@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0510: (2016-04-23 )
MIRIGTRGSLLATTQAATVRDALIAGGHSAELVTISTEGDRSMAPIASLGVGVFTTALREAMEAGLVDAAVHSYKDLPTAADPRFTVAAIPPRNDPRDAVVARDGLTLGELPVGSLVGTSSPRRAAQLRALGLGLEIRPLRGNLDTRLNKVSSGDLDAIVVARAGLARLGRLDDVTETLEPVQMLPAPAQGALAVECRAGDSRLVAVLAELDDADTRAAVTAERALLADLEAGCSAPVGAIAEVVESIDEDGRVFEELSLRGCVAALDGSDVIRASGIGSCGRARELGLSVAAELFELGARELMWGVRH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

DPM_A_2(4MLV)
?
[Raw transfer]



DPM_A_2(4MLQ)
?
[Raw transfer]



DPM_A_2(4MLV)
?
[Raw transfer]



DPM_A_2(2YPN)
HEM3_ECOLI
[Raw transfer]



DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]



DPM_B_2(1YPN)
HEM3_ECOLI
[Raw transfer]



DPM_A_2(1GTK)
HEM3_ECOLI
[Raw transfer]



18W_A_2(4HTG)
HEM3_ARATH
[Raw transfer]



18W_A_2(4HTG)
HEM3_ARATH
[Raw transfer]



DPM_B_4(3EQ1)
HEM3_HUMAN
[Raw transfer]



DPM_B_4(3ECR)
HEM3_HUMAN
[Raw transfer]



DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]



DPM_A_3(3ECR)
HEM3_HUMAN
[Raw transfer]



DPM_A_3(3EQ1)
HEM3_HUMAN
[Raw transfer]



DPM_B_2(1PDA)
HEM3_ECOLI
[Raw transfer]



DPM_B_2(1PDA)
?
[Raw transfer]



ACY_C_3(1PDA)
?
[Raw transfer]



ACY_C_3(1PDA)
HEM3_ECOLI
[Raw transfer]
18 HHSearch 96.6742% -85 - C4 -3ECR 7.6 HEM3_HUMAN
4 PsiBlast_PDB 93.8243% -87 - C4 -1YPN 7.7 HEM3_ECOLI
3 PsiBlast_PDB 93.7643% -83 - C4 -1PDA 9.5 HEM3_ECOLI
2 PsiBlast_PDB 92.2643% -87 - C4 -1GTK 8.7 HEM3_ECOLI
1 PsiBlast_PDB 91.9343% -88 - C4 -2YPN 8.3 HEM3_ECOLI
15 HHSearch 91.9144% -82 - C4 -1GTK 8.7 HEM3_ECOLI
16 HHSearch 91.8838% -82 - C4 -4MLV 9.0 ?
7 PsiBlast_PDB 88.3542% -80 - C4 -3ECR 7.6 HEM3_HUMAN
13 PsiBlast_CBE 87.6042% -80 - C4 -3ECR 8.7 HEM3_HUMAN
14 PsiBlast_CBE 87.4542% -80 - C4 -3EQ1 8.7 HEM3_HUMAN
8 PsiBlast_PDB 86.8242% -80 - C4 -3EQ1 8.5 HEM3_HUMAN
17 HHSearch 85.5738% -73 * C4 *4HTG 9.7 HEM3_ARATH
6 PsiBlast_PDB 84.8439% -77 - C4 -4MLV 9.0 ?
5 PsiBlast_PDB 84.7839% -75 - C4 -4MLQ 8.7 ?
9 PsiBlast_PDB 81.6039% -74 - C4 -4HTG 9.7 HEM3_ARATH
35 Fugue 76.0146% -71 - C4 -1PDA Error ?
40 Fugue 48.6919% -73 - C3 -4XD1 - ? -
39 Fugue 42.7616% -49 - C4 -1NH8 - HIS1_MYCTU -
38 Fugue 41.3812% -34 - C4 -3UIF - ? -
37 Fugue 40.3217% -54 * C3 *4X4W - TRNT1_HUMAN -