@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0664: (2015-12-17 )
MDFKNKKWLFLAPLAGYTDLPFRSVVKKFGVDVTTSEMVSSHSLVYAFDKTSKMLEKSPLEDHFMAQISGSKESVVKEAVEKINALDHVSGIDFNCGCPAPKVANHGNGSGLLKDLNHLVEILKVIRENTNKKITSVKVRLGFEKKIPKEIAHALNDAPVDYVVVHGRTRSDRYQKDKIDYESIALMKKILKKPVIANGEIDSVKKAFEVLQITQADGLMIGRATLRAPWIFWQIRNNTTELPAVVKKDLVLEHFDKMVEFYGDRGVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV

Atome Classification :

(20 SA) .........10......--------.-----.20-------.......--.-30...-..-..---..---40.....-------------------.---------.-----------.---------------------50.-...---.---.----..60........70-----------------------.-----------------------.----------------------......80........-90......---------.---------.100.......110.......120.......130-...-.....140-----...------.----.----...-150.---......160.......----------------170-----------------.----------------.--...---.-.---..180.......190-..-......200.......210.......220.....-..230...----....240---.----........250.......260-----..-.-....270.......280.......290.......300.......310.......320......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MDFKNKKWLFLAPLAGY--------T-----DLP-------FRSVVKK--F-G-VDV-TT-SE---MV---SSHSLVY-------------------A---------F-----------D---------------------KTS-KML---E---K----SPLEDHFMAQISGS-----------------------K-----------------------E----------------------SVVKEAVEKINALDHV-SGIDFNCG---------C---------PAPKVANHGNGSGLLKDLNHLVEILKVIRENTN--KKI-TSVKVRL------GFE------K----K----IPK-EIAH---ALNDAPVDYVVVHGRT----------------R-------------------S----------------D--RYQ---K-D---KIDYESIALMKKIL--KK-PVIANGEIDSVKKAFEVLQITQADGLMIGRATLR-APWIFWQI----RNNTT-----E----LPAVVKKDLVLEHFDKMVEFY-----GD-R-GVIMFRKNLHAYAKGEMQASAFRNCVNTLTEIKSMRESIEEFFNQEMLQSEVPLWVELNQKSV
1 PsiBlast_PDB 96.5632% -88 - C2 -1VHN ? A:[9-307] ----------LAPMAGY--------T-----DSA-------FRTLAFE--W-G-ADF-AF-SE---MV---SAKGFLM-------------------N---------S-----------Q---------------------KTE-ELL---P---Q-----PHERNVAVQIFGS-----------------------E-----------------------P----------------------NELSEAARILS--EKY-KWIDLNAG---------C---------PVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS--GKF--SVKTRL------GWE------K----N----EVE-EIYR---ILVEEGVDEVFIHTRT----------------V-------------------V----------------Q--SFT-----G---RAEWKALSVLEKRI-----PTFVSGDIFTPEDAKRALEESGCDGLLVARGAIG-RPWIFKQIKDFLRSGKY-----S----EPS---REEILRTFERHLELLIKTK-GE-RKAVVEMRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE----------------
25 HHSearch 93.4131% -73 - C2 -1VHN ? A:[5-309] ------VKVGLAPMAGY--------T-----DSA-------FRTLAFE--W-G-ADF-AF-SE---MV---SAKGFLM-------------------N---------S-----------Q---------------------K-T-EEL---L---P----QPHERNVAVQIFGS-----------------------E-----------------------P----------------------NELSEAARIL-SE-KY-KWIDLNAG---------C---------PVRKVVKEGAGGALLKDLRHFRYIVRELRKSVS--GK--FSVKTRL------GWE------K----N----EVE-EIYR---ILVEEGVDEVFIHTRT----------------V-------------------V----------------Q--SFT---G-----RAEWKALSVLEK----RI-PTFVSGDIFTPEDAKRALEESGCDGLLVARGAIG-RPWIFKQI----KDFLRSGKYSE----PSREEILRTFERHLELLIKTK-----GERK-AVVEMRKFLAGYTKDLKGARRFREKVMKIEEVQILKEMFYNFIKEVE----------------
49 Fugue 86.1428% -72 - C2 -4BFA DUSC_ECOLI A:[22-338] ----ASMRVLLAPMEGV--------L-----DSL-------VRELLTE--VND-YDL-CI-TE---FVRVVDQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------C---------PSKTVNGSGGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWDS-----G----E----KKF-EIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MP----WPEVVALLQKYTRLEKQGDTGL-Y-HVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL----------------
50 Fugue 80.1425% -86 - C2 -3B0P DUSAL_THET8 A:[2-318] LDPR----LSVAPMVDR--------T-----DRH-------FRFLVRQ--V-S-LGV-RLYTE---MT---VDQAVLR-----------------------------------------G---------------------NRE-RLL---A---F----RPEEHPIALQLAGS-----------------------D-----------------------P----------------------KSLAEAARIGEAFGY--DEINLNLG---------C---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VPV-T-VKMRL------GLE------GKETYR----GLA-QSVE---AMAEAGVKVFVVHAR---------------------------------------------------------SAL---I-P---PLRHDWVHRLKGDF--PQLTFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYE-DPFVLEEA----DRRVF-----G----LPRRPSRLEVARRMRAYLEEE-----VL-K-GTPPWAVLRH-----------MLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE--
26 HHSearch 75.7522% -72 - C2 -3B0P DUSAL_THET8 A:[2-318] ----LDPRLSVAPMVDR--------T-----DRH-------FRFLVRQ--V-S-LGVRLY-TE---MT---VDQAVLR-------------------G---------N-----------R---------------------E---RLL---A---F----RPEEHPIALQLAGS-----------------------D-----------------------P----------------------KSLAEAARIG-EAFGY-DEINLNLG---------C---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VP--VTVKMRL------GLE------G----KETYRGLA-QSVE---AMAEAGVKVFVVHARS----------------A-------------------L--------------------------IP---PLRHDWVHRLKGDFP-QL-TFVTNGGIRSLEEALFHLK--RVDGVMLGRAVYE-DPFVLEEA----DRRVF-----GLPRRPSRLEVARRMRAYLEEEVLKG--------T-PPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE---------------
21 PsiBlast_CBE 74.9931% -78 - C2 -4BFA DUSC_ECOLI B:[26-268] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG----------------------------GGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL---------------
3 PsiBlast_PDB 73.8531% -76 - C2 -4BFA DUSC_ECOLI A:[26-268] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------C---------PSKTVNGSGGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL---------------
2 PsiBlast_PDB 73.1431% -81 - C2 -3W9Z DUSC_ECOLI A:[3-245] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------C----------------------LLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEHVAR-----IK-Q-WLSYLRKEYDEATELFQHVRVSPDIARAIQAIDIEK---------------------------
23 PsiBlast_CBE 73.0731% -76 - C2 -4YCO DUSC_ECOLI B:[9-251] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------A---------PS----GSGGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDI------------------
5 PsiBlast_PDB 72.8131% -71 - C2 -4YCP DUSC_ECOLI A:[9-251] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------A---------P-------GGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL---------------
22 PsiBlast_CBE 72.7631% -76 - C2 -4YCO DUSC_ECOLI C:[9-251] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------A---------PS----GSGGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEK----------------
4 PsiBlast_PDB 72.2031% -73 - C2 -4YCO DUSC_ECOLI A:[9-251] --------VLLAPMEGV--------L-----DSL-------VRELLTE--V-NDYDL-CI-TEFVRVV---DQLLPVK-------------------V---------F-----------H---------------------RIC-PEL---QNASR----TPSGTLVRVQLLGQ-----------------------F-----------------------P----------------------QWLAENAARAVELGS--WGVDLNCG---------A---------PS----GSGGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEK----------------
7 PsiBlast_PDB 69.7727% -78 - C2 -3B0P DUSAL_THET8 A:[6-246] --------LSVAPMVDR--------T-----DRH-------FRFLVRQ--V-S-LGV-RLYTE---MT---VDQAVLR-------------------G-------------------------------------------NRE-RLL---A---F----RPEEHPIALQLAGS-----------------------D-----------------------P----------------------KSLAEAARIGEAFGY--DEINLNLG---------C---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VPV-T-VKMRL------GLEG-----K----E----TYR-GLAQSVEAMAEAGVKVFVVHARSALIPPL----------R-------------------H----------------D--WVH---R-L---KGDFPQLTF------------VTNGGIRSLEEA--LFHLKRVDGVMLGRAVYE-DPFVLEEA----DRRVF-----G----LPRRPSRLEVARRMRAYLEEE-----VL-K-GTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEEVGE-------------
10 PsiBlast_PDB 67.4628% -73 - C2 -3B0V DUSAL_THET8 C:[27-267] --------LSVAPMVDR--------T-----DRH-------FRFLVRQVSL-G-VRL-YT-EM---TV---DQAVL-------------------------------R-----------G---------------------NRE-RLL---A---F----RPEEHPIALQLAGS-----------------------D-----------------------P----------------------KSLAEAARIGEAFGY--DEINLNLG---------C---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VPV-T-VKMRL------GLEG-----K----E----TYR-GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR-------------------H----------------D--WVH---R-L---KGDFPQLTF------------VTNGGIRSLEEA--LFHLKRVDGVMLGRAVYE-DPFVLEEA----DRRVF-----G----LPRRPSRLEVARRMRAYLEEE-----VL-K-GTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLMEEE----------------
42 HHSearch 65.9719% -65 - C2 -1JUB PYRDA_LACLM A:[7-289] ANAKFANPFMNASGVHC--------M-----TIE-------DLEELKA--S-Q-AGA-YI-TK---SS---TLEKREG-------------------N---------PL----------PRYVDLELGSINSMGLPNLGFDYYL-DYV---L---KNQKENAQEGPIFFSIAGM-----------------------S-----------------------A----------------------AENIAMLKKI-QESDFSGITELNLS---------C---------PNVPGE-----PQLAYDFEATEKLLKEVFTFFT--KP--LGVKLPP------YFD------L----V----HFD-IMAE---ILNQFPLTYVNSVNSI----------------GNGLFIDPEAESVVIKPKDGF----------------G--GIG---G-AYIKPTALANVRAFYTRLKPEI-QIIGTGGIETGQDAFEHLL-CGATMLQIGTALHKEGPAIFDRI----IKELE-----E----IMNQKGYQSIADFHGKLKSL--------------------------------------------------------------------------
6 PsiBlast_PDB 62.4238% -86 - C2 -4BF9 DUSC_ECOLI A:[114-268] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVDLNCG---------C---------PSKTVNGSGGGATLLKDPELIYQGAKAMREAVP--AHLPVSVKVRL------GWD------S----G----EKKFEIAD---AVQQAGATELVVHGRT----------------K-------------------E----------------Q--GYR---A-E---HIDWQAIGDIRQRL--NI-PVIANGEIWDWQSAQQCMAISGCDAVMIGRGALN-IPNLSRVV----KYNEP-----R----MPWPEVVALLQKYTRLEKQGD-----TG-L-YHVARIKQWLSYLRKEYDEATELFQHVRVLNNSPDIARAIQAIDIEKL---------------
8 PsiBlast_PDB 61.1427% -56 - C2 -3B0U DUSAL_THET8 X:[6-246] --------LSVAPMVDR--------T-----DRH-------FRFLVRQ--V-S-LGV-RLYTE---MT---VDQAVLR-------------------G-------------------------------------------NRE-RLL---A---F----RPEEHPIALQLAGS-----------------------D-----------------------P----------------------KSLAEAARIGEAFGY--DEINLNLG---------C---------PSEKAQEGGYGACLLLDLARVREILKAMGEAVR--VPV-T-VKMRL------GLEG-----K----E----TYR-GLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLR-------------------H----------------D--WVH---R-L---KGDFPQLTF------------VTNGGIRSLEEA--LFHLKRVDGVMLGRAVYE-DPFVLEEA----DRRVF-----G----LPRRPSRLEVARRMRAYLEEE-----VL-K-GTPPWAVLRHMLNLFRGRPKGRLWRRLLSEGRSLQALDRALRLME------------------
30 HHSearch 59.7818% -70 - C2 -3HGJ ? A:[11-336] GGLRLKNRLAMSPMCQYSATLEGEVT-----DWHLLH----YPTRAL---G-G-VGL-IL-VE---AT---AVEPLGR-------------------I---------SPYDLGIWSEDHL---------------------PGL-KEL---A---RRI--REAGAVPGIQLAHA-----------------------GRKAGTARPWEGGKPLGWRVVGPSPIPFDEGYPVPEPLDEAGMERILQAFVEGARRA-LRAGF-QVIELHMA---------HGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELP--LFVRVSATDWGEGGWS------L----E----DTL-AFAR---RLKELGVDLLDCSSGG----------------V-------------------V----------------L--RVRIPLA-P---GFQVPFADAVRKRV--GL-RTGAVGLITTPEQAETLLQAGSADLVLLGRVLLR-DPYFPLRA----AKALG-----V----APEVPPQYQRGF----------------------------------------------------------------------------------
28 HHSearch 59.2316% -65 - C2 -3GR7 NAMA_GEOKA A:[12-325] RGLTLKNRIVMSPMCMY--------SCDTKDGAVRTWHKIHYPARAV---G-Q-VGL-II-VE---AT---GVTPQGR-------------------ISERDLGIWSDDH---------I---------------------AGL-REL---V---GLV--KEHGAAIGIQLAHAGRKSQVPGEIIAPSAVPFDDSSPT-----------------------PKEMTKADIEETV----------QAFQNGARRA-KEAGF-DVIEIHAAHGYLINEFLS---------PLSNRRQDEYGGSPENRYRFLGEVIDAVREVWD--GP--LFVRISA------SDYHPDGLTA----K----DYV-PYAK---RMKEQGVDLVDVSSGA----------------I-------------------V----------------PARMNV---Y-P---GYQVPFAELIRREA--DI-PTGAVGLITSGWQAEEILQNGRADLVFLGRELLR-NPYWPYAA----ARELG-----A----KISAPVQYERGWRF--------------------------------------------------------------------------------
46 HHSearch 55.9816% -64 - C2 -1EP3 PYRDB_LACLM A:[12-287] PGLDLKNPIIPASGCFG--------F-----GEE-------YAKYYDL--N-K-LGS-IM-VK---AT---TLHPRFGNPTPRVAETASGMLNAIGLQ---------NPGL--------E---------------------VIMTEKLPWLN---E----NFPELPIIANVAGS-----------------------E-----------------------E----------------------ADYVAVCAKIGDAANV-KAIELNIS---------C---------PNVK----HGGQAFGTDPEVAAALVKACKAVSK--VP--LYVKLSP------NVT----------------DIV-PIAK---AVEAAGADGLTMINTL----------------M-------------------GVRFDLKTRQPILANITG--GLS---G-PAIKPVALKLIHQVAQDV--DI-PIIGMGGVANAQDVLEMYM-AGASAVAVGTANFA-DPFVCPKI----IDKLP-----E----LMDQYRIESLESLIQEVKEGK-----K-------------------------------------------------------------------