@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0570: (2015-12-02 )
MYVVIINIVLLKVLMVLTITILSGGFSRERKISLMSGKAVKKALDSLSYNAIEIDVNSNTAEKLKKINPDLAFIALHGPYGEDGCIQGLLEILGIKYTHSGVMASAIAMNKAMSKHIFRSLGIDTPKGYIISRGDILKNNIKIDYPYVLKPINEGSSIGVHITFSHEDYLKLKNMFSVIPVHDAGIEEEEPVWITRDLMIIEEYIPGIELHTAVLLDEAAGTMEIRPKNKFYDYKAKYTNGFAEHIFPAEIPDNIYEMTLEHALKVHRFLGCKTISRSDFRYNPKDNTLKMLEINTHPGFTELSLVPEIAKLTKGIDFNELVKIIIEDSLQHKKILEIK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_3(4C5C)
DDLB_ECOLI
[Raw transfer]



ATP_B_11(4C5C)
DDLB_ECOLI
[Raw transfer]



DS0_B_11(4C5A)
DDLB_ECOLI
[Raw transfer]



DS0_A_5(4C5A)
DDLB_ECOLI
[Raw transfer]



ADP_A_5(1IOV)
DDLB_ECOLI
[Raw transfer]



ADP_A_4(2DLN)
DDLB_ECOLI
[Raw transfer]



PHY_A_5(1IOW)
DDLB_ECOLI
[Raw transfer]



ADP_B_12(4C5B)
DDLB_ECOLI
[Raw transfer]



PHY_A_4(1E4E)
VANA_ENTFC
[Raw transfer]



ATP_A_6(3R5X)
DDL_BACAN
[Raw transfer]



ATP_A_6(3R5X)
DDL_BACAN
[Raw transfer]



PHY_A_5(1IOW)
?
[Raw transfer]



DAL_A_4(4C5B)
DDLB_ECOLI
[Raw transfer]



DAL_A_5(4C5B)
DDLB_ECOLI
[Raw transfer]
6 PsiBlast_PDB 90.4433% -81 - C1 -1IOW 4.2 DDLB_ECOLI
23 PsiBlast_CBE 89.7334% -79 - C1 -4C5A 3.1 DDLB_ECOLI
22 PsiBlast_CBE 89.6534% -80 - C1 -4C5B 7.5 DDLB_ECOLI
5 PsiBlast_PDB 89.5634% -81 - C1 -4C5C 8.1 DDLB_ECOLI
4 PsiBlast_PDB 89.4034% -79 - C1 -4C5B 3.1 DDLB_ECOLI
3 PsiBlast_PDB 89.0834% -79 - C1 -4C5A 3.2 DDLB_ECOLI
2 PsiBlast_PDB 88.5034% -80 - C1 -2DLN 6.7 DDLB_ECOLI
21 PsiBlast_CBE 87.8234% -78 - C1 -4C5C 8.5 DDLB_ECOLI
8 PsiBlast_PDB 87.6332% -94 - C1 -3R23 - DDL_BACAN -
9 PsiBlast_PDB 87.4532% -98 - C1 -3R5X 6.4 DDL_BACAN
10 PsiBlast_PDB 86.7633% -88 - C1 -4EG0 - DDL_BURA4 -
11 PsiBlast_PDB 86.6032% -91 - C1 -4EGJ - DDL_BURXL -
36 HHSearch 86.5328% -78 - C1 -1E4E 5.0 VANA_ENTFC
30 HHSearch 86.1928% -78 - C1 -3TQT - DDL_COXBU -
1 PsiBlast_PDB 86.1734% -81 - C1 -1IOV 6.3 DDLB_ECOLI
24 PsiBlast_CBE 85.0933% -96 - C1 -3V4Z - DDL_YERPE -
33 HHSearch 84.2328% -73 * C1 *3I12 - DDLA_SALTY -
7 PsiBlast_PDB 84.1333% -90 - C1 -3V4Z - DDL_YERPE -
32 HHSearch 83.1029% -74 - C1 -2I87 - DDL_STAAC -
25 PsiBlast_CBE 83.0333% -85 - C1 -4EG0 - DDL_BURA4 -
39 HHSearch 79.8433% -80 - C1 -3R5X 6.4 DDL_BACAN
52 Fugue 62.9630% -77 - C1 -1IOW Error ?