@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Rv3559c: (2016-05-21 )
MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVISDHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAGLGGQTPVADMTDDEWDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIARHKFLDKTASAELLDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP

Atome Classification :

(20 SA) .........10........20........30........40........-50........60........70........80........90........100....-...110-........120--.........130.......140.......150.......160.......170.......180.......190.......200..---...---..210..----------....----...220.......230.......240.......250.......260
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNLSVAPKEIAGHGLLDGKVVVVTAAAGTGIGSATARRALAEGADVVIS-DHHERRLGETAAELSALGLGRVEHVVCDVTSTAQVDALIDSTTARMGRLDVLVNNAG-LGGQT--PVADMTDDE----WDRVLDVSLTSVFRATRAALRYFRDAPHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAAEYGVRINAVSPSIAR---HKF---LDK--TA----------SAEL----LDRLAAGEAFGRAAEPWEVAATIAFLASDYSSYLTGEVISVSCQHP
117 HHSearch 90.4085% -94 - C2 -3O38 - ? A:[6-265] -NLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS-DYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG-LGGQT--PVVDMTDEE----WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR---H------------------------------------DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQR-
1 PsiBlast_PDB 89.6385% -94 - C2 -3O38 - ? A:[6-264] -NLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS-DYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG-LGGQT--PVVDMTDEE----WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIAR---H------------------------------------DEAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ--
21 PsiBlast_CBE 89.4485% -95 - C2 -3O38 ? C:[5-264] MNLSEAPKEIDGHGLLKGKVVLVTAAAGTGIGSTTARRALLEGADVVIS-DYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRLDVLVNNAG-LGGQT--PVVDMTDEE----WDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWRAQHSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSI-------------------------------------------EAFGRAAEPWEVAATIAFLASDYSSYMTGEVVSVSSQ--
134 HHSearch 65.9833% -78 - C2 -3WDS ? A:[7-260] ------------IFDLSGRKAIVTGGSK-GIGAAIARALDKAGATVAIA-DLDVMAAQAVVAGLE----NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLLCANAG-VSTMR--PAVDITDEE----WDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGAPLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVK---TAM---QER--EIIWEAELRGMTPEAV----RAEYVSLTPLGRIEEPEDVADVVVFLASDAARFMTGQGINVTGGV-
60 PsiBlast_CBE 65.2534% -92 - C2 -4WK6 ? B:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNAG-ITRDN--LLMRMKEEE----WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVASVVGTM----QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA---LND--EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
100 PsiBlast_CBE 64.6034%-104 - C2 -3TZC ? B:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNA----------------------WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVVG-------ANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT----------EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
19 PsiBlast_PDB 64.3434% -90 - C2 -4WK6 ? A:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNAG-ITRDN--LLMRMKEEE----WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVASVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA---LND--EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
58 PsiBlast_CBE 63.5434% -95 - C2 -4WK6 ? D:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNAG-IT-----LLMRMKEEE----WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVAS---------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA---LND--EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
4 PsiBlast_PDB 63.1740% -85 - C2 -4NBV ? A:[3-241] ---------------LQGRVAIITGAA-AGIGFATAQRFAEDGAIVVLC-DVQEARVREAAARLAATGA-TVSAYRVDVTRRDEVDAMVAAVLAAHQRVDILVNNAG-ITKDA--RLAKMTEAQ----FDAVIDVNLKGVFNCAQAVAGLMTEQGK-GVILNASSVVGLYGNFGQTNYAASKFGVIGFTKTWARELGPKGVRVNAVCPGFVN---TEI---L-Q--TV----------PDKV----LDGMTSSCWLRRLAEPAEIASIYAFLASDDASYVNGVAIEAS----
98 PsiBlast_CBE 62.3734%-100 - C2 -3TZC ? D:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNA-----------------E----WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVGSVV--------ANFAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK-----ND--EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
121 HHSearch 62.3535% -85 - C2 -3TZQ ? B:[7-250] -------------AELENKVAIITGACG-GIGLETSRVLARAGARVVLA-DLPETDLAGAAASV----GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIVDNNAA-HSDPADMLVTQMTVDV----WDDTFTVNARGTMLMCKYAIPRLISA-GGGAIVNISSATAHAAYDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVR---TPR---LE---------------PQPI----VDIFATHHLAGRIGEPHEIAELVCFLASDRAAFITGQVIAADSGL-
62 PsiBlast_CBE 62.1234%-101 - C2 -4WJZ FABG_VIBCH B:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNA----------------------WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVASVVG-------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMT----------EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
35 PsiBlast_CBE 62.1237% -85 - C2 -4WEC ? D:[28-266] ---------------LAGKVAVITGGA-SGIGLATGRRLRAEGATVVVG-DIDPTTGKAAADELEGL------FVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAG-I--SP--PEDDLIENTDLPAWQRVQDINLKSVYLSCRAALRHMVPAGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVN---TPL---LQELFAK----------DPER----AARRLVHIPLGRFAEPEELAAAVAFLASDDASFITGSTFLV-----
14 PsiBlast_PDB 62.0837% -76 - C2 -4FN4 ? A:[5-247] ---------------LKNKVVIVTGA-GSGIGRAIAKKFALNDSIVVAV-ELLEDRLNQIVQELRGMG-KEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVT--PVAEVSDEL----WERVLAVNLYSAFYSSRAVIPIMLKQGKG-VIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVK---TNIG--LGS--SK----------PSELGMRTLTKLMSLSS--RLAEPEDIANVIVFLASDEASFVNGDAVVV-----
48 PsiBlast_CBE 61.8537% -75 - C2 -4FN4 ? B:[5-247] ---------------LKNKVVIVTGA-GSGIGRAIAKKFALNDSIVVAV-ELLEDRLNQIVQELRGMG-KEVLGVKADVSKKKDVEEFVRRTFETYSRIDVLCNNAGIMDGVT--PVAEVSDEL----WERVLAVNLYSAFYSSRAVIPIMLKQGKG-VIVNTASIAGIRGGFAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVK---TNIG--LGS--SK----------PSELGMRTLTKLMSLSS--RLAEPEDIANVIVFLASDEASFVNGDAVVV-----
36 PsiBlast_CBE 61.5937% -85 - C2 -4WEC ? C:[28-266] ---------------LAGKVAVITGGA-SGIGLATGRRLRAEGATVVVG-DIDPTTGKAAADELEGL------FVPVDVSEQEAVDNLFDTAASTFGRVDIAFNNAG-I--SP--PEDDLIENTDLPAWQRVQDINLKSVYLSCRAALRHMVPAGKGSIINTASFVAVMGSATSQISYTASKGGVLAMSRELGVQYARQGIRVNALCPGPVN---TPL---LQELFAK----------DPER----AARRLVHIPLGRFAEPEELAAAVAFLASDDASFITGSTFLV-----
59 PsiBlast_CBE 61.4734% -92 - C2 -4WK6 ? C:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNAG-ITRDN--LLMRMKEEE----WSDIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVASVVG------QANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKA---LND--EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
61 PsiBlast_CBE 61.2134%-101 - C2 -4WJZ FABG_VIBCH D:[10-245] ---------------LEGKVALVTGAS-RGIGKAIAELLAERGAKVIGT-ATSESGAQAISDYLGDNGKG----MALNVTNPESIEAVLKAITDEFGGVDILVNNA------------------------DIMETNLTSIFRLSKAVLRGMMKKRQ-GRIINVASVV--------ANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTK-----ND--EQ----------RTAT----LAQVPA----GRLGDPREIASAVAFLASPEAAYITGETLHVN----
5 PsiBlast_PDB 60.9436% -80 - C2 -2UVD - ? A:[1-240] --------------MLKGKVALVTGAS-RGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAI-AVRADVANAEDVTNMVKQTVDVFGQVDILVNNAG-VTKDN--LLMRMKEEE----WDTVINTNLKGVFLCTKAVSRFMMRQRHGR-IVNIASVVGVTGNPGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIA---TDMTDVLDE--NI----------KAEM----LKLIPAAQ-FG---EAQDIANAVTFFASDQSKYITGQTLNV-----
127 HHSearch 60.5030% -81 - C2 -3GAF - ? A:[5-251] -----------SPFHLNDAVAIVTGAAA-GIGRAIAGTFAKAGASVVVT-DLKSEGAEAVAAAIRQ-AGGKAIGLECNVTDEQHREAVIKAALDQFGKITVLVNNAG-GGGPK--PF-DMPMSD----FEWAFKLNLFSLFRLSQLAAPHMQKA-GGGAILNISSMAGENTNVRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIK---TDA---LAT--VL----------TPEI----ERAMLKHTPLGRLGEAQDIANAALFLCSPAAAWISGQVLTVSGGGV