@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : SA0168: (2016-03-12 )
MTRPTNNKFILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFVVALLVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIGSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWSLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFISYIEQFILRRFGE

Atome Classification :

(20 SA) ---------------------------------------------------------------------------------.........10.........20.-.......---------------------------30....--------....-----40--..---------------------------------------------------------------------.---......50....----..-------..-----60-.........70------------.........80-------.----...-..---------------------..-.--------90-.......-.100--.......110--------------.------.-.......-------------120------------------------........130.--..-----....140....-.-..-.150..--------..-.--.-------------.160...---------------....170--.-......180.---......190........200-..-------------.....210...----.-...220------.........230.--------------......--240-..----.....250.------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------------------------------------------------------------------MTRPTNNKFI-LPIITFIIFLGI-WEMVIII---------------------------GHYQPV--------LLPG-----P---AL---------------------------------------------------------------------V---GKSIWTFIVTGE----IF-------QH-----L--AISLWRFVAG-------------FVVALLVAIP--------L----GFL-LG---------------------RN-R--------WL-YNAIEPL-FQLI--RPISPIAW----------------A------P-FVVLWFG-------------IG-------------------------SLPAIAIIFIAA--FF-----PIVFNT-IKGV-R-DI-EPQYLK--------IA-A--N-------------LNLTGWS---------------LYRNILF--P-GAFKQIMAGI---HMAVGTSW-IFLVSGEMIGA-QS-------------GLGFLIVDARN----M-LNLE--------DVLAAIFFIGLFG--------------FIIDRF--ISY-IE----QFILRRFGE------------------
17 Fugue 85.7413%-183 - C2 -2ONK - WTPB_ARCFU C:[24-275] -------------------------------------------------------------------------------------MRLLFS-ALLALLSSIILL-FVLLPVA---------------------------ATVTLQ--------LFN-------------------------------------------------------------------------------------FDEFLKAASDPA----VW-------KV-----V--LTTYYAALIS-------------TLIAVIFGTP--------L----AYI-LA---------------------RK-S--------FPGKSVVEGI-VDLP--VVIPHTVA----------------G------I-ALLVVFGSSGLIGSFSPLKFVD-------------------------ALPGIVVAMLFV--SV-----PIYINQ-AKEGFA-SV-DVRLEH--------VA-R--T-------------LGSSPLR---------------VFFTVSL--P-LSVRHIVAGA---IMSWARGISEFGAVVVIAYY-PM-------------IAPTLIYERYL----S-EGLS--------AAMPVAAILILLS--------------LAVFVA--LRI-IV----G--------------------------
21 Fugue 82.2319%-177 - C1 -4QIK RC3H1_HUMAN A:[4-313] ------------------------------------------------------------GVEDTKHYEEAKKCVEELALYLKPLSSARGVGLNSTTQSVLSRPMQRKLVTL---------------------------VHCQLV--------EEEG-----R---IR---------------------------------------------------------------------AMRAARSLGERTVTEL----IL-------QHQNPQQL--SSNLWAAVRARGCQFLGPAMQEEALKLVLLALE--------D----GSA-LS---------------------RK-V--------LV-LFVVQRL-EPRF--PQASKTSI----------------G------H-VVQLLYR-------------AS--------------------------------CFKSLM-QL-----KEEFRT-YEAL-RREH-DSQIVQ--------IAME--AGLR----------IAPDQWSSLLYGDQSHKSHMQSIIDKLQT--P-ASFAQSVQEL---TIALQRT-----------GD-PA-------------NLNRLRPHLEL----L-ANIDPSPDAPPPTWEQLENGLVAVR--------------TVVHGL--VDY-IQ----NH-------------------------
23 Fugue 79.1015%-153 * C1 *4TXA RC3H1_MOUSE A:[6-399] PQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTDIELLPVNSALLQLVGLCSGVEDTKHYEEAKKCVEEL-ALYLKPVLSRPM-QRKLVTL---------------------------VHCQLVEEEGRIRAMRAA-----R---SL---------------------------------------------------------------------G---ERTVTELILQHQ----NP-------QQ-----L--SSNLWAAVRARGCQFLGPARQEEALKLVLLALE--------D----GSA-LS---------------------RK-V--------LV-LFVVQRL-EPRF--PQASKTSI----------------G------H-VVQLLYR-------------AS-------------------------CFKVTKRDSSLM--QL-----KEEFRT-YEAL-RREH-DSQIVQ--------IA-MEAG-------------LRIAPDQ---------------WSSLLYG--D-QSHKSHMQSI---IDKLQTPA-SFAQSVQELTI-AL-------------QRTG---DPAN----L-NRLR--------PHLELLANIDPSPDAPPPTWEQLENGLVAVRTV--VHG-LV----DYIQNHS--------------------
25 Fugue 77.3718%-143 - C1 -2A35 - ? A:[4-215] --------------------------------------------------------------------------------------------------------------------------------------------TPKRV--------LLAGA----T---GL---------------------------------------------------------------------T---GEHLLDRILSEP-------------------------TLAKVIA-----------------------P--------A----RKA-LA---------------------EH-P--------RL-DNPVGPL-AELL--PQLDGSID----------------T------A-FCCLGTT-------------IK-------------------------EAGS-EEAFRAV--DF-----DLPLAV-GKRA-L-EM-GARHYL--------VV-S--A-------------LGADAKS---------------SIFYNRV--K-GELEQALQEQGWPQLTIARPS-LLFGPREEFRL-AE-------------ILAAPIAGKYH----G-IEAC--------DLARALWRLALEE-----------------GKG--VRF-VE----SDELRKLGKGS----------------
9 HHSearch 75.9517%-168 - C2 -3TUI - METI_ECOLI A:[7-216] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WL----LV-------RG-----V--WETLAMTFVS-------------GFFGFVIGLP--------V----GVL-LY---------------------VT-RPGQIIANAKL-YRTVSAI-VNIF--RSIPFIIL----------------L------V-WMIPFTRVIVGTS-------IG-------------------------LQAAIVPLTVGA--AP-----FIARMV-ENAL-L-EI-PTGLIE--------AS-R--A-------------MGATPMQ---------------IVRKVLL--P-EALPGLVNAA---TITLITLV-GYSAMGGAVGA--G-------------GLGQIGYQYGY----IGYNAT--------VMNTVLVLLVILV--------------YLIQFA--GDR-IV----RAVTR----------------------
7 HHSearch 75.4812%-169 - C2 -3D31 - ? C:[58-283] -----------------------------------------------------------------------------------------------------------------------------------------------NM--------IFEQ-----I---TE---------------------------------------------------------------------D---FSGLVKAAGNRS----VI-------SS-----I--FLSLYAGFLA-------------TLLALLLGAP--------T----GYI-LA---------------------RF-DF-------PG-KRLVESI-IDVP--VVVPHTVA----------------G------I-ALLTVFG-------------SRGLIGEPLESYIQFRDA---------LPGIVVAMLFVS--MP-----YLANSA-REGF-K-SV-DPRLEN--------AA-R--S-------------LGAPLWK---------------AFFFVTL--P-LSARYLLIGS---VMTWARAI-SEFGAVVILAYYPM-------------VGPTLIYDRFI----S-YGLS--------ASRPIAVLLILVT--------------LSIFLV--IR-----------------------------------
8 HHSearch 75.3212%-176 - C2 -2ONK - WTPB_ARCFU C:[57-275] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N---FDEFLKAASDPA----VW-------KV-----V--LTTYYAALIS-------------TLIAVIFGTP--------L----AYI-LA---------------------RK-SF-------PG-KSVVEGI-VDLP--VVIPHTVA----------------G------I-ALLVVFG-------------SSGLIGSFSPLKFVDA-----------LPGIVVAMLFVS--VP-----IYINQA-KEGF-A-SV-DVRLEH--------VA-R--T-------------LGSSPLR---------------VFFTVSL--P-LSVRHIVAGA---IMSWARGI-SEFGAVVVIAYYPM-------------IAPTLIYERYL----S-EGLS--------AAMPVAAILILLS--------------LAVFVA--LRI-IV----G--------------------------
26 Fugue 59.7011%-157 - C3 -1RP4 ERO1_YEAST A:[16-389] ------------------------------------------------------------------------------GSFNELNAINENI-RDDLSALLKSDF-FKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPE--------YWQP-----E---ILGSFNNDTMKEADDSDDECKFLDQLCQTSKKPVDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQ---AGQIWSTIYQDN----CFTIGETGESL-----A--KDAFYRLVSG-------------FHASIGTHLS--------K----EYL-NT---------------------KT-G--------KW-EPNLDLFMARIG--N--FPDRV----------------T------NMYFNYAVV-------------AK-------------------------ALWKIQPYLPEF--SFCDLVNKEIKNKMDNVI-S-QL-DTKIFNEDLVFANDLS-L--T-------------LKDEFRS---------------RFKNVTK--IMDCVQCDRCRL---WGKIQTTG-YATALKILFEI-ND-------------ADEFTKQHIVG----K-LTKY--------ELIALLQTFGRLS--------------ESIESVNMFEKMYG----KRLLER---------------------
10 HHSearch 54.739%-161 - C2 -3RLF MALF_ECOLI F:[259-503] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------T---------------------------------------------------------------------G---WKNFTRVFTDEGIQKPFL-------AI-----F--VWTVVFSLIT-------------VFLTVAVGMV--------L----ACL-VQ---------------------WEAL--------RG-KAVYRVL-LILP--YAVPSFIS----------------I------L-IFKGLFN-------------QSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLG--YP-----YMMILC-MGLL-K-AI-PDDLYE--------AS-A--M-------------DGAGPFQ---------------NFFKITL--P-LLIKPLTPLM---IASFAFNF-NNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGG-QDFG--------LAAAIATLIFLLV--------------GALAI----------------------------------------
20 Fugue 53.9010%-171 - C1 -1RHC ? A:[1-330] ------------------------------------------------------------------------MKTQIGYFASLEQYRPMDA-LEQAIRAEKVG--FDSVWVD---------------------------DHFHPW--------YHDNAQSAQA---WA---------------------------------------------------------------------W---MGAALQATKKVF----IS-------TC-----I--TCPIMRYNPA-------------IVAQTFATLR--------QMYPGRVG-VAVGAGEAMNEVPVTGEWPSVPVRQ-D--------MT-VEAVKVM-RMLW--ESDKPVTFKGDYFTLDKAFLYTKPD------D-EVPLYFS-------------GM-------------------------GPKGAKLAGMYGDHLM-----TVAAAP-STLK-N-VT-IPKFEE--------GA-R--E-------------AGKDPSK---------------MEHAMLI--W-YSVDPDYDKA---VEALRFWA-GCL-VPSMFKY-KV-------------YDPKEVQLHAN----L-VHCD--------TIKENYMCATDAE--------------EMIKEI--ERF-KEAGINHFCLGNSSPDVNFGIDIFKEVIPAVRD
22 Fugue 50.009%-137 * C3 *2II2 ? A:[6-309] --------------------------------------------------------------------------YGDAIPEVKAILEAKNE-EELVTFTSRWSA-EERKELR---------------------------TQFQDT--------TGLE--------------------------------------------------------------------------------F---IAFLKKCIKNGP----YE-------DV-----M--ALGWDCNISA-------------RVNVIKKAMKNVNDFRAIH----DVV-LI---------------------AT-P--------DE-RLKLAQA-YKEKTGNDLLQDFV----------------DQIPLTSA-ASYLCHL-------------AI-------------------------RENRTPRGSVAS--DA-----EVLKHN-LIDA-D-EPDHEAVVR--------LI-I--TSTADEYKEINHRFEVLTGKS---------------VQEAIETRYA-DKENARGLCI---AHYYNLAP-ARAVAYAFHSA-VE-------------TQN---DDMAY----E-QAAR--------ITGLFHDLHKFAW--------------VHYACW--GVM-RD----DILSRFQSKEANKVNFRDACLMFWKLA
2 PsiBlast_PDB 38.9925% -97 - C2 -2YEV COX13_THET8 A:[378-454] ----------------------------------------------------------------------------------------------------------DSYFVV---------------------------AHFHNV--------LMAG-----SGFGAF---------------------------------------------------------------------A---GLYYWWPKMTGR----MY-------DE-----RLGRLHFWLFLVG-------------YLLTFLPQYA--------L----GYLGMP---------------------RR-Y--------YT-YNA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 34.2828% -45 - C4 -4LDO - ? B:[31-104] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNIMGW-----------------YRQA----P-GKQRELVAAI---HSGGTTNY-ANSVKGRFTIS-RD-------------NAANTVYLQMN----S-LKPE--------DTAVYYCNVKDFG--------------AII------------------------------------------
4 PsiBlast_PDB 33.7928% -52 * C4 *4LDL - ? B:[31-104] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNIMGW-----------------YRQA----P-GKQRELVAAI---HSGGTTNY-ANSVKGRFTIS-RD-------------NAANTVYLQMN----S-LKPE--------DTAVYYCNVKDFG--------------AII------------------------------------------
3 PsiBlast_PDB 32.6128% -50 - C4 -4LDE - ? B:[31-104] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNIMGW-----------------YRQA----P-GKQRELVAAI---HSGGTTNY-ANSVKGRFTIS-RD-------------NAANTVYLQMN----S-LKPE--------DTAVYYCNVKDFG--------------AII------------------------------------------
14 HHSearch 32.5019% 17 - C2 -1UMQ - A:[49-75] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IY-E-MC-DRNVSE--------TA-R--R-------------LNMHRRT---------------LQRIL------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 32.2528% -39 - C4 -4QKX - ? B:[31-104] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNIMGW-----------------YRQA----P-GKQRELVAAI---HSGGTTNY-ANSVKGRFTIS-RD-------------NAANTVYLQMN----S-LKPE--------DTAVYYCNVKDFG--------------AII------------------------------------------
1 PsiBlast_PDB 28.4830% -47 - C2 -4K02 - DNAT1_ARATH A:[38-80] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PVSPVCC----------------Q------P-FKVLHGG-------------VS-------------------------ALIAESLASMGA--HM-----ASGFKR-VAGI-Q-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 25.5119% 97 - C2 -3W5A - SARCO_RABIT C:[7-27] ---------------------------------------------------------------------------------------ELCL-NFTVVLITVILI-WLLVR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 HHSearch 23.8117% -46 - C2 -3TUI - METI_ECOLI A:[3-37] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EP----MM-------WL-----L--VRGVWETLAM-------------TFVSGFFGFV--------I----GLP-VG---------------------VL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------