@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv1350: (2016-05-01 )
MASLLNARTAVITGGAQGLGLAIGQRFVAEGARVVLGDVNLEATEVAAKRLGGDDVALAVRCDVTQADDVDILIRTAVERFGGLDVMVNNAGITRDATMRTMTEEQFDQVIAVHLKGTWNGTRLAAAIMRERKRGAIVNMSSVSGKVGMVGQTNYSAAKAGIVGMTKAAAKELAHLGIRVNAIAPGLIRSAMTEAMPQRIWDQKLAEVPMGRAGEPSEVASVAVFLASDLSSYMTGTVLDVTGGRFI

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAI_A_5(4NBU)
?
[Raw transfer]



NAP_A_5(1VL8)
?
[Raw transfer]



NAI_D_9(4NBU)
?
[Raw transfer]



NAD_G_7(1NFF)
HSD_MYCTU
[Raw transfer]



NAP_B_6(1VL8)
?
[Raw transfer]



NAI_C_8(4NBU)
?
[Raw transfer]



NAI_I_9(1NFQ)
HSD_MYCTU
[Raw transfer]



NAD_E_5(1NFF)
HSD_MYCTU
[Raw transfer]



NAD_A_5(2CFC)
HCDR_XANP2
[Raw transfer]



NAI_G_7(1NFQ)
HSD_MYCTU
[Raw transfer]



NAP_D_8(4DMM)
?
[Raw transfer]



NAP_C_7(4DMM)
?
[Raw transfer]



CAA_B_7(4NBU)
?
[Raw transfer]



EDO_B_22(3RRO)
FABG_VIBCH
[Raw transfer]



DIO_D_20(3VZP)
PHBB_CUPNH
[Raw transfer]



1PE_B_5(2PNF)
FABG_AQUAE
[Raw transfer]



EDO_A_11(3RRO)
FABG_VIBCH
[Raw transfer]



PEG_A_3(3OSU)
FABG_STAAM
[Raw transfer]



1PE_A_6(2PNF)
FABG_AQUAE
[Raw transfer]



PG4_A_4(3SJ7)
?
[Raw transfer]



PG4_B_7(3SJ7)
?
[Raw transfer]



EDO_A_7(4I08)
FABG_VIBCH
[Raw transfer]
22 PsiBlast_CBE 82.9346% -84 - C1 -4NBU 11.5 ?
21 PsiBlast_CBE 82.6846% -82 - C1 -4NBU 11.7 ?
23 PsiBlast_CBE 82.5646% -83 - C1 -4NBU 4.6 ?
1 PsiBlast_PDB 82.2046% -86 - C1 -4NBU 11.6 ?
24 PsiBlast_CBE 81.3542% -82 - C1 -4JRO - ? -
25 PsiBlast_CBE 80.8242% -85 - C1 -4JRO - ? -
47 PsiBlast_CBE 79.4940% -86 - C1 -1VL8 10.6 ?
13 PsiBlast_PDB 78.9540% -85 - C1 -1VL8 12.2 ?
130 HHSearch 78.5738% -87 - C1 -3O38 - ? -
32 PsiBlast_CBE 78.3941% -84 - C1 -2PD6 - DHB8_HUMAN -
7 PsiBlast_PDB 78.3842% -89 - C1 -2UVD - ? -
3 PsiBlast_PDB 78.0442% -85 - C1 -4JRO - ? -
10 PsiBlast_PDB 77.1741% -86 - C1 -4CQL - DHB8_HUMAN -
34 PsiBlast_CBE 76.9641% -83 - C1 -4CQM - DHB8_HUMAN -
31 PsiBlast_CBE 76.4241% -84 - C1 -2PD6 - DHB8_HUMAN -
33 PsiBlast_CBE 76.3041% -84 - C1 -2PD6 - DHB8_HUMAN -
26 PsiBlast_CBE 75.7942% -84 - C1 -4JRO - ? -
30 PsiBlast_CBE 75.2341% -86 - C1 -3SJ7 2.0 ?
72 PsiBlast_CBE 75.1336% -81 - C1 -2PNF 2.4 FABG_AQUAE
38 PsiBlast_CBE 74.9641% -84 - C1 -4CQM - DHB8_HUMAN -
71 PsiBlast_CBE 74.9436% -83 - C1 -2PNF 2.0 FABG_AQUAE
5 PsiBlast_PDB 74.8941% -86 - C1 -3SJ7 1.3 ?
8 PsiBlast_PDB 72.9540% -89 - C1 -3OSU 1.9 FABG_STAAM
69 PsiBlast_CBE 72.1744% -85 - C1 -4DMM 9.7 ?
106 PsiBlast_CBE 72.1539% -81 - C1 -3VZP 2.7 PHBB_CUPNH
68 PsiBlast_CBE 71.7544% -83 - C1 -4DMM 7.3 ?
126 HHSearch 71.4138% -81 - C1 -2CFC 7.9 HCDR_XANP2
93 PsiBlast_CBE 70.3441% -79 - C1 -1NFF 11.1 HSD_MYCTU
94 PsiBlast_CBE 70.0941% -80 - C1 -1NFF 11.4 HSD_MYCTU
90 PsiBlast_CBE 69.8841% -81 - C1 -1NFQ 10.4 HSD_MYCTU
91 PsiBlast_CBE 69.2341% -79 - C1 -1NFQ 10.8 HSD_MYCTU
55 PsiBlast_CBE 66.8736% -83 - C1 -3RRO 2.6 FABG_VIBCH
18 PsiBlast_PDB 65.7836% -87 - C1 -4I08 3.1 FABG_VIBCH
17 PsiBlast_PDB 65.5936% -82 - C1 -3RRO 3.0 FABG_VIBCH