@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo0032: (2016-03-11 )
LDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKATETLLKVLADYTQNIGFIAPKQTGIGVGLVGRVDHKSGVWLEIEPGKSNPTPLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETNDFIYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRHLNSYPTSILAETQTELTGKMVLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTRNEHFFQKIQDNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE

Atome Classification :

(20 SA) ----------------------------------------------------------------------.........10........20........30--...-.....40..-......50......-..60.....---...70........80..--------.-..----...---90---....--.-....100.......110.......120.......130.---.---.....140.......150.......160.......170-------..---------...---------...180.......190......--.200------.......-----210.----.....-...---220........230.......240.......250.......260......-.--270...-.....280....-.--..290-.......------.--300.......310.......320---
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------LDIQESVIGIDLGGTKILIGEVTKDGEVLNS--KSY-PSNTENQTK-ATETLLKVLADYTQ-NIGFIAPKQ---TGIGVGLVGRVDHKSGV--------W-LE----IEP---G----KSNP--T-PLAGILEAKTGLPVSLGNDVVCATMAEKQFGWGRETND---F---IYLNVGTGLAAGFVVDGRITQGGHFNAGEVGHAVVDI--------HS---------DVL---------CGCGRRGCVERLASGLGIKEEA--LRHL------NSYPTSI-----L--A----ETQTE-LTG---KM-VLHAAEQKDELAEKIIDNATFQLANLIMNLVRTTDPECVILGGGVTR-N--EH-FFQ-KIQDNLQSNTIR-F--VTKG--VVRSKLE------K--DKVGLIGAAVIGMRLGNEGGKE----
22 HHSearch 90.8428% -90 - C1 -2QM1 ? A:[3-324] -----------------------------------------------------------------------AMDKKIIGIDLGGTTIKFAILTTDGVVQQK--WSI-ETNILEDGKHIVPSIIESIRHRID-LYNMKKEDF---VGIGMGTPGSVDIEKGT--------VVGA----YNL---N----WT-T--VQPVKEQIESALGIPFALDNDANVAALGERWKGAGENNPD---V---IFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDP---------N---------GFD---------CTCGKRGCLETVSSATGVVRVA--RHLS------EEFAGDS-----E--LKQAIDDGQD-VSS---KD-VFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSA-A--GEFLRS-RVEKYFQEFTFPQVR-NSTK--IKLAELG---------NEAGVIGAASLALQFSK---------
24 HHSearch 89.5129% -91 - C1 -3VOV ? A:[2-300] ---------------------------------------------------------------------------KVVGLDLGGTKIAAGVFDG-KRLLSK--VVV-PTPKE-GGERVAEALAEAAERAER-E---AGVRG---EAIGLGTPGPLDFRRGV--------IR-------NIP--G----VQ-D--F-PIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEES---S---LYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLLP---------G---------GPA---------CGCGLEGCLEALAAGRALERDA--TYAF------Q----------------------RP-VDT---RE-LFRLFQAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVAL-NA-PEGYWE-ALLEAYRRYLQG-W--EAPP--LRRARLG---------AEAGLLGAALTAYLEVKDG-------
9 PsiBlast_PDB 89.2128% -96 - C1 -3VGK ? A:[5-307] -----------------------------------------------------------------------------IGVDIGGTKIAAGVVDEEGRILSTFKVAT-PPTAEGIVD-A---ICAAVAGASE-GHDVEA--------VGIGAAGYVDDKRAT--------V-LF----APN---I----DWRH--E-PLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDD---V---ICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRV-V--------PD---------GLL---------CGCGSQGCWEQYASGRALVRYA--KQRA------NATPENAAVLLGL--G----DGSVDGIEG---KH-ISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSD-E--GE-L----VLDPIRKSFRR-W--LIGG--EWRPHAQVLAAQLG--GKAGLVGAA-----------------
11 PsiBlast_PDB 88.7828% -95 - C1 -3VGM ? A:[5-307] -----------------------------------------------------------------------------IGVDIGGTKIAAGVVDEEGRILSTFKVAT-PPTAEGIVD-A---ICAAVAGASE-GHDVEA--------VGIGAAGYVDDKRAT--------V-LF----APN---I----DWRH--E-PLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDD---V---ICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRV-V--------PD---------GLL---------CGCGSQGCWEQYASGRALVRYA--KQRA------NATPENAAVLLGL--G----DGSVDGIEG---KH-ISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSD-E--GE-L----VLDPIRKSFRR-W--LIGG--EWRPHAQVLAAQLG--GKAGLVGAA-----------------
23 HHSearch 88.4628% -86 * C1 *3VGL ? A:[2-313] --------------------------------------------------------------------------GLTIGVDIGGTKIAAGVVDEEGRILST--FKV-ATPP--TAEGIVDAICAAVAGAS------EGHDV---EAVGIGAAGYVDDKRAT--------VLFA----PNI---D----WR-H--E-PLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDD---V---ICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVP---------D---------GLL---------CGCGSQGCWEQYASGRALVRYA--KQRA------NATPENAAV---LLGLGD--GSVDG-IEG---KH-ISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELVLD-PIRKSFRRWLIGGEWRPHAQ--VLAAQLG---------GKAGLVGAADLARQG-----------
10 PsiBlast_PDB 88.1928% -92 - C1 -3VGL ? A:[5-307] -----------------------------------------------------------------------------IGVDIGGTKIAAGVVDEEGRILSTFKVAT-PPTAEGIVD-A---ICAAVAGASE-GHDVEA--------VGIGAAGYVDDKRAT--------V-LF----APN---I----DWRH--E-PLKDKVEQRVGLPVVVENDANAAAWGEYRFGAGQGHDD---V---ICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRV-V--------PD---------GLL---------CGCGSQGCWEQYASGRALVRYA--KQRA------NATPENAAVLLGL--G----DGSVDGIEG---KH-ISEAARQGDPVAVDSFRELARWAGAGLADLASLFDPSAFIVGGGVSD-E--GE-L----VLDPIRKSFRR-W--LIGG--EWRPHAQVLAAQLG--GKAGLVGAA-----------------
2 PsiBlast_PDB 88.1327% -92 - C1 -1Z05 ? A:[129-417] -----------------------------------------------------------------------------------------------GEVLID--TKI-DIHEIDQDD-VLARLLFEIEEFFQ-TYAAQLDRV---TSIAITLPGLVNSEQGI--------V-LQ----MPH---Y----NVKN--L-ALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDN---S---VLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDP--------QG---------K-R---------CHCGNYGCLETVASSQAIRDQV--TARI------QAGEPSC-----L--A-----TVEE-ISI---ED-ICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQ-A--KSILYP-SIEQCIREQSLP-V--YHQDLKLVESRFY------K---QATMPGAALIKQAL-----------
14 PsiBlast_PDB 87.6730% -90 - C1 -3VOV ? A:[3-291] ----------------------------------------------------------------------------VVGLDLGGTKIAAG--VFDGKRLLS--KVVVPTPKEGGER-VAEALAEAAERAER-EAGV---RG---EAIGLGTPGPLDFRRGVIR--------------NIP---G----VQD---F-PIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEES---S---LYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTL-L--------PG---------GPA---------CGCGLEGCLEALAAGRALERDA--TYAF----------------------------QRP-VDT---RE-LFRLFQAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVAL-NAPEG-YWE-ALLEAYRRYLQG-W--EAPP--LRRARLG------A--E-AGLLGAAL----------------
46 Fugue 87.1724% -85 - C1 -1Z05 ? A:[34-429] DHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRGRPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEVLID--TKI-DIHEIDQDD-VLARLLFEIEEFFQ-TYAAQLDRV---TSIAITLPGLVNSEQGI--------V-LQ----MPH---Y----NVKN--L-ALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDN---S---VLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDP--------QG---------K-R---------CHCGNYGCLETVASSQAIRDQV--TARI------QAGEPSC-----L--A----TVE-E-ISI---ED-ICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQAK--SI-LYP-SIEQCIREQSLP-V--YHQDLKLVESRFY------K--QATMPGAALIKQALYDGLLLMKVVEG
25 HHSearch 85.6225% -86 - C1 -1Z05 ? A:[106-417] ------------------------------------------------------------------------LGWQFLSMRLGRGYLTIALHELGGEVLID--TKI-DIHEI-DQDDVLARLLFEIEEFFQ-TYAAQLDRV---TSIAITLPGLVNSEQGI--------VLQM----PHY---N----VK-N--L-ALGPEIYKATGLPVFVANDTRAWALAEKLFGHSQDVDN---S---VLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDP---------Q---------GKR---------CHCGNYGCLETVASSQAIRDQV--TARI------QAGEPSC--------L----ATVEE-ISI---ED-ICAAAADGDPLAVDVIQQLGRYLGAAIAIVINLFNPEKILIGGVINQ-A--KSILYP-SIEQCIREQSLP-VYHQDLK--LVESRFY---------KQATMPGAALIKQAL-----------
1 PsiBlast_PDB 85.1930% -74 - C1 -2QM1 ? A:[6-324] --------------------------------------------------------------------------KKIIGIDLGGTTIKFAILTTDGVVQQK--WSI-ETNILEDGK---HIVPSIIESIRH-RIDLYNMKKEDFVGIGMGTPGSVDIEKGTVVGAYNLNW-TT----VQP---V----KEQ----------IESALGIPFALDNDANVAALGERWKGAGENNPD---V---IFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDP--------NG----------FD---------CTCGKRGCLETVSSATGVVRVA---RHLSEEFAGDSELKQA-----I--D----DGQ-D-VSS---KD-VFEFAEKGDHFALMVVDRVCFYLGLATGNLGNTLNPDSVVIGGGVSA-A--GE-FLRSRVEKYFQEFTFP-Q--V-RN--STKIKLA------ELGNEAGVIGAASLALQFSK---------
8 PsiBlast_PDB 83.2327% -80 - C1 -4HTL BGLK_LISMO A:[6-285] ----------------------------------------------------------------------------IAAFDIGGTALKMGVVLPHGEIILT--KSA-EISGSDGDQ-ILAEMKVFLAENTD---------V---TGIAVSAPGYVNPKTGL----------------ITM---GGAIRRFDN--F-NLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDD---F---LCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSE------------------------------------RPGAFRPGKYTLNETTTM--LVLR------RQY-AEL-----T--G----RPLEE-ITG---EE-IFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITS-R--PT-FIA-ELKHHMESFGLR------DT--IIETATH------K--NQAGLLGA------------------
26 HHSearch 83.1328% -83 - C1 -2AA4 NANK_ECOLI A:[1-288] --------------------------------------------------------------------------MTTLAIDIGGTKLAAALIGADGQIRDR--REL-PTPASQTPE----ALRDALSALVS-PL---QAHA---QRVAIASTGIIRDGSLL--------ALNP----HNL---GG---LL-H--F-PLVKTLEQLTNLPTIAINDAQAAAWAEFQALD-GDITD---M---VFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADP---------H---------GPV---------CGCGRTGCVEAIASGRGIAAAA--QGEL------A-----------------------G-ADA---KT-IFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGL-A--EG-YLA-LVETYLAQEPA--A--FHVD--LLAAHYR---------HDAGLLGAALLAQG------------
29 HHSearch 82.3624% -86 - C1 -2AP1 NAGK_SALTY A:[23-326] -------------------------------------------------------------------------NAMYYGFDIGGTKIALGVFDSTRRLQWE--KRV-PTPHT-SYSAFLDAVCELVEEADQ-R----FGVK---GSVGIGIPGMPETEDGT--------LYAA----NVP---A----AS-G--K-PLRADLSARLDRDVRLDNDANCFALSEAWDDEFTQYPL---V---MGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPV--------DALTLMGFDFPLRR---------CGCGQMGCIENYLSGRGFAWLY--QHYY------D----------------------QS-LQA---PE-IIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSN-F--TA-ITT-QLAERLPRHLLP-VA-RAPR--IERARHG---------DAGGMRGAAFLHLT------------
17 PsiBlast_PDB 81.7823% -89 - C1 -2AP1 NAGK_SALTY A:[28-325] ------------------------------------------------------------------------------GFDIGGTKIALGVFDSTRRLQWE--KRV-PTPHTSYSA-FLDAVCELVEEADQ-RFGV----K---GSVGIGIPGMPETEDGT--------L-YA----ANV---P----AASG--K-PLRADLSARLDRDVRLDNDANCFALSE---AWDDEFTQ---YPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPV--------DA---------LTLMGFDFPLRRCGCGQMGCIENYLSGRGF---A--WLYQ------HYYDQSL-----Q--A----PE-------------IIALWEQGDEQAHAHVERYLDLLAVCLGNILTIVDPDLLVIGGGLSN-F--TA-ITT-QLAERLPRHLLP-V--ARAP--RIERARH------G--DAGGMRGAAFLHL-------------
3 PsiBlast_PDB 81.5231% -80 - C1 -2AA4 NANK_ECOLI A:[2-264] ---------------------------------------------------------------------------TTLAIDIGGTKLAAALIGADGQIRDR--REL-PTPASQTPE-ALRDALSALVSPLQAHAQRVAIAS---TGI---------IRDGS--------L-LA----LNPHNLG----GLLH--F-PLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG-DITD---M---VFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADP--------HG---------PV----------CGCGRTGCVEAIASGRGIA------------------------------A----AAQGE-LAGADAKT-IFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGL-A--EG-YLA-LVETYLAQEPAA-F--------------------------------------------------
21 PsiBlast_CBE 80.6631% -79 - C1 -2AA4 NANK_ECOLI B:[2-264] ---------------------------------------------------------------------------TTLAIDIGGTKLAAALIGADGQIRDR--REL-PTPASQTPE-ALRDALSALVSPLQAHAQRVAIAS---TGI---------IRDGS--------L-LA----LNPHNLG----GLLH--F-PLVKTLEQLTNLPTIAINDAQAAAWAEFQALDG-DITD---M---VFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADP--------HG---------PV----------CGCGRTGCVEAIASGRGIA------------------------------A----AAQGE-LAGADAKT-IFTRAGQGDEQAQQLIHRSARTLARLIADIKATTDCQCVVVGGSVGL-A--EG-YLA-LVETYLAQEPAA-F--------------------------------------------------
7 PsiBlast_PDB 80.6127% -91 - C1 -2YI1 A:[31-311] ---------------------------------------------------------------------------SALAVDLGGTNLRVAIVSMKGEIVK---KYT-QFNPKTYEE-RINLILQMCVEAAA-EAVKLNCRI---LGVGISTGGRVNPREGI--------V-LHSTKLIQE---W----NSVDLRT-PLSDTLH----LPVWVDNDGNCAALAERKFGQGKGLEN---F---VTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSL--------DG---------PD----------CSCGSHGCIEAYASGMALQREAKKLHDE------DLLLVEG-----M--S----------AVG---ALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLA-----SH-YIH-IVKDVIRQQAL-----------------------------------------------------
6 PsiBlast_PDB 80.1827% -92 - C1 -2YHY A:[31-311] ---------------------------------------------------------------------------SALAVDLGGTNLRVAIVSMKGEIVK---KYT-QFNPKTYEE-RINLILQMCVEAAA-EAVKLNCRI---LGVGISTGGRVNPREGI--------V-LHSTKLIQE---W----NSVDLRT-PLSDTLH----LPVWVDNDGNCAALAERKFGQGKGLEN---F---VTLITGTGIGGGIIHQHELIHGSSFCAAELGHLVVSL--------DG---------PD----------CSCGSHGCIEAYASGMALQREAKKLHDE------DLLLVEG-----M--S----------AVG---ALHLIQAAKLGNAKAQSILRTAGTALGLGVVNILHTMNPSLVILSGVLA-----SH-YIH-IVKDVIRQQAL-----------------------------------------------------
4 PsiBlast_PDB 80.0726% -76 - C1 -4DB3 NAGK_VIBVU A:[28-326] ------------------------------------------------------------------------------GFDVGGTKIEFGAFNEKLERVAT--ERV-PTPTDDYPL-LLETIAGLVAKYDQ-EFAC----E---GKIGLGLPGMEDADDAT--------V-LT----VNV---P----AAKG--K-PLRADLEAKIGRSVKIENDANCFALSE---AWDEELQDAPSV---MGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDAWFHLGDNA---------PLLG--------CGCGKKGCLDSYLSGRGFE-----LLYA------HYY------------G----EEKKA-ID-------IIKANAAGDEKAAEHVERFMELLAICFGNIFTANDPHVVALGGGLSN-F--EL-IYE-EMPKRVPKYLLS-V--AKCP--KIIKAKH------G--DSGGVRGAAFLNIK------------