@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2186: (2016-04-01 )
MKKVLVFAAFIVLFSFSFLSTGLTAQAALKDGTYSVDYTVIQGDSDSASMANDYFDKPATVTVNGGKSTVSLQVNHSKWITGLWVEGNAVSVTSKNASSDTRKVSFPVSTLSNPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNTTTPATKSDSSNKVTNPKSSDSSQMFLYGIIFVATGAGLILLKRRAIFK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

HEM_A_11(2O6P)
ISDC_STAA8
[Raw transfer]




HEM_B_12(2O6P)
ISDC_STAA8
[Raw transfer]




HEM_A_11(2O6P)
ISDC_STAA8
[Raw transfer]




HEM_A_11(2O6P)
ISDC_STAA8
[Raw transfer]




GOL_A_10(3QZM)
ISDA_STAAN
[Raw transfer]




22 PsiBlast_CBE 96.4540% -94 - C2 -3SIK - ? -
23 PsiBlast_CBE 96.2939%-107 - C2 -3SZ6 - ? -
31 HHSearch 95.8641%-110 - C2 -3SZ6 - ? -
5 PsiBlast_PDB 94.8839%-110 - C2 -3SZ6 - ? -
4 PsiBlast_PDB 94.7540% -95 - C2 -3SIK - ? -
2 PsiBlast_PDB 90.3937%-104 - C2 -4H8P - ? -
1 PsiBlast_PDB 90.0936% -79 - C2 -2O6P 10.8 ISDC_STAA8
29 HHSearch 88.5838% -79 - C2 -2O6P 10.8 ISDC_STAA8
21 PsiBlast_CBE 88.1636% -93 - C2 -2O6P 11.4 ISDC_STAA8
49 Fugue 87.7036% -71 - C2 -2O6P 10.8 ISDC_STAA8
3 PsiBlast_PDB 84.6237%-103 - C2 -4H8Q - ? -
18 PsiBlast_PDB 81.1124% -68 - C2 -2O1A - ISDA_STAAM -
27 HHSearch 80.8419% -88 - C2 -3QUG - ISDH_STAAM -
20 PsiBlast_PDB 79.7123% -71 - C2 -3QZO - ISDA_STAAN -
19 PsiBlast_PDB 79.3723% -65 - C2 -3QZM - ISDA_STAAN -
33 HHSearch 77.9621% -99 - C2 -3RTL - ISDB_STAAN -
32 HHSearch 77.9518% -75 - C2 -2O1A - ISDA_STAAM -
8 PsiBlast_PDB 77.5623%-102 - C2 -3RTL - ISDB_STAAN -
48 Fugue 77.5218% -74 - C2 -3QZN - ISDA_STAAN -
13 PsiBlast_PDB 77.1627% -62 - C2 -3QUH - ISDH_STAAM -