@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00074_RNS_BO: (2014-08-21 )
MALKSLVVLPLLVLVLLLVRVQPSLGKESAAAKFERQHMDSGNSPSSSSNYCNLMMCCRKMTQGKCKPVNTFVHESLADVKAVCSQKKVTCKNGQTNCYQSKSTMRITDCRETGSSKYPNCAYKTTQVEKHIIVACGGKPSVPVHFDASV

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UPA_B_7(11BA)
RNS_BOVIN
[Raw transfer]



U2P_B_4(3DJO)
RNS_BOVIN
[Raw transfer]



UPA_A_6(11BA)
RNS_BOVIN
[Raw transfer]



C3P_A_3(3DJV)
RNS_BOVIN
[Raw transfer]



0EY_A_3(4G8V)
RNAS1_BOVIN
[Raw transfer]



UA3_A_3(3DJP)
RNS_BOVIN
[Raw transfer]



0FT_A_3(4G8Y)
RNAS1_BOVIN
[Raw transfer]



CPA_C_3(1R5C)
RNS_BOVIN
[Raw transfer]



UDP_B_4(3DJQ)
RNS_BOVIN
[Raw transfer]



U2G_K_11(11BG)
RNS_BOVIN
[Raw transfer]



UA3_B_4(3DJP)
RNS_BOVIN
[Raw transfer]



CPA_D_4(1R5C)
RNS_BOVIN
[Raw transfer]



U2P_A_3(3DJO)
RNS_BOVIN
[Raw transfer]



C5P_B_4(3DJX)
RNS_BOVIN
[Raw transfer]



UDP_A_3(3DJQ)
RNS_BOVIN
[Raw transfer]



U5P_B_4(3JW1)
RNAS1_BOVIN
[Raw transfer]



U2G_N_14(11BG)
RNS_BOVIN
[Raw transfer]



C3P_B_4(3DJV)
RNS_BOVIN
[Raw transfer]



C5P_A_3(3DJX)
RNS_BOVIN
[Raw transfer]



0G0_A_3(4G90)
RNAS1_BOVIN
[Raw transfer]



GOL_A_7(3MWQ)
RNAS1_BOVIN
[Raw transfer]



T3P_A_2(3LXO)
RNAS1_BOVIN
[Raw transfer]



GOL_A_8(3MWQ)
RNAS1_BOVIN
[Raw transfer]



GOL_A_5(2P7S)
AMPS2_RANPI
[Raw transfer]



IPA_B_5(3EV2)
RNAS1_BOVIN
[Raw transfer]



U2G_M_13(11BG)
RNS_BOVIN
[Raw transfer]



ADT_A_3(8RSA)
RNAS1_BOVIN
[Raw transfer]



HEZ_A_3(3EV1)
RNAS1_BOVIN
[Raw transfer]



ADT_B_4(8RSA)
?
[Raw transfer]



HEZ_B_6(3EV1)
RNAS1_BOVIN
[Raw transfer]



ETF_A_3(3EV4)
RNAS1_BOVIN
[Raw transfer]



DMS_A_3(3EV0)
RNAS1_BOVIN
[Raw transfer]



TBU_B_3(3EV3)
?
[Raw transfer]



HEZ_A_5(3EV1)
RNAS1_BOVIN
[Raw transfer]



ETF_A_5(3EV4)
RNAS1_BOVIN
[Raw transfer]



ADU_B_4(9RSA)
RNAS1_BOVIN
[Raw transfer]



ADU_A_3(9RSA)
RNAS1_BOVIN
[Raw transfer]
11 PsiBlast_PDB 94.98100% -87 - C8 -3DJX 4.1 RNS_BOVIN
10 PsiBlast_PDB 93.83100% -87 - C8 -3DJV 3.8 RNS_BOVIN
5 PsiBlast_PDB 93.71100% -92 - C8 -1R5C 6.7 RNS_BOVIN
30 PsiBlast_CBE 93.54100% -95 - C8 -11BA 7.1 RNS_BOVIN
3 PsiBlast_PDB 93.45100% -84 - C8 -11BG 5.5 RNS_BOVIN
8 PsiBlast_PDB 93.35100% -87 - C8 -3DJP 3.0 RNS_BOVIN
7 PsiBlast_PDB 93.06100% -86 - C8 -3DJO 4.2 RNS_BOVIN
2 PsiBlast_PDB 92.56100% -93 - C8 -11BA 7.5 RNS_BOVIN
26 PsiBlast_CBE 92.25100% -90 - C8 -1R5C 6.5 RNS_BOVIN
9 PsiBlast_PDB 92.13100% -90 - C8 -3DJQ 3.4 RNS_BOVIN
21 PsiBlast_CBE 91.85100% -78 - C8 -3DJX 4.2 RNS_BOVIN
75 PsiBlast_CBE 91.5481% -90 - C8 -3EV2 3.9 RNAS1_BOVIN
25 PsiBlast_CBE 91.51100% -85 - C8 -3DJO 3.6 RNS_BOVIN
24 PsiBlast_CBE 91.47100% -82 - C8 -3DJP 3.9 RNS_BOVIN
22 PsiBlast_CBE 90.55100% -79 - C8 -3DJV 3.3 RNS_BOVIN
23 PsiBlast_CBE 90.15100% -79 - C8 -3DJQ 3.4 RNS_BOVIN
73 PsiBlast_CBE 90.0781% -95 - C8 -3EV4 3.0 RNAS1_BOVIN
65 PsiBlast_CBE 89.9881% -88 - C8 -3JW1 4.5 RNAS1_BOVIN
80 PsiBlast_CBE 89.9081% -85 - C8 -3EV0 3.5 RNAS1_BOVIN
59 PsiBlast_CBE 89.8781% -86 - C8 -4G90 5.1 RNAS1_BOVIN
60 PsiBlast_CBE 89.7381% -87 - C8 -4G8Y 5.5 RNAS1_BOVIN
29 PsiBlast_CBE 89.68100% -86 - C8 -11BG 4.8 RNS_BOVIN
61 PsiBlast_CBE 89.1281% -85 - C8 -4G8V 4.8 RNAS1_BOVIN
77 PsiBlast_CBE 88.9681% -90 - C8 -3EV1 2.7 RNAS1_BOVIN
74 PsiBlast_CBE 88.9381% -92 - C8 -3EV3 3.9 ?
79 PsiBlast_CBE 88.7981% -91 - C8 -3EV0 - RNAS1_BOVIN
78 PsiBlast_CBE 88.5281% -89 - C8 -3EV1 3.2 RNAS1_BOVIN
101 HHSearch 88.5181% -84 * C8 *3MWQ 3.3 RNAS1_BOVIN
41 PsiBlast_CBE 88.2981% -84 - C8 -8RSA 3.4 ?
50 PsiBlast_CBE 88.2481% -81 - C8 -4J67 - ?
39 PsiBlast_CBE 88.2481% -89 - C8 -9RSA 2.0 RNAS1_BOVIN
64 PsiBlast_CBE 87.8781% -85 - C8 -3LXO 4.6 RNAS1_BOVIN
48 PsiBlast_CBE 87.7381% -85 - C8 -4J69 - ?
42 PsiBlast_CBE 87.4281% -81 - C8 -8RSA 3.2 RNAS1_BOVIN
40 PsiBlast_CBE 87.1681% -78 - C8 -9RSA 2.0 RNAS1_BOVIN
111 HHSearch 56.1531% -78 - C8 -2P7S 2.4 AMPS2_RANPI