@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Wbm0556: (2015-12-02 )
MDENINFETDTTFALIKEAQRRKYKVFAYAPSNLALKLNQPIALAQKVSVDDCNFTSKEDVVINLNEMDIIFIRQDPPFDMRYITTTYILEKTRALVINNPTEMRNCPEKLITSLFPELIPPTLITENISMIRDFYHDYRGIILKPLYSYGGNDVIRIQNENSIQVVVELMITKYKCPVIAQAFCKNVNKDKRILLLDGQPIGVMKRVPRVSGEIRTNLRLGASFEPVEMNDRDNEICNKIGPELKKRGLIFVGIDIVDDFLLEINITSPTGVVYINKLYNTSLEKDLWNTFEEKASSHISQPSL

Atome Classification :

(20 SA) -------..--.......10........20........30......-.-.-40....-...-..-50--..-----..---.--....-60........70........---80--..--.-......90...---....-.-100........110......-----------..----120-..--.....130.-......140--........-150......-.-160...-....170---.-----.----------.....180.....-.-.-190......---.---.200-.-.--.-...-.210.......--.220..--.--...-----.-230.----.-----..-----.....240.......---250.........----260---.........270-.-.----.....280.......290.......300...
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------MD--ENINFETDTTFALIKEAQRRKYKVFAYAPSNLALK-L-N-Q-PIAL-AQK-VS-V---DD-----CN---F--TSKE-DVVINLNEMDIIFIRQDPPF---D---MR--Y-ITTTYILEKTR---ALVI-N-NP-TEMRNCPEK-LITSLFP-----------EL----IPP-TL--ITENISMIR-DFYHDYR-G--IILKPLYS-YGGNDVIRI-Q-NENSIQ-VVVELMI---T-----K----------YKCPVIAQAFCKN-V-N-K-DKRILLL---D---GQPI-G-V--M-KRV-PRV-SGEIRTN--LRLGAS--F--EPV-----E-M--N----D-----RD-----NEICNKIGPELKKRG---L--IFVGIDIVD----D-----FLLEINITSPTG-V-V----YINKLYNTSLEKDLWNTFEEKASSHISQPSL
1 PsiBlast_PDB 97.7335% -97 - C3 -1GSA GSHB_ECOLI A:[13-312] ------------NINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLI-N-G-E-ARAH-TRT-LN-V---KQNYEEWFS---F--VGEQ-D--LPLADLDVILMRKDPPF---D---TE--F-IYATYILERAEEKGTLIV-N-KP-QSLRDCNEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLDG-MGGASIFRVKE-GDPNLG-VIAETLT---E-----H----------GTRYCMAQNYLPA-IKD-G-DKRVLVV---D---GEPV-PYC--L-ARI-PQ--GGETRGN--LAAGGR--G--EPR-----P-L--T----E-----SD-----WKIARQIGPTLKEKG---L--IFVGLDIIG----D-----RLTEINVTSPTC-I-R----EIEAEFPVSITGMLMDAIEARLQ--------
8 HHSearch 94.9435% -96 - C3 -1GSA GSHB_ECOLI A:[18-314] -----------------KDSSFAMLLEAQRRGYELHYMEMGDLYLI-N-G-E-ARAH-TRT-LN-VKQNYE-----EW---F--SFVGEQ-DLPLADLDVILMRKDPPF---D---TEFIYATYILERAEEKG---TLIV-N-KP-QSLRDCNEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLDG-MGGASIFRV-K-EGDPNLGVIAETLT---E-----H----------GTRYCMAQNYLPAIK-D-G-DKRVLVV---D---GEPV-PYC--L-ARI-PQ--GGETRGN--LAAGGR--G--EPR-----P-L--T----E-----SD-----WKIARQIGPTLKEKG---L--IFVGLDIIG----D-----RLTEINVTSPTC-I-R----EIEAEFPVSITGMLMDAIEARLQ--------
4 PsiBlast_PDB 94.7134%-109 - C3 -1GLV - GSHB_ECOLI A:[13-312] ------------NINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLI-N-G-E-ARAH-TRT-LN-V---KQNYEEWFS---F--VGEQ-D--LPLADLDVILMRKDPPF---D---TE--F-IYATYILERAEEKGTLIV-N-KP-QSLRDCNEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLD-----ASIFRVKE-GDPNLG-VIAETLT---E-----H----------GTRYCMAQNYLPA-IKD-G-DKRVLVV---D---GEP-----------V-PYC----------LARGGG--G--EPR-----P-L--T----E-----SD-----WKIARQIGPTLKEKG---L--IFVGLDIIG----D-----RLTEINVTSPTC-I-R----EIEAEFPVSITGMLMDAIEARLQQQ------
2 PsiBlast_PDB 94.5335%-114 - C3 -1GSH - GSHB_ECOLI A:[13-312] ------------NINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLI-N-G-E-ARAH-TRT-LN-V---KQNYEEWFS---F--VGEQ-D--LPLADLDVILMRKDPPF---D---TE--F-IYATYILERAEEKGTLIV-N-KP-QSLRDCNEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLD-----ASIFRVKE-GDPNLG-VIAETLT---E-----H----------GTRYCMAQNYLPA-IKD-G-DKRVLVV---D---GEPV-PYC--L-A---------------------R--G--EPR-----P-L--T----E-----SD-----WKIARQIGPTLKEKG---L--IFVGLDIIG----D-----RLTEINVTSPTC-I-R----EIEAEFPVSITGMLMDAIEARLQQQ------
3 PsiBlast_PDB 94.2235%-116 - C3 -2GLT - GSHB_ECOLI A:[13-312] ------------NINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLI-N-G-E-ARAH-TRT-LN-V---KQNYEEWFS---F--VGEQ-D--LPLADLDVILMRKDPPF---D---TE--F-IYATYILERAEEKGTLIV-N-KP-QSLRDCNEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLD-----ASIFRVKE-GDPNLG-VIAETLT---E-----H----------GTRYCMAQNYLPA-IKD-G-DKRVLVV---D---GEPV-PYC--L-A---------------------R--G--EPR-----P-L--T----E-----SD-----WKIARQIGPTLKEKG---L--IFVGLDIIG----D-----RLTEINVTSPTC-I-R----EIEAEFPVSITGMLMDAIEARLQQQ------
28 Fugue 76.1337%-104 - C3 -1GSA ? ?:[123-314] --------------------------------------------------------------------------------------------------------------------------------------------------------NEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLDG-MGGASIFRV-KEGDPNLG-VIAETLT---E-----H----------GTRYCMAQNYLPA-I-K-DGDKRVLVV---D---GEPVPY-C--L-ARI-PQ--GGETRGN--LAAGGR--G--EPR-----P-L--T----E-----SD-----WKIARQIGPTLKEKG---L--IFVGLDIIG----D-----RLTEINVTSPTC-I-R----EIEAEFPVSITGMLMDAIEARLQ--------
10 HHSearch 67.8020% -88 - C3 -3VPB ARGX_SULTO A:[12-281] ------------------QEEKLIAKALEENKVQYDIINVAQEPLP-F-------------------------------------------NKALGRYDVAIIRPVSMY--------R--A-LYSSAVLEAAG---VHTI-N-SS-DVINVCGDK-ILTYSKLYREG-------IP----IPD-SI--IALSAEAAL-KAYEQRGFP--LIDKPPIG-SWGRLVSLI-R-DVFEGK-TIIEHRELMGN-----S----------ALKAHIVQEYIQY-K-G-R-DIRCIAI---G---EELL-G-C--Y-ARN-IP--PNEWRAN--VALGGT--P--SNI-----E-V--D----E-----KL-----KETVVKAVSIV---H---G--EFVSIDILE----HPNKGYVVNELNDV-P-E-F-K----GFMVATNINVAQKLVEYIKENYS--------
9 HHSearch 64.0615% -89 - C3 -3VPD LYSX_THET8 A:[10-280] -----------------RPDERMLFERAEALGLPYKKVYVPALPMV-L-G-E-------------------------R-------------PEALEGVTVALERCVSQS--------R--G-LAAARYLTALG---IPVV-N-RP-EVIEACGDK-WATSVALAKAG-------LP----QPK-TA--LATDREEAL-RLMEAFGYP--VVLKPVIG-SWGRLLAKV-T-DRAAAE-ALLEHKE---VLGG--F----------QHQLFYIQEYVEK-P-G-R-DIRVFVV---G---ERAI-A-A--I-YRR-S----AHWITN--TARGGQ--A--ENC-----P-L--T----E-----EI-----ARLSVGAAEAV---G---G--GVVAVDLFE----SERGL-LVNEVNHTM-E--F-K----NSVHTTGVDIPGEILRYAWEVARG-------
31 Fugue 63.4314% -77 - C3 -4IWX RIMK_ECOLI A:[19-312] SHMKIAILS--RDGTLYSCKRLREAAIQRGHLVEILDPLSCYMNIN-P-A-A-S----------------S-----IH---Y--KGRK------LPHFDAVIPRIGTAI---T---FY--G-TAALRQFEMLG---SYPL-N-ES-VAIARARDK-LRSMQLL-----------ARQGIDLPV-TG--IAHSPDDTS-DLIDMVG-GAPLVVKLVEG-TQGIGVVLA-E-TRQAAE-SVIDAFR---G----------------LNAHILVQEYIKE-A-QGC-DIRCLVV---G---DEVV-A-A--I-ERR-AK--EGDFRSN--LHRGGA--A--SVA-----S-I--T----P-----QE-----REIAIKAARTM---A---L--DVAGVDILRANRGP-----LVMEVN--ASPG-L-E----GIEKTTGIDIAGKMIRWIERHATT-------
29 Fugue 51.9836%-108 - C3 -1GSA ? ?:[1-122] MIKLGIVMDPIANINIKKDSSFAMLLEAQRRGYELHYMEMGDLYLI-N-G-E-ARAH-TRT-LN-V---KQ-----NYEEWF--SFVG-EQDLPLADLDVILMRKDPPF---D---TE--F-IYATYILERAEEKGTLIV-N-KP-QSLRDCNEK-LFTAWFS-----------DL----TPE-TL--VTRNKAQLK-AFWEKHS-D--IILKPLDG-MGGASIFRV-K-EGDPNL-GVIAETL---T-----E----------HGTRYCMAQNYLP-A-I-K-DGDKRVL---V---VDGE-P-V--P-YCL-ARI-PQGGETR--GNLAAG--G--RGE-----P-R--P----L-----TE-----SDWKIARQIGPTLKE---K--GLIFVGLDI----I-----GDRLTEINVTSP-T-C----IREIEAEFPVSITGMLMDAIEARLQ------
15 HHSearch 51.4216% -79 - C3 -1PK8 SYN1_RAT A:[177-418] ---------------------------------------------------------------------------------------------RSLKPDFVLIRQHAFS---MARNGD--Y-RSLVIGLQYAG---IPSV-N-SL-HSVYNFCDK-PWVFAQMVRLHKKLGTEEFP----LID-QT--FYPNH---K-EMLSSTTYP--VVVKMGHA-HSGMGKVKV-D-NQHDFQ-DIASVVA---L----------------TKTYATAEPFIDA-K---Y-DVRVQKI---G---QNYK-A-Y--M--RT-SV--SGNWKTN--TGS-AM--L--EQI-----A-M--S----D-----RY-----KLWVDTCSEIF---GG--L--DICAVEALH----GKDGRDHIIEVVGSSMPL-I-G----DHQDEDKQLIVELVVNKMTQA----------
21 HHSearch 50.4513% -94 - C3 -3R5X DDL_BACAN A:[24-298] --------------------GNEMIANLDKNKYEIVPITLNEKMD--------------------------------L-------------IEKAKDIDFALLALHGKY---G---E---D-GTVQGTLESLG---IPYS-G-SNMLSSGICMDK-NISKKILRYEG-------IE----TPD-WI--ELTKMEDLNFDELDKLGFP--LVVKPNS-----VGVKIV-Y-DKDELI-SMLETVF---E----------------WDSEVVIEKYIKG-E-----EITCSIF---D---GKQL-P-I--ISIRH-A---AEFFDYNAKYDDAST--IE-EVI-----E-L--PAELKE-----RV-----NKASLACYKAL---KC--S--VYARVDMMV----KDGIP-YVMEVNTLPGMT-Q-ASLLPKSADAAGIHYSKLL-DMIIETSLRVRKEEG-
11 HHSearch 50.0615% -78 - C3 -2P0A SYN3_HUMAN A:[33-324] ----------------------KYFHGKKVNGEIEIRVEQAEFSELNL-A-A-YVTG-GCM-VD-M----Q----------------------RSFKPDFILVRQHAYSMALG---ED--Y-RSLVIGLQYGG---LPAV-N-SL-YSVYNFCSKPWVFSQLIKIFHSLGPEK-FP----LVE-QT--FFPNHKP----MVTAPHFP--VVVKLGHA-HAGMGKIKV-E-NQLDFQ-DITSVVA---M----------------AKTYATTEAFIDS---K-Y-DIRIQKI---G---SNYK-A-Y--M--RT-SI--SGNWKAN--TGS-AM--L--EQV-----A-M--T----E-----RY-----RLWVDSCSEMF---GG--L--DICAVKAVH----SKDGRDYIIEVMDSSMPL-I-G----EHVEEDRQLMADLVVSKMSQLP---------
27 HHSearch 49.0414% -80 * C3 *3ORQ ? A:[22-303] ------------------QLGKMMAQSAQKMGYKVVVLDPSEDCPC-R-Y---VAHE-FIQ-AK-YD--DE-----KA---L--N------Q-LGQKCDVITYEFENIS-----------A-QQLKLLCEKYN---IP---Q-GY-QAIQLLQDR-LTEKETLKSAG-------TK----VVP-FI--SVKESTDID-KAIETLGYP--FIVKTRFGGYDGKGQVLI-N-NEKDLQ-EGFKLI---------------------ETSECVAEKYLNIKK-----EVSLTVT---RGNNNQIT-F-FP-L-QEN-E------HRNQ--IL-FKT--I--VPA-----R-IDKT----A-----EA-----KEQVNKIIQSI---HF--I--GTFTVEFFI----DSNNQLYVNEIAPRPHNS-G-H----YSIEACDYSQFDTHILAVTGQSLPNSIELLK
19 HHSearch 48.7013% -77 - C3 -3VOT ? A:[15-321] ------------------KHLPFIFEEAERLGLKVTFFYNSAEDFP-G-NLP-AVER-CVP-LPLFED-EE-----AA---M--DVVR-Q-TFVEFPFDGVMTLFEPAL-------------PFTAKAAEALN---LPG--L-PF-TTMENCRNK-NKTRSILQQNG-------LN----TPV-FH--EFHTLADLE-N--RKLSYP--LVVKPVN------GVVRV-D-DRKELE-EAVRKVE---A-----VNQRDLNRFVHGKTGIVAEQFIDG-P-E-F-AIETLSI---Q---GNVH-V-LS-I-GYKGNS--KGPF-----FEEGVY--I--APA-----Q-L--KEETRL-----AI-----VKEVTGAVSAL---G---IHQGPAHTELRL----DKDGTPYVIEVGARIGGS-G-VSHY-IVKESTGINFMQLVLQNALKPLESSEFEGEI
22 HHSearch 47.9512% -74 - C3 -1ULZ - ? A:[11-320] -----------------GEIAVRIIRACKELGIPTVAIYNEVESTA-RHV-K-LADE-AYM-IG-TDP-LD-----TY---LNKQRII-N-LALEVGADAIHPGYGFLA---E-------N-AEFAKMCEEAG---ITFI-GPHW-KVIELMGDK-ARSKEVMKKAG-------VP----VVP-GSDGVLKSLEEAK-ALAREIGYP--VLLKATAG-GGGRGIRIC-R-NEEELV-KNYEQAS---REAEKAF----------GRGDLLLEKFIEN-P---K-HIEYQVLGDKH---GNVI-H-L--G-ERD-CS--IQRRNQK--LVEIAP--SLILTP-----E-K--R----E-----YY-----GNIVTKAAKEI---GY--Y--NAGTMEFIA----DQEGNLYFIEMNTRIQVE-H-P----VSEMVTGIDIVKWQIKIAAGEPLTIKQEDVK
18 HHSearch 46.2411% -74 - C3 -2YRX ? A:[34-338] --------------------HAIAWKAAQSPLVGKLYVAPGNPGIA-DVA-ELVHID-ELD--------IE-----AL---V--Q------FAKQQAIDLTIVGPEAPL-----------A-SGIVDRFMAEG---LRIFGP-SQ-RAALIEGSK-AFAKELMKKYG-------IP----TAD-HA--AFTSYEEAK-AYIEQKGAP--IVIKAD-----GKGVTVA-Q-TVEEAL-AAAKAAL---VDGQFGT----------AGSQVVIEEYLEG-E-E-F-SFMAFVN---G---EKVY-P-LA-I-AQDHKRAYDGDEGPN--TGGMGA--Y--SPV-----PQI--S----DEMMDAAL-----EAILRPAAKALAAEGRPFL--GVLYAGLMA----TANGP-KVIEFNARFGDP-EAQ----VVLPRLKTDLVEAVLAVMDGKELELEWTDEA
26 HHSearch 46.0413% -64 - C3 -1A9X - CARB_ECOLI A:[580-873] ------------------YCCVHASLALREDGYETIMVNCNPETVS-T-D-YDTSDR-LYF-E------PV-----TL---E--DVLE---IVRIEKPKGVIVQYGGQT---P---------LKLARALEAAG---VPVIGT-SP-DAIDRAEDR-ERFQHAVERLK-------LK----QPA-NA--TVTAIEMAV-EKAKEIGYP--LVVRA--------AMEIV-Y-DEADLR-RYFQTAV-------------------------LLDHFLDDAV-E-V-DVDAICD---G---EMVL-I-GGIM-EHI-EQ---A----G--VHSGDSACS--LPAYTLSQE-I--Q----D-----VM-----RQQVQKLAFEL---QV--R--GLMNVQFAV----KNNEV-YLIEVNPRAART-V-P----FVSKATGVPLAKVAARVMAGKSLAEQGVTKE
12 HHSearch 45.7412% -75 - C3 -2IP4 ? A:[17-312] ------------------------WKAAQSPRVKRLYAAPGNAGME-A-----LAEL-VPWNGD-----VE-----AL---A--D------WALAEGIDLTLVGPEAPL-----------V-EGIADAFQARG---LLLFGP-TQ-KAAMIEGSK-AFAKGLMERYG-------IP----TAR-YR--VFREPLEAL-AYLEEVGVP--VVVKDSGL-AAGKGVTVA-F-DLHQAK-QAVANIL---NR----A----------EGGEVVVEEYLEG-E-E-A-TVLALTD---G---ETIL-P-LL-P-SQDHKRLLDGDQGPM--TGGMGA--V--APY-----P-M--D----E-----ATLRRVEEEILGPLVRGLRAEGVVYR--GVVYAGLML----TREGP-KVLEFNARFGDP-E-AQ---ALLPLLENDLVELALRVAEGRLAGTRLSWKE
14 HHSearch 45.3713% -71 - C3 -1I7N - SYN2_RAT A:[131-420] ------------------------FRGKKILGDYDIKVEQAEFSEL-N-L-V-AHADGTYA-VD-M---Q------V----L--RNGT-K-VVRSFRPDFVLIRQHAFG---MAENED--F-RHLVIGMQYAG---LPSI-N-SL-ESIYNFCDK-PWVFAQMVAIFKTLGGEKFP----LIEQTY--YPNHR-----EMLTLPTFP--VVVKIGHA-HSGMGKVKV-E-NHYDFQ-DIASVVA---L----------------TQTYATAEPFIDA---K-Y-DIRVQKI---G---NNYK-A-Y--M-RTS-I---SGNWKTN--TGS-AM--L--EQI-----A-M--S----D-----RY-----KLWVDACSEMF---GG--L--DICAVKAVH----GKDGKDYIFEVMDC-SMPLI-G----EHQVEDRQLITDLVISKMNQLLS--------