@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VV80: (2017-12-22 )
MVIALFSKNWSRTMSATIVNTTDDNFQADVLDAETPVLVDFWAGWCAPCKAIAPVLEDLSSEYAGKVKIVKVDVTSCEETAVKYNIRNIPALLLFKNGEVVAQQIGAVPRSKLVSFIDENV

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_D_9(5E4W)
THIO_ECO57
[Raw transfer]




MPD_A_3(2H72)
THIO_ECOLI
[Raw transfer]




PX5_A_5(3O6T)
THIO_MYCTU
[Raw transfer]




GOL_A_2(2XBI)
?
[Raw transfer]




MPD_B_6(2TRX)
THIO_ECOLI
[Raw transfer]




PX5_C_7(3O6T)
THIO_MYCTU
[Raw transfer]




EDO_A_3(4POB)
?
[Raw transfer]




EDO_A_3(4BA7)
?
[Raw transfer]




BME_A_2(2I4A)
?
[Raw transfer]




EDO_A_3(4BA7)
?
[Raw transfer]




PGE_B_4(2YN1)
?
[Raw transfer]




PEG_A_3(2VOC)
THIO_BACSU
[Raw transfer]




28 PsiBlast_CBE 88.7451%-186 - C2 -2H6Z - THIO_ECOLI -
46 PsiBlast_CBE 87.8450%-183 - C2 -2EIQ - THIO_ECOLI -
5 PsiBlast_PDB 87.6851%-171 - C2 -5HR1 - THIO_ECOLI -
11 PsiBlast_PDB 87.5351%-192 - C2 -5HR3 - THIO_ECOLI -
48 PsiBlast_CBE 86.7949%-182 - C2 -2H72 3.1 THIO_ECOLI
29 PsiBlast_CBE 86.6950%-187 - C2 -2H75 - THIO_ECOLI -
30 PsiBlast_CBE 86.5451%-187 - C2 -5HR3 - THIO_ECOLI -
21 PsiBlast_CBE 85.9755%-175 - C2 -2YN1 - ? -
220 HHSearch 85.9146%-188 - C2 -1FB6 - TRXM_SPIOL -
33 PsiBlast_CBE 85.5150%-179 - C2 -2FCH - THIO_ECOLI -
39 PsiBlast_CBE 85.4950%-190 - C2 -2BTO - THIO_ECOLI -
15 PsiBlast_PDB 85.4450%-182 - C2 -2TRX - THIO_ECOLI -
231 HHSearch 85.2756%-178 * C2 *2YN1 1.8 ?
221 HHSearch 84.9846%-184 - C2 -1FB0 - TRXM_SPIOL -
1 PsiBlast_PDB 84.9655%-172 - C2 -2YN1 - ? -
53 PsiBlast_CBE 84.8949%-195 - C2 -2H70 - THIO_ECOLI -
7 PsiBlast_PDB 84.8551%-179 - C2 -2H6Z - THIO_ECOLI -
6 PsiBlast_PDB 84.4150%-170 - C2 -5HR2 - THIO_ECOLI -
14 PsiBlast_PDB 84.3650%-173 - C2 -2FCH - THIO_ECOLI -
35 PsiBlast_CBE 84.2650%-183 - C2 -2FCH - THIO_ECOLI -
37 PsiBlast_CBE 84.2450%-174 - C2 -2TRX 4.0 THIO_ECOLI
45 PsiBlast_CBE 83.8951%-160 - C2 -4BA7 3.0 ?
219 HHSearch 83.2952%-159 - C2 -4BA7 3.0 ?
43 PsiBlast_CBE 81.0750%-182 - C2 -5E4W Error THIO_ECO57
67 PsiBlast_CBE 80.3946%-177 - C2 -4POB 2.7 ?
72 PsiBlast_CBE 79.7248%-161 - C2 -2VOC 2.7 THIO_BACSU
85 PsiBlast_CBE 78.7646%-168 - C2 -3O6T 4.6 THIO_MYCTU