@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : gbs1696: (2015-12-10 )
MSDIGIIVVSHSKNIAQGVVDLISEVAKDVSITYVGGTEDGEIGTSFDQVQQIVEQNDKKTLLAFFDLGSAKMNLELVADFSEKNIIINSVPVVEGAYTAAALLQAGADLDSIQSQLAELTINK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_9(3CR3)
DHAM_LACLA
[Raw transfer]
31 HHSearch 98.3554%-135 - C3 -3CT6 - DHAM_LACLA -
2 PsiBlast_PDB 96.8454%-141 - C3 -3CR3 3.9 DHAM_LACLA
1 PsiBlast_PDB 96.5055%-136 - C3 -3CT6 - DHAM_LACLA -
37 HHSearch 62.5821%-145 - C3 -3IPR - ? -
34 HHSearch 61.7312%-117 - C3 -3GDW - ? -
33 HHSearch 61.0317%-116 * C3 *3GX1 - ? -
35 HHSearch 58.8512%-127 - C3 -1PDO - PTNAB_ECOLI -
46 HHSearch 55.7517%-110 - C3 -1UN8 - DHAK_CITFR -
48 HHSearch 55.0617%-124 - C3 -2IU4 - DHAQ_LACLA -
28 Fugue 54.2314% -89 - C3 -3SNK - ? -
38 HHSearch 51.6619%-129 - C3 -3LFH - ? -
26 Fugue 47.5120%-100 - C3 -1RVV - RISB_BACSU -
17 PsiBlast_PDB 44.5525% -81 - C3 -1K8A - RL15_HALMA -
21 Fugue 44.4831% 26 - C3 -3B48 - ? -
30 Fugue 44.3821% -57 - C3 -2V75 - NAB2_YEAST -
18 PsiBlast_PDB 44.3125% -80 - C3 -1K9M - RL15_HALMA -
20 PsiBlast_PDB 44.2925% -80 - C3 -1M1K - RL15_HALMA -
15 PsiBlast_PDB 44.0725% -82 - C3 -1JJ2 - RL15_HALMA -
3 PsiBlast_PDB 43.9534% 2 - C3 -3B48 - ? -
19 PsiBlast_PDB 43.8925% -82 - C3 -1KD1 - RL15_HALMA -