@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1627: (2016-03-26 )
MTKTLTNKLAEKEHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILNKLAMSKVQIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFDAHIDSHLAYLKSISPVPVLAGFGVSSIEHVEKFAHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN

Atome Classification :

(21 SA) --.........10---........20...----.....30........40........50........60........70......---..80---..--....---.--.90........100.......110.......120.......130.......140.......150.......160.......170.......180...-.-...190.......200.......210..-.....-220........230....------.-..------240.......250.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --MTKTLTNKLAE---KEHAAVVTYIMGG----DGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLE---AILN---KL--AMSK---V--QIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFD-A-HIDSHLAYLKSISPVPVLAGFGVSSIEH-VEKFA-HV-CDGVIIGSKVVQMLH------E-EK------TAELGAFLQKAAEVRIKN
2 PsiBlast_PDB 95.9234%-154 - C1 -2EKC - TRPA_AQUAE A:[9-258] --------TELKE---KREKALVSYLMVG----YPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFE---DVLELSETL--RKEF---P--DIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTG---------YE-RIKKKVEEYRELCDKPVVVGFGVSKKEH-AREIG-SF-ADGVVVGSALVKLAG------Q-KK------IEDLGNLVKELKE-----
22 HHSearch 94.2634%-147 - C1 -2EKC - TRPA_AQUAE A:[7-260] ------KFTELKE---KREKALVSYLMVG----YPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFE---DVLE---LS--ETLRKEFP--DIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTG----------YERIKKKVEEYRELCDKPVVVGFGVSKKEH-AREIG-SF-ADGVVVGSALVKLAG------Q-KK------IEDLGNLVKELKEGL---
27 HHSearch 90.8735%-133 * C1 *1RD5 TRPA_MAIZE A:[8-261] ------TMAALMA---KGKTAFIPYITAG----DPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMD---AVLE---ML--REVTPE-L--SCPVVLLSYYKPIM----FRSLAKMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN-P-RVESLIQEVKKVTNKPVAVGFGISKPEH-VKQIAQWG-ADGVIIGSAMVRQLG------E-AASPKQG-LRRLEEYARGMKNAL---
1 PsiBlast_PDB 89.5436%-135 - C1 -1RD5 TRPA_MAIZE A:[2-246] ---SRPVSDTMAALMAKGKTAFIPYITAG----DPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMD---AVLE---MLREVTPE---L--SCPVVLLSYYKPIMFRSLAKMKE----AGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN-P-RVESLIQEVKKVTNKPVAVGFGISKPEH-VKQIA-QWGADGVIIGSAMVRQLG------E-AA------SPKQG-------------
8 PsiBlast_PDB 88.5234%-127 - C1 -2DZP - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPNKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
3 PsiBlast_PDB 88.1536%-132 - C1 -1TJR TRPA_MAIZE A:[11-245] ----------LMA---KGKTAFIPYITAG----DPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMD---AVLE---MLREVTPE---L--SCPVVLLSYYKPIMSRSLAEMKE----AGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVN-P-RVESLIQEVKKVTNKPVAVGFGISKPEH-VKQIA-QWGADGVIIGSAMVRQLG------E-AA------SPKQG-------------
44 Fugue 86.3627%-139 - C1 -2TYS - TRPA_SALTY A:[1-268] MERYENLFAQLND---RREGAFVPFVTLG----DPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLA---LI--REKH---P--TIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAALRHNIAPIFICPPNADDDLLRQVASYGRGYTYLLS---------------PLHHLIEKLKEYHAAPALQGFGISSPEQ-VSAAV-RAGAAGAISGSAIVKIIEKNLASPK-QM------LAELRSFVSAMKAASRA-
14 PsiBlast_PDB 85.9234%-129 - C1 -2DZV - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPAERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
13 PsiBlast_PDB 85.3334%-129 - C1 -2DZT - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVAGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
21 PsiBlast_CBE 85.2836%-135 - C1 -1RD5 TRPA_MAIZE B:[2-246] ---SRPVSDTMAALMAKGKTAFIPYITAG----DPDLATTAEALRLLDGCGADVIELGVPCSDP--DGPIIQASVARALASGTTMD---AVLE---MLREVTPE---L--SCPVVLLSYYKPIMFRSLAKMKE----AGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSV------------P-RVESLIQEVKKVTNKPVAVGFGISKPEH-VKQIA-QWGADGVIIGSAMVRQLG------E-AA------SPKQG-------------
26 HHSearch 84.9828%-131 - C1 -3NAV TRPA_VIBCH A:[17-269] ----------------AQQGAFVPFVTIG----DPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPD---ICFE---LI--AQIRARNP--ETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKGYTYLLSRA--------AN-M-PVHALLERLQQFDAPPALLGFGISEPAQ-VKQAIEAG-AAGAISGSAVVKIIE------T-HLDNPAKQLTELANFTQAMKKAT---
43 Fugue 84.8532%-136 - C1 -1GEQ - TRPA_PYRFU A:[1-248] ------MFK---------DGSLIPYLTAG----DPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFW---IV--KEFR---RHSSTPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLY-------EIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREH-VVSLL-KEGANGVVVGSALVKIIG------EK--------GREATEFLKKKVEELLGI
23 HHSearch 84.8028%-132 - C1 -3VND ? A:[10-266] --------AALKA---QDKGAFVPFVTIG----DPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSS---DCFD---II--TKVRAQHP--DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAPPNADADTLKMVSEQGEGYTYLLSRAGVT----------PIENILTQLAEFNAPPPLLGFGIAEPEQ-VRAAIKAG-AAGAISGSAVVKIIE------A-HQHDEATLLAKLAEFTTAMKAA----
9 PsiBlast_PDB 84.7634%-125 - C1 -2DZU - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVNGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
7 PsiBlast_PDB 84.6034%-125 - C1 -2DZS - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAAAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
10 PsiBlast_PDB 83.4634%-124 - C1 -2DZW - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
12 PsiBlast_PDB 83.3534%-129 - C1 -1WDW - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLY------EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
5 PsiBlast_PDB 82.7334%-126 - C1 -2DZX - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIARAAGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLYGT----EEIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
11 PsiBlast_PDB 82.3634%-130 - C1 -1GEQ - TRPA_PYRFU A:[3-243] -----------------KDGSLIPYLTAG----DPDKQSTLNFLLALDEYA-GAIELGIPFSDPIADGKTIQESHYRALKNGFKLR---EAFWIV-KE--FRRH---S--STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEFTEIAREEGIKTVFLAAPNTPDERLKVIDDMTTGFVYLVSLY-------EIP-K-TAYDLLRRAKRICRNKVAVGFGVSKREHVVSLLK-EG-ANGVVVGSALVKIIG--------EK------GREATEFLKKKVE-----
15 PsiBlast_PDB 80.4032%-157 - C1 -1UJP TRPA_THET2 A:[15-253] ------------------RAALIPYLTAGFPSREGFLQAVEEVLPYAD-----LLEIGLPYSD----GPVIQRASELALRKGMSVQ---GALELV-RE--VRAL---T--EKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVSV--------------EVKDLVRRIKARTALPVAVGFGVSG-KA-TAAQA-AV-ADGVVVGSALVRALE------E-GR------S-----------------
16 PsiBlast_PDB 78.3832%-152 - C1 -1WXJ TRPA_THET2 A:[15-241] ------------------RAALIPYLTAGFPSREGFLQAVEEVLPYAD-----LLEIGLPYS-----GPVIQRASELALRKGMSVQ---GALELV-RE--VRAL---T--EKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVS---------------EVKDLVRRIKARTALPVAVGFGVSG-KA-TAAQA-AV-ADGVVVGSALVRALE------E-GR------S-----------------