@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo2446: (2016-04-03 )
MKRRTRKCSLVFILGILIFSCLSGFGTNVFAMDGEYHSPYGDDDLYTVQPTERSPRDPKAGEDVILNITTWPIENGQDVWVEWTKNGVAQENVTAAYDYNSGNNTYWKADLGKFEKGDEITYTTKGSTNGGTAYESGPFTFYVTDWEYVQDVTSVVDNGDSITLNMTATAGDFSPKLYLSFEDLDTLRMELSPTGKETGHAGKSGYTVEDTAEKVTVTTEDLSIEIQKSPYRMEVHQADGTLLTSEYTTANSLGWLTDGKNVINQYQNNFMTPSDEAFYGFGERYDTINQRGKDVETYVYNEYQDQAQTERTYLAVPFFVSANKYGMYVNSDFHSQFQMASKVEDKYSFVLDNDGDMTNMLDYYVISGKDQNDIVNNYTDITGKTTLLPKWAFGLWMSANEWDRESDVSSALSNAKANDIPATGFVLEQWSDEETYYIWNNATYTAKKNGEAFSYDDFTFNGKWTDPKGMVDSVHDAGMNIVLWQVPVLKDDGTVYEQRDNDEEYMISQGYSADDGTGAPYRVPASQWFGNGILLDFTNKDAVDWWTSQREYLLTEVGIDGFKTDGGEMVWGRDTTFSNGEKGQEMRNRYPTDYVSSYFDFAKSINPEAVSFSRSGTSGAQKSGIYWSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGFTGDYPTAELYKRATAMAAFAPIMQFHSEKSDPSPSEERSPWNAVARTGDETILPTFQKYLYTRMNLLPYIYTAAKDTADNGKSMMRQMAMDYPEDVNARDLDEQYMFGDDLLVAPIVQEGQTEKEVYLPEGEWVDIWNGGVHPGGETISYYADVDTLPVFAKAGAIIPMNMTDGYQLGQNVGNDLKSYDNLTFRVYPSGDSEYSFYDDVNGGEMRDISVSEDFANEKVSVDLPAMADETTMQVFSTEPTSVTIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAEFGHLTNVTTASDHAGYTGTGFVAGFDAEKEAVEFDIDAVDGASDYTMEVRYSAGVEDATRTVYINGKKQQITLPKTANWDTWNTVEVPVTLQAGNNQVVFDFEADDTAGINFDHVVIKK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLC_A_17(4KWU)
?
[Raw transfer]



FFX_A_7(2XVK)
?
[Raw transfer]
2 PsiBlast_PDB 85.6197% -57 - C1 -4KWU Error ?
1 PsiBlast_PDB 85.2197% -57 * C1 *4KMQ - ? -
43 HHSearch 60.6026% -43 - C1 -2F2H - XYLS_ECOLI -
42 HHSearch 59.8924% -36 - C1 -2XVL - ? -
67 Fugue 59.8421% -38 - C1 -4BA0 - OL4AG_CELJU -
66 Fugue 59.2124% -33 - C1 -1XSJ - XYLS_ECOLI -
3 PsiBlast_PDB 57.4927% -43 - C1 -2F2H - XYLS_ECOLI -
7 PsiBlast_PDB 56.7326% -43 - C1 -1WE5 - XYLS_ECOLI -
4 PsiBlast_PDB 56.3827% -42 - C1 -1XSI - XYLS_ECOLI -
6 PsiBlast_PDB 56.0727% -44 - C1 -1XSK - XYLS_ECOLI -
10 PsiBlast_PDB 55.8226% -47 - C1 -2XVL - ? -
8 PsiBlast_PDB 55.7926% -47 - C1 -2XVG - ? -
9 PsiBlast_PDB 55.5726% -46 - C1 -2XVK 3.4 ?
5 PsiBlast_PDB 55.3227% -39 - C1 -1XSJ - XYLS_ECOLI -
68 Fugue 54.5720% -21 - C1 -2XVL - ? -
46 HHSearch 54.1919% -30 - C1 -3TOP - MGA_HUMAN -
70 Fugue 53.9119% -31 - C1 -2QMJ - MGA_HUMAN -
16 PsiBlast_PDB 53.6623% -45 - C1 -4XPR - ? -
47 HHSearch 53.4820% -31 - C1 -3LPP - SUIS_HUMAN -
69 Fugue 53.2620% -32 - C1 -2G3N - AGLU_SULSO -