?
2 PsiBlast_PDB 98.3096%-112 - C7 -4H1H - ? -
3 PsiBlast_PDB 87.4055%-106 - C7 -4E5S - ? -
22 PsiBlast_CBE 76.5735% -96 - C7 -3U1B - ? -
4 PsiBlast_PDB 76.2135% -95 - C7 -3U1B - ? -
11 PsiBlast_PDB 75.2734% -98 - C7 -4MI1 - ? -
9 PsiBlast_PDB 75.0134% -94 - C7 -4MJX - ? -
5 PsiBlast_PDB 74.9435% -92 - C7 -3TYX - ? -
24 PsiBlast_CBE 74.7434% -97 - C7 -3T5M - ? -
8 PsiBlast_PDB 74.7334% -94 - C7 -4JVO - ? -
26 PsiBlast_CBE 74.7034% -94 - C7 -4JVO - ? -
23 PsiBlast_CBE 74.5035% -94 - C7 -3TYX - ? -
6 PsiBlast_PDB 74.4934% -96 - C7 -3T5M - ? -
25 PsiBlast_CBE 74.0434% -94 - C7 -4MJX 3.1 ?
19 PsiBlast_PDB 73.5734% -96 - C7 -4IIY 3.0 MCCF_ECOLX
33 PsiBlast_CBE 73.5134% -96 - C7 -3TLC - MCCF_ECOLX -
30 PsiBlast_CBE 73.2734% -96 - C7 -3TLZ - MCCF_ECOLX -
31 PsiBlast_CBE 73.0434% -95 - C7 -4IIY - MCCF_ECOLX -
7 PsiBlast_PDB 72.9934% -94 - C7 -3SR3 - ? -
15 PsiBlast_PDB 72.4634% -95 - C7 -3TLY 3.0 MCCF_ECOLX
29 PsiBlast_CBE 71.3834% -94 - C7 -3TLY 3.0 MCCF_ECOLX