@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1444: (2016-03-24 )
LTKLKKVMISVIAATLLLLAGCGSSAVIKTDAGSVTQDELYEAMKTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSFKENLEYNLLVQKATEANMDVSESKLKAYYKTWEPDITVRHILVDDEATAKEIQTKLKNGEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYGYHLIQLVKKTEKGTYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN

Atome Classification :

(20 SA) .........10.....--...20........30........40......----------------..50........60.....-----...70........80....---.----...90...-.....100.......110.....-----.---.120---........130----....------------.------...140...------------..------------------------------------------------------------------------------------------------------------------------.---------------------.----------------------150..--......-.-160----.-..-......170.......180.......-190---.......200.......210.---------....-...220.......--230.-........240.......250.......260.......270.......280.......290..------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) LTKLKKVMISVIAATL--LLLAGCGSSAVIKTDAGSVTQDELYEAMKTT----------------YGNEVVQQLTFKKILEDKY-----TVTEKEVNAEYKKYEEQYG---D----SFESTLSS-NNLTKTSFKENLEYNLLVQKATE-----A---NMD----VSESKLKAYY-----KTWE------------P------DITVRHILV------------DD------------------------------------------------------------------------------------------------------------------------E---------------------A----------------------T--AK--EIQTKL-K-N------G-EK-FTDLAKEYSTDTATSTNGGLLDPFGP-GEM---DETFEKAAYALENKDDVS-GI---------VKST-YGYHLIQLVKKTE--K--G-TYAKEKANVKAAYIKSQLTSENMTAALKKELKAANIDIKDSDLKDAFADYTSTSSTSSTTTSN------------------------------------------------------------------------------
70 HHSearch 93.6124% -65 - C8 -3RFW - CBF2_CAMJE A:[22-273] --------------------------ATVATVNGKSISDTEVSEFFAPMLRGQDFKTLPDN----QKKALIQQYIMQDLILQDAKKQNLEKDP-LYTKELD------------------------------RAKDAILVNVYQEKIL------N---TIK----IDAAKVKAFY-----DQNK------------DKYVKPARVQAKHILV------------AT------------------------------------------------------------------------------------------------------------------------E---------------------K----------------------E--AK--DIINEL-K-GLKGKELD-AK-FSELAKEKSIDPGSKNQGGELGWFDQ-STM---VKPFTDAAFALK-NGTITTTP---------VKTN-FGYHVILKENSQAKGQ--I-KFDEVKQGIENGLKFEEFK-KVINQKGQDLLNSAKVEYK------------------------------------------------------------------------------------------------------
71 HHSearch 91.6518% -43 - C8 -1M5Y - SURA_ECOLI A:[27-427] --------------------------KVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQIMERLIMDQIILQMGQKMGVKISDEQLDQAIANIAKQNN---MTLD-QMRSRLAY-DGLNYNTYRNQIRKEMIISEVRNNEVR-R---RIT----ILPQEVESLA-----QQV--------------T-----ELNLSHILI------------PLPENPTSDQVNEAESQARAIVDQARNGADFGKLAIAHSADQQALNGGQMGWGRIQELPGIFAQALSTAKKGDIVGPIRSGVGFHILKVNDLRGESKNISVTEVHARHILLKPSPIMTDEQAR---------------------V----------------------K--LE--QIAADI-K-S------GKTT-FAAAAKEFSQDPGSANQGGDLGWATP-DIF---DPAFRDALTRLN-KGQMS-AP---------VHSS-FGWHLIELLDTRN--VD----------RAYRMLMNRKFS-EEAASWMQEQRASAYVKILS-----------------------------------------------------------------------------------------------------
68 HHSearch 83.0516% -38 * C9 *3NRK - ? A:[52-351] --------------------------RVIATVGTVSISELDLDDATEKYNRLQKHLKHEDYRKS-FRTRIIDFLIDRAIVDVVAEEESIQVNEQRVDSEIEKRMEVMG---ITNRKQFEKTMETSSGMPFELWVTELPYQIKKGQLLQ-----LKIAVPP----PNEQEIRSWY-----NQNKDKVG--------F------EIRYRIISI------------AP------------------------------------------------------------------------------------------------------------------------E---------------------NDSIQEENRLYK-----------E--VS--EIRKSI-LAD------P-SS-FALIAGSPRNDPALRARRGMVEWISS-FDLYKYSKITATIAAPLP-NGGVS-EV---------FRDERKRYCILKIEGKRP-----T-PMENLRGGIQNILYRDKEE-DTFHRWLKESRAEIPIQIFDEAYRKENK---------------------------------------------------------------------------------------------
101 Fugue 82.0415% -31 - C5 -1M5Y - SURA_ECOLI A:[25-427] ---VDKVAAVVNNGVVLESDVDGLMQSVKLNAAQARQQLPDDATLRHQI----------------MERLIMDQIILQMGQKMGV-----KISDEQLDQAIANIAKQNNMTLD----QMRSRLAY-DGLNYNTYRNQIRKEMIISEVRN-----N---EVRRRITILPQEVESLA-----QQ-V------------T------ELNLSHILIPLPENPTSDQVNEA------------------------------------------------------------------------------------------------------------------------E---------------------S----------------------Q--AR--AIVDQA-R-N------G-AD-FGKLAIAHSADQ-QALNGGQMGWGRI-QEL---PGIFAQALSTA-KKGDIV-GP---------IRSG-VGFHILKVNDLRG--E--SKNISVTEVHARHILLKPSPIMTDEQARVKLEQIAADIKSGKTTFAAAAKEFSQDPGSANQGGDLGWATPDIFDPAFRDALTRLNKGQMSAPVHSSFGWHLIELLDTRNVDRAYRMLMNRKFSEEAASWMQEQRASAYVKILS
98 Fugue 81.5020% -26 - C6 -3RFW - CBF2_CAMJE A:[22-273] --------------------------ATVATVNGKSISDTEVSEFFAPM----------------LRGQDFKTLPDNQKKALIQ-----QYIMQDLILQDAKKQNLEK---D----PLYTKELD-RAKDAILVNVYQEKILNTIKIDA-----A---KVK----AFYDQNKDKY-----VK-P------------A------RVQAKHILV------------AT------------------------------------------------------------------------------------------------------------------------E---------------------K----------------------E--AK--DIINEL-K-GLKGKELD-AK-FSELAKEKSIDPGSKNQGGELGWFDQ-STM---VKPFTDAAFALKNGTITT-TP---------VKTN-FGYHVILKENSQA--K--G-QIKFDEVKQGIENGLKFEEFKKVINQKGQDLLNS-----------------------AKVEYK------------------------------------------------------------------------------
1 PsiBlast_PDB 79.9456% -44 - C8 -1ZK6 - PRSA_BACSU A:[118-205] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IRASHILV------------AD------------------------------------------------------------------------------------------------------------------------K---------------------K----------------------T--AE--EVEKKL-K-K------G-EK-FEDLAKEYSTDSSAS-KGGDLGWFAKEGQM---DETFSKAAFKLKT-GEVS-DP---------VKTQ-YGYHII---KKTE----------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 78.9435% -75 - C8 -3RFW - CBF2_CAMJE A:[110-224] --------------------------------------------------------------------------------------------------------------------------------------------------------------IK----IDAAKVKAFYDQNKDKYVK------------PA-----RVQAKHILV------------AT------------------------------------------------------------------------------------------------------------------------E---------------------K----------------------E--AK--DIINEL-K-GLKGKELD-AK-FSELAKEKSIDPGSKNQGGELGWFDQ-STM---VKPFTDAAFALKNGTITT-TP---------VKTN-FGYHVI-----------------------------------------------------------------------------------------------------------------------------------------------------------
80 HHSearch 78.4837% -64 - C8 -2JZV - PRSA_STAAM A:[141-245] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKKASHILI------------KV------------------------------------------------------------------------------------------------------------------------KSKKSDKEGLDDKEAK------Q----------------------K--AE--EIQKEV-S-KD-----P-SK-FGEIAKKESMDTGSAKKDGELGYVLK-GQT---DKDFEKALFKLK-DGEVS-EV---------VKSS-FGYHIIKADK-------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 76.5636% -92 - C8 -3UI5 PIN4_HUMAN A:[8-97] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKVRHILC------------EK------------------------------------------------------------------------------------------------------------------------H---------------------G----------------------K--IM--EAMEKL-K-S------G-MR-FNEVAAQYSEDKA--RQGGDLGWMTR-GSM---VGPFQEAAFAL----PVS-GMDKPVFTDPPVKTK-FGYHIIMV---------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 76.3736% -92 - C8 -3UI6 PIN4_HUMAN A:[8-97] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKVRHILC------------EK------------------------------------------------------------------------------------------------------------------------H---------------------G----------------------K--IM--EAMEKL-K-S------G-MR-FNEVAAQYSEDKA--RQGGDLGWMTR-GSM---VGPFQEAAFAL----PVS-GMDKPVFTDPPVKTK-FGYHIIMV---------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 76.3145% -74 - C8 -2RQS - ? A:[10-94] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKCSHILV------------KK------------------------------------------------------------------------------------------------------------------------Q---------------------G----------------------E--AL--AVQERL-K-A------G-EK-FGKLAKELSIDGGSAKRDGSLGYFGR-GKM---VKPFEDAAFRLQ-VGEVS-EP---------VKSE-FGYHVIK----------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 76.0734% -68 - C8 -1M5Y - SURA_ECOLI A:[284-389] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVHARHILLKPSPIMT-----DE------------------------------------------------------------------------------------------------------------------------Q---------------------A----------------------R--VKLEQIAADI-K-S------G-KTTFAAAAKEFSQDPGSANQGGDLGWATP-DIF---DPAFRDALTRL-NKGQMS-AP---------VHSS-FGWHLIELL--------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 75.2135% -78 - C8 -4G2P ? A:[8-105] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVHARHILLKPSPIMN-----DQ------------------------------------------------------------------------------------------------------------------------Q---------------------A----------------------R--LKLEEIAADI-K-S------G-KTTFAAAAKEYSQDPGSANQGGDLGWATP-DIF---DPAFRDALTKL-HKGQIS-AP---------VHSS-FGWHLIELL--------------------------------------------------------------------------------------------------------------------------------------------------------
77 HHSearch 74.2428% -45 - C8 -2PV1 A:[2-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELNLSHILI------------PLPENPTSDQVNEA------------------------------------------------------------------------------------------------------------E---------------------S----------------------Q--AR--AIVDQA-R-N------G-AD-FGKLAIAHSADQ-QALNGGQMGWGRI-QEL---PGIFAQALSTAK-KGDIV-GP---------IRSG-VGFHILKVNDLR-----------------------------------------------------------------------------------------------------------------------------------------------------
84 HHSearch 73.6630% -69 - C8 -3TC5 PIN1_HUMAN A:[56-166] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A------RVRCSHLLV------------KH------------------------------------------------------------------------------------------------------------------------SQSRRPSSWRQEKITRTKEEALE----------------------L--IN--GYIQKI-K-S------GEED-FESLASQFSDCS-SAKARGDLGAFSR-GQM---QKPFEDASFALR-TGEMS-GP---------VFTD-SGIHIILRTE-------------------------------------------------------------------------------------------------------------------------------------------------------
75 HHSearch 73.2530% -50 - C8 -1JNS - PPIC_ECOLI A:[3-91] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAALHILV------------KE------------------------------------------------------------------------------------------------------------------------E---------------------K----------------------L--AL--DLLEQI-K-N------G-AD-FGKLAKKHSICP-SGKRGGDLGEFRQ-GQM---VPAFDKVVFSCP-VLEPT-GP---------LHTQ-FGYHIIKVLYR------------------------------------------------------------------------------------------------------------------------------------------------------
78 HHSearch 72.9124% -59 - C8 -3GPK ? A:[6-105] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------E------EYRIGEIFL------------AA------------------------------------------------------------------------------------------------------------------------TEENKPQVF-------------A----------------------N--AE--KIVEQL-K-Q------G-GS-FVAYARQYSEAS-TAAVGGDLGWIRL-AQL---PTELATTAASMG-PGQLA-GP---------VEIR-GGFSILYLIDKRE----------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 72.6540% -41 - C8 -2JZV - PRSA_STAAM A:[161-242] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LD------------DK------------------------------------------------------------------------------------------------------------------------E---------------------A----------------------KQKAE--EIQKEVSK-D------P-SK-FGEIAKKESMDTGSAKKDGELGYVLK-GQT---DKDFEKALFKLKD-GEVS-EV---------VKSS-FGYHIIK----------------------------------------------------------------------------------------------------------------------------------------------------------
72 HHSearch 72.2123% -28 - C8 -1YW5 - ? A:[11-177] --------------------------------------------------------------------------------------------------------------------NWTIRVSR-SH-NKEYFLNQSTNESSWDPP-------------Y----GTDKEVLNAY-----IAKFKNNGYKPLVNEDG------QVRVSHLLI------------KN------------------------------------------------------------------------------------------------------------------------N---------------------QSRKPKSWKSPDGISRTRDESIQI--LK--KHLERI-L-S------GEVK-LSELANTESDCS-SHDRGGDLGFFSK-GQM---QPPFEEAAFNLH-VGEVS-NI---------IETN-SGVHILQRTG-------------------------------------------------------------------------------------------------------------------------------------------------------
69 HHSearch 72.2020% -29 - C7 -3RGC - ? A:[22-271] --------------------------AIAVVVDKEPITTYDIDQTMKALKI--------------DRNKALGVLINEKMEISQMKQLGIVVNDLELDDAINKMLAQNK---TTLN-AFKANLKS----SYEQFRTNFKKDLEKRKLYEKIASMA---KTD----FSDDGAKKFF-----EQNK------------DKFTFYTQINANIYLS------------NN------------------------------------------------------------------------------------------------------------------------P---------------------Q----------------------T--LE--NIKNTK-K---------------TILKP---------QN---ASLNT-SNA---DPRLLGLLSQIP-VGSFS-PV---------LNGK-NGYELYEVKSKDG--TQTP-EYEQVKNEVLNAYVSEQRQ-NFIQDYFDKLRSKINIEYLR-----------------------------------------------------------------------------------------------------