@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv3290c: (2016-05-18 )
MAAVVKSVALAGRPTTPDRVHEVLGRSMLVDGLDIVLDLTRSGGSYLVDAITGRRYLDMFTFVASSALGMNPPALVDDREFHAELMQAALNKPSNSDVYSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIVAFGKKTQVCGVMAGRRVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAADFPAVVLDPRGRGLMCAFSLPTTADRDELIRQLWQRAVIVLPAGADTVRFRPPLTVSTAEIDAAIAAVRSALPVVT

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

P00_A_13(4JEZ)
ARGD_SALTY
[Raw transfer]



PMP_A_3(2CJG)
LAT_MYCTU
[Raw transfer]



P00_A_3(4JEW)
ARGD_SALTY
[Raw transfer]



P00_B_19(4JEW)
ARGD_SALTY
[Raw transfer]



PLP_A_3(2PB2)
ARGD_SALTY
[Raw transfer]



PLP_B_9(4JF1)
ARGD_SALTY
[Raw transfer]



P00_B_18(4JEZ)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4NOG)
?
[Raw transfer]



PLP_A_3(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_B_4(2PB0)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4JF1)
ARGD_SALTY
[Raw transfer]



PLP_B_13(4JEY)
ARGD_SALTY
[Raw transfer]



PLP_A_3(4JEY)
ARGD_SALTY
[Raw transfer]



EDO_A_7(4JEY)
ARGD_SALTY
[Raw transfer]



EDO_B_7(2PB0)
ARGD_SALTY
[Raw transfer]
2 PsiBlast_PDB 99.57100%-113 - C2 -2CJG - LAT_MYCTU -
5 PsiBlast_PDB 99.41100%-113 - C2 -2CJD - LAT_MYCTU -
1 PsiBlast_PDB 99.24100%-113 - C2 -2CIN - LAT_MYCTU -
3 PsiBlast_PDB 98.82100%-112 - C2 -2CJH - LAT_MYCTU -
4 PsiBlast_PDB 98.42100%-114 - C2 -2JJG - LAT_MYCTU -
7 PsiBlast_PDB 97.9699%-113 - C2 -2JJH - LAT_MYCTU -
6 PsiBlast_PDB 97.8899%-113 - C2 -2JJE - LAT_MYCTU -
8 PsiBlast_PDB 96.8199%-111 - C2 -2JJF - LAT_MYCTU -
77 HHSearch 94.6596%-109 - C2 -2CJG 5.0 LAT_MYCTU
89 HHSearch 59.6427% -99 - C2 -4JF1 - ARGD_SALTY -
100 Fugue 58.4729% -95 - C2 -4UOX - PAT_ECOLI -
76 HHSearch 57.7626% -86 - C2 -4Y0H - GABT_PIG -
92 HHSearch 57.5724%-106 - C2 -3DOD - BIOK_BACSU -
84 HHSearch 55.3923%-100 - C2 -1Z7D - OAT_PLAYO -
85 HHSearch 54.0922% -97 - C2 -4WYD - BIOA_MYCTU -
86 HHSearch 53.5528% -89 - C2 -4UOX - PAT_ECOLI -
14 PsiBlast_PDB 53.3628% -91 - C2 -4ZSW - GABT_PIG -
93 HHSearch 52.9422% -93 - C2 -4A6R - ? -
31 PsiBlast_CBE 52.8931% -87 - C2 -1SZK - GABT_ECOLI -
11 PsiBlast_PDB 52.8228% -89 - C2 -1OHY - GABT_PIG -
57 PsiBlast_CBE 44.4731% -84 - C2 -4JEY 4.2 ARGD_SALTY
50 PsiBlast_CBE 43.7531% -84 - C2 -4JEW 6.1 ARGD_SALTY
58 PsiBlast_CBE 43.6331% -84 - C2 -4JEY 4.4 ARGD_SALTY
59 PsiBlast_CBE 43.6131% -84 - C2 -4JEZ 3.0 ARGD_SALTY
56 PsiBlast_CBE 43.5231% -84 - C2 -4JF1 4.2 ARGD_SALTY
53 PsiBlast_CBE 43.3731% -83 - C2 -2PB0 4.3 ARGD_SALTY
52 PsiBlast_CBE 43.1931% -86 - C2 -2PB2 4.2 ARGD_SALTY
49 PsiBlast_CBE 42.8331% -84 - C2 -4JEW 5.4 ARGD_SALTY
60 PsiBlast_CBE 42.8131% -85 - C2 -4JEZ 3.1 ARGD_SALTY
54 PsiBlast_CBE 42.7431% -85 - C2 -2PB0 4.1 ARGD_SALTY
55 PsiBlast_CBE 41.8731% -82 - C2 -4JF1 4.3 ARGD_SALTY