@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : jhp_1112: (2015-12-21 )
MKKTFLIALALTASLIGAENTKWDYKNKENGPHRWDKLHKDFEVCKSGKSQSPINIEHYYHTQDKADLQFKYAASKPKAVFFTHHTLKASFEPTNHINYRGHDYVLDNVHFHAPMEFLINNKTRPLSAHFVHKDAKGRLLVLAIGFEEGKENPNLDPILEGIQKKQNLKEVALDAFLPKSINYYHFNGSLTAPPCTEGVAWFVIEEPLEVSAKQLAEIKKRMKNSPNQRPVQPDYNTVIIKSSAETR

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LSA_A_3(4RIV)
CAH2_HUMAN
[Raw transfer]




SUA_A_4(3K34)
CAH2_HUMAN
[Raw transfer]




SAN_A_4(4COQ)
?
[Raw transfer]




ETS_A_4(3FW3)
CAH4_HUMAN
[Raw transfer]




SAN_B_11(4COQ)
?
[Raw transfer]




AZM_B_6(4G7A)
?
[Raw transfer]




AZM_A_4(4G7A)
?
[Raw transfer]




ACY_A_8(1Y7W)
?
[Raw transfer]




ACY_A_11(1KEQ)
CAH5A_MOUSE
[Raw transfer]




28 PsiBlast_CBE 98.7599% -94 - C8 -4YGF - ? -
21 PsiBlast_CBE 97.9599% -94 - C8 -4YHA - ? -
27 PsiBlast_CBE 97.6199% -93 - C8 -4YHA - ? -
33 PsiBlast_CBE 97.2599% -91 - C8 -4YGF - ? -
2 PsiBlast_PDB 97.0199% -98 - C8 -4YHA - ? -
34 PsiBlast_CBE 96.9999% -94 - C8 -4YGF - ? -
26 PsiBlast_CBE 96.5899% -91 - C8 -4YHA - ? -
32 PsiBlast_CBE 96.3599% -97 - C8 -4YGF - ? -
35 PsiBlast_CBE 96.3398% -96 - C8 -4XFW - ? -
25 PsiBlast_CBE 96.2199% -94 - C8 -4YHA - ? -
24 PsiBlast_CBE 96.1399% -92 - C8 -4YHA - ? -
1 PsiBlast_PDB 96.1299% -95 - C8 -4YGF - ? -
3 PsiBlast_PDB 95.8498% -96 - C8 -4XFW - ? -
31 PsiBlast_CBE 95.4999% -96 - C8 -4YGF - ? -
23 PsiBlast_CBE 93.4899% -98 - C8 -4YHA - ? -
18 PsiBlast_PDB 77.6227% -86 - C8 -4ZWZ - ? -
20 PsiBlast_PDB 77.5127% -82 - C8 -4RIV 3.2 CAH2_HUMAN
14 PsiBlast_PDB 77.0928% -83 - C8 -4Q08 - CAH2_HUMAN -
19 PsiBlast_PDB 76.9027% -86 - C8 -4R59 - CAH2_HUMAN -
15 PsiBlast_PDB 76.6428% -83 - C8 -4Q09 - CAH2_HUMAN -
5 PsiBlast_PDB 75.9138% -86 - C8 -4G7A 3.3 ?
7 PsiBlast_PDB 75.0837% -80 - C8 -4COQ 3.1 ?
42 PsiBlast_CBE 74.8838% -85 - C8 -4G7A 2.7 ?
43 PsiBlast_CBE 73.3637% -81 - C8 -4COQ 3.2 ?