@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2883c: (2016-05-14 )
MTEPDVAGAPASKPEPASTGAASAAQLSGYSRVLLKLGGEMFGGGQVGLDPDVVAQVARQIADVVRGGVQIAVVIGGGNFFRGAQLQQLGMERTRSDYMGMLGTVMNSLALQDFLEKEGIVTRVQTAITMGQVAEPYLPLRAVRHLEKGRVVIFGAGMGLPYFSTDTTAAQRALEIGADVVLMAKAVDGVFAEDPRVNPEAELLTAVSHREVLDRGLRVADATAFSLCMDNGMPILVFNLLTDGNIARAVRGEKIGTLVTT

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UDP_A_7(2BND)
PYRH_ECOLI
[Raw transfer]



UDP_B_13(2BND)
PYRH_ECOLI
[Raw transfer]



UTP_A_3(2BNF)
PYRH_ECOLI
[Raw transfer]



U5P_B_10(2BNE)
PYRH_ECOLI
[Raw transfer]



U5P_A_7(2BNE)
PYRH_ECOLI
[Raw transfer]



U5P_A_7(2BNE)
PYRH_ECOLI
[Raw transfer]



GOL_A_4(4A7W)
PYRH_HELPY
[Raw transfer]



GOL_A_4(4A7W)
PYRH_HELPY
[Raw transfer]



GOL_B_6(4A7W)
PYRH_HELPY
[Raw transfer]



GOL_A_5(1YBD)
PYRH_NEIMB
[Raw transfer]



GOL_A_5(1YBD)
PYRH_NEIMB
[Raw transfer]



GOL_B_25(2BNE)
PYRH_ECOLI
[Raw transfer]
22 PsiBlast_CBE 98.45100%-156 - C1 -3NWY - PYRH_MYCTU -
23 PsiBlast_CBE 96.49100%-155 - C1 -3NWY - PYRH_MYCTU -
24 PsiBlast_CBE 95.98100%-141 - C1 -3NWY - PYRH_MYCTU -
21 PsiBlast_CBE 95.88100%-156 - C1 -3NWY - PYRH_MYCTU -
62 HHSearch 94.09100%-153 - C1 -3NWY - PYRH_MYCTU -
1 PsiBlast_PDB 94.09100%-153 - C1 -3NWY - PYRH_MYCTU -
2 PsiBlast_PDB 85.0352%-142 - C1 -1Z9D - PYRH_STRP1 -
65 HHSearch 84.6054%-139 - C1 -1Z9D - PYRH_STRP1 -
28 PsiBlast_CBE 80.5547%-139 - C1 -3EK5 - PYRH_XANCP -
29 PsiBlast_CBE 79.9047%-135 - C1 -3EK5 - PYRH_XANCP -
43 PsiBlast_CBE 79.7639%-136 - C1 -2JJX - ? -
83 Fugue 79.6645%-134 * C1 *2BNE 5.8 PYRH_ECOLI
26 PsiBlast_CBE 79.5747%-138 - C1 -3EK5 - PYRH_XANCP -
3 PsiBlast_PDB 79.4947%-138 - C1 -3EK5 - PYRH_XANCP -
13 PsiBlast_PDB 79.3839%-135 - C1 -2JJX - ? -
7 PsiBlast_PDB 79.2545%-140 - C1 -2BNE 5.8 PYRH_ECOLI
25 PsiBlast_CBE 79.1847%-141 - C1 -3EK5 - PYRH_XANCP -
34 PsiBlast_CBE 79.1045%-139 - C1 -2V4Y - PYRH_ECOLI -
27 PsiBlast_CBE 79.0947%-136 - C1 -3EK5 - PYRH_XANCP -
69 HHSearch 78.8937%-135 - C1 -2JJX - ? -
6 PsiBlast_PDB 78.8945%-140 - C1 -2BND 7.6 PYRH_ECOLI
9 PsiBlast_PDB 78.8243%-139 - C1 -2BNF 7.5 PYRH_ECOLI
63 HHSearch 78.5547%-135 - C1 -1YBD 2.9 PYRH_NEIMB
10 PsiBlast_PDB 78.0345%-136 - C1 -1YBD 2.9 PYRH_NEIMB
30 PsiBlast_CBE 77.8545%-140 - C1 -2BND 7.5 PYRH_ECOLI
66 HHSearch 77.8443%-137 - C1 -4A7W 3.2 PYRH_HELPY
36 PsiBlast_CBE 76.3345%-135 - C1 -2BNE 5.8 PYRH_ECOLI
41 PsiBlast_CBE 76.1544%-139 - C1 -4A7W 2.6 PYRH_HELPY
11 PsiBlast_PDB 76.1044%-135 - C1 -4A7W 3.2 PYRH_HELPY