@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1086: (2016-04-28 )
MEIIPPRLKEPLYRLYELRLRQGLAASKSDLPRHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQRDPDELAALIEIITDVVEEICAPANHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASFHVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVIRTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYGR

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GPP_B_4(2VG0)
ZFPP_MYCTU
[Raw transfer]




GPP_A_3(2VG0)
ZFPP_MYCTU
[Raw transfer]




GPP_A_3(2VG0)
ZFPP_MYCTU
[Raw transfer]




GPP_A_6(2VG3)
DPDS_MYCTU
[Raw transfer]




DPO_B_14(2VG2)
DPDS_MYCTU
[Raw transfer]




GPP_D_19(2VG3)
DPDS_MYCTU
[Raw transfer]




GPP_A_6(2VG3)
DPDS_MYCTU
[Raw transfer]




DPO_A_5(2VG2)
DPDS_MYCTU
[Raw transfer]




IPE_A_4(1X07)
UPPS_ECOLI
[Raw transfer]




DPO_C_20(2VG2)
DPDS_MYCTU
[Raw transfer]




GPP_B_9(2VG3)
DPDS_MYCTU
[Raw transfer]




GPP_C_15(2VG3)
DPDS_MYCTU
[Raw transfer]




DST_A_4(5HC7)
?
[Raw transfer]




40B_B_4(4ONC)
DPDS_MYCTU
[Raw transfer]




IPE_A_3(1X09)
UPPS_ECOLI
[Raw transfer]




DPO_C_3(2DTN)
ISPT_HELPY
[Raw transfer]




ISY_A_6(5HC8)
?
[Raw transfer]




FPP_B_11(2VG1)
ZFPP_MYCTU
[Raw transfer]




B28_B_5(2E9A)
UPPS_ECOLI
[Raw transfer]




ISY_A_6(5HC8)
?
[Raw transfer]




40B_A_3(4ONC)
DPDS_MYCTU
[Raw transfer]




IPE_B_15(2VG2)
DPDS_MYCTU
[Raw transfer]




DST_A_3(5HC7)
?
[Raw transfer]




GOL_B_19(2VG2)
DPDS_MYCTU
[Raw transfer]




IPE_A_4(1X09)
UPPS_ECOLI
[Raw transfer]




IPE_A_6(2VG2)
DPDS_MYCTU
[Raw transfer]




IPE_G_7(1X08)
UPPS_ECOLI
[Raw transfer]




89 HHSearch 99.60100%-130 - C6 -2VG0 8.0 ZFPP_MYCTU
3 PsiBlast_PDB 99.60100%-130 - C6 -2VG0 8.0 ZFPP_MYCTU
1 PsiBlast_PDB 99.17100%-130 - C6 -2VG1 - ZFPP_MYCTU -
2 PsiBlast_PDB 98.72100%-130 - C6 -2VFW - ZFPP_MYCTU -
21 PsiBlast_CBE 98.53100%-130 - C6 -2VG1 7.8 ZFPP_MYCTU
22 PsiBlast_CBE 97.63100%-126 - C6 -2VG0 6.5 ZFPP_MYCTU
23 PsiBlast_CBE 97.42100%-126 - C6 -2VFW - ZFPP_MYCTU -
58 PsiBlast_CBE 72.7833%-110 - C6 -5HC6 - ? -
57 PsiBlast_CBE 72.3533%-108 - C6 -5HC7 3.1 ?
56 PsiBlast_CBE 72.2633%-109 - C6 -5HC8 2.9 ?
6 PsiBlast_PDB 71.5130%-104 - C6 -4H8E - ISPT_STAAN -
85 HHSearch 70.4031%-101 - C6 -5HC8 2.9 ?
25 PsiBlast_CBE 70.3233% -99 - C6 -4Q9M - ISPT_STRR6 -
7 PsiBlast_PDB 70.1630%-105 - C6 -4U82 - ISPT_STAAN -
59 PsiBlast_CBE 70.1435%-100 - C6 -4ONC 3.9 DPDS_MYCTU
14 PsiBlast_PDB 69.4833%-110 - C6 -1X07 4.8 UPPS_ECOLI
82 HHSearch 69.4130% -98 - C6 -4H8E - ISPT_STAAN -
9 PsiBlast_PDB 69.3033% -94 - C6 -4Q9M - ISPT_STRR6 -
12 PsiBlast_PDB 69.2733%-106 - C6 -1V7U - UPPS_ECOLI -
44 PsiBlast_CBE 69.2433%-110 - C6 -3SGT - UPPS_ECOL6 -
60 PsiBlast_CBE 69.0435% -99 - C6 -4ONC 4.6 DPDS_MYCTU
54 PsiBlast_CBE 68.8833%-104 - C6 -1X09 4.8 UPPS_ECOLI
55 PsiBlast_CBE 68.6033%-103 - C6 -1X08 2.4 UPPS_ECOLI
67 PsiBlast_CBE 68.5735% -98 - C6 -2VG2 4.3 DPDS_MYCTU
64 PsiBlast_CBE 68.4135% -97 - C6 -2VG3 6.0 DPDS_MYCTU
68 PsiBlast_CBE 68.3635% -96 - C6 -2VG2 3.9 DPDS_MYCTU
63 PsiBlast_CBE 68.3635% -94 - C6 -2VG3 6.6 DPDS_MYCTU
62 PsiBlast_CBE 68.1435% -99 - C6 -2VG3 7.1 DPDS_MYCTU
61 PsiBlast_CBE 67.8435% -99 - C6 -2VG3 5.5 DPDS_MYCTU
65 PsiBlast_CBE 67.2635% -96 - C6 -2VG2 2.6 DPDS_MYCTU
66 PsiBlast_CBE 67.1935% -96 - C6 -2VG2 4.2 DPDS_MYCTU
83 HHSearch 66.0333% -88 - C6 -2VG3 7.0 DPDS_MYCTU
47 PsiBlast_CBE 65.6033%-109 - C6 -2E9A 3.6 UPPS_ECOLI
53 PsiBlast_CBE 64.8231% -98 - C6 -2DTN 3.0 ISPT_HELPY