@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1940: (2016-03-30 )
MTKGTPHIQPNGVKIAKTVLMPGDPLRAKYIADNFLENVEQFNDVRNMFGYTGTYKGKEVSVMGSGMGIPSIGIYSYELYNFFDVDTIIRIGSCGALQENVNLYDVIIAQAASTNSNYVDQYNIPGHFAPIADFELVTKAKNVADQIGATTHVGNVLSSDTFYNADPTFNDAWKKMGILGIEMESAGLYLNAIHAGKKALGIFTVSDHILRDEATTPEERQNSFTQMMEIALEIAE

Atome Classification :

(48 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMC_A_4(3UT6)
DEOD_ECOLI
[Raw transfer]




ADN_Q_17(1PK7)
DEOD_ECO57
[Raw transfer]




2FA_M_13(1PK9)
DEOD_ECO57
[Raw transfer]




XYA_Q_17(1PR6)
DEOD_ECO57
[Raw transfer]




2FA_Q_17(1PK9)
DEOD_ECO57
[Raw transfer]




FMC_C_9(3UT6)
DEOD_ECOLI
[Raw transfer]




ADN_A_2(3UAW)
DEOD_BACCE
[Raw transfer]




FMC_B_6(3UT6)
DEOD_ECOLI
[Raw transfer]




2FA_O_15(1PK9)
DEOD_ECO57
[Raw transfer]




ADN_M_13(1PK7)
DEOD_ECO57
[Raw transfer]




RAB_M_13(1PW7)
DEOD_ECO57
[Raw transfer]




RAB_O_15(1PW7)
DEOD_ECO57
[Raw transfer]




RAB_Q_17(1PW7)
DEOD_ECO57
[Raw transfer]




XYA_O_15(1PR6)
DEOD_ECO57
[Raw transfer]




2FD_M_13(1PKE)
DEOD_ECO57
[Raw transfer]




FMB_A_5(1A69)
DEOD_ECOLI
[Raw transfer]




2FD_G_7(1Z34)
?
[Raw transfer]




2FD_Q_17(1PKE)
DEOD_ECO57
[Raw transfer]




2FD_O_15(1PKE)
DEOD_ECO57
[Raw transfer]




FMB_B_7(1A69)
DEOD_ECOLI
[Raw transfer]




FMB_C_9(1A69)
DEOD_ECOLI
[Raw transfer]




ADN_O_15(1PK7)
DEOD_ECO57
[Raw transfer]




6MP_Q_17(1OU4)
DEOD_ECOLI
[Raw transfer]




6MP_M_13(1OTY)
DEOD_ECOLI
[Raw transfer]




6MP_M_13(1OU4)
DEOD_ECOLI
[Raw transfer]




6MP_Q_17(1OTY)
DEOD_ECOLI
[Raw transfer]




6MP_O_15(1OTY)
DEOD_ECOLI
[Raw transfer]




6MP_O_15(1OU4)
DEOD_ECOLI
[Raw transfer]




TRS_M_13(1JE0)
PNPH_SULSO
[Raw transfer]




3 PsiBlast_PDB 92.8953%-107 - C3 -1VHJ - DEOD1_VIBCH -
94 PsiBlast_CBE 92.8552%-105 - C3 -1K9S - DEOD_ECOLI -
23 PsiBlast_CBE 92.4053%-102 - C3 -1VHW - DEOD1_VIBCH -
87 PsiBlast_CBE 92.3952%-108 - C3 -3ONV - DEOD_ECOLI -
79 PsiBlast_CBE 92.3352%-108 - C3 -3OOH - DEOD_ECOLI -
24 PsiBlast_CBE 92.2853%-104 - C3 -1VHW - DEOD1_VIBCH -
58 PsiBlast_CBE 92.0452%-101 - C3 -4RJ2 - ? -
60 PsiBlast_CBE 91.8852%-101 - C3 -4RJ2 - ? -
25 PsiBlast_CBE 91.8753%-100 - C3 -1VHW - DEOD1_VIBCH -
78 PsiBlast_CBE 91.8552%-103 - C3 -3OOH - DEOD_ECOLI -
96 PsiBlast_CBE 91.8452%-104 - C3 -1K9S - DEOD_ECOLI -
8 PsiBlast_PDB 91.7652%-103 - C3 -1K9S - DEOD_ECOLI -
4 PsiBlast_PDB 91.6853%-101 - C3 -1VHW - DEOD1_VIBCH -
54 PsiBlast_CBE 91.6752%-105 - C3 -4TS3 - ? -
28 PsiBlast_CBE 91.6753%-102 - C3 -3OF3 - DEOD1_VIBCH -
104 PsiBlast_CBE 91.6552%-112 - C3 -1A69 4.1 DEOD_ECOLI
33 PsiBlast_CBE 91.5953%-101 - C3 -3OF3 - DEOD1_VIBCH -
67 PsiBlast_CBE 91.5452%-103 - C3 -3OOH - DEOD_ECOLI -
31 PsiBlast_CBE 91.4353%-101 - C3 -3OF3 - DEOD1_VIBCH -
22 PsiBlast_CBE 91.4053%-101 - C3 -1VHW - DEOD1_VIBCH -
19 PsiBlast_PDB 91.3152%-110 - C3 -1A69 4.4 DEOD_ECOLI
63 PsiBlast_CBE 91.0552%-104 - C3 -3UT6 4.1 DEOD_ECOLI
106 PsiBlast_CBE 91.0352%-106 - C3 -1PW7 4.1 DEOD_ECO57
101 PsiBlast_CBE 91.0152%-102 - C3 -1OU4 3.5 DEOD_ECOLI
10 PsiBlast_PDB 91.0152%-103 - C3 -1PK9 5.3 DEOD_ECO57
103 PsiBlast_CBE 91.0052%-104 - C3 -1OTY 3.4 DEOD_ECOLI
102 PsiBlast_CBE 90.8852%-103 - C3 -1OTY 3.5 DEOD_ECOLI
20 PsiBlast_PDB 90.8652%-101 - C3 -1OTY 3.6 DEOD_ECOLI
108 PsiBlast_CBE 90.6752%-102 - C3 -1PW7 4.3 DEOD_ECO57
107 PsiBlast_CBE 90.6652%-104 - C3 -1PW7 4.3 DEOD_ECO57
62 PsiBlast_CBE 90.6252%-103 - C3 -3UT6 4.4 DEOD_ECOLI
110 PsiBlast_CBE 90.5752%-107 - C3 -1PR6 4.7 DEOD_ECO57
11 PsiBlast_PDB 90.4552%-103 - C3 -1PKE 4.9 DEOD_ECO57
105 PsiBlast_CBE 90.3652%-105 - C3 -1A69 4.4 DEOD_ECOLI
99 PsiBlast_CBE 90.2252%-106 - C3 -1OU4 3.5 DEOD_ECOLI
89 PsiBlast_CBE 90.2252%-103 - C3 -1PKE 4.5 DEOD_ECO57
9 PsiBlast_PDB 90.2152%-104 - C3 -1PK7 4.7 DEOD_ECO57
92 PsiBlast_CBE 89.9252%-108 - C3 -1PK7 5.0 DEOD_ECO57
91 PsiBlast_CBE 89.9152%-104 - C3 -1PK9 5.3 DEOD_ECO57
90 PsiBlast_CBE 89.5752%-105 - C3 -1PK9 5.5 DEOD_ECO57
15 PsiBlast_PDB 89.4652%-104 - C3 -3UT6 4.9 DEOD_ECOLI
93 PsiBlast_CBE 89.3352%-103 - C3 -1PK7 4.2 DEOD_ECO57
109 PsiBlast_CBE 89.2252%-107 - C3 -1PR6 5.1 DEOD_ECO57
100 PsiBlast_CBE 89.1252%-105 - C3 -1OU4 3.3 DEOD_ECOLI
88 PsiBlast_CBE 87.7652%-108 - C3 -1PKE 5.0 DEOD_ECO57
111 HHSearch 85.8747%-106 - C3 -1Z34 4.6 ?
113 HHSearch 84.8147% -99 - C3 -3UAW 5.1 DEOD_BACCE
119 HHSearch 74.2733%-106 - C3 -1JE0 3.5 PNPH_SULSO