Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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3D Common Core:

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Complexes Modeling

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Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : SA0332: (2016-03-14 )
MWSFKSMFNTPEDPEKDAYEFYGKVQPGITTPTQKTCNFVALDLKSKDRDAIKAMFKKWTVMADRMMDGDTVGKTSNNPLMPPVDTGESIGLGASKLTITFGISKSLMKKIGLSSKIPDAFKDLPHFPNDQLIDDYSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGFISAKGKETPRNLMAFKDGTINPRKSNQLKDYVFIDDGWAKHGTYCVVRRIQIHIETWDRTALEEQEATFGRKRHSGAPLTGGKEFDEIDLKAKDSHGEYIIDKDAHTRLAKEANTSILRRAFNYVDGTDDRTGNFETGLLFIAFQKATKQFIDIQNNLGSNDKLNEYITHRGSASFLVLPGVSKGGYLGETLFD

Atome Classification :

	(20 SA)									.........10........20........30-........40....--.-.--..50........60.........70.......--.80........90.-........100......-.110........120.....--------...--130...--....140.......150.......160.......170.....----..-----180.-----.----.....190....--...200--..-----------...-..210----.--------.---.--.....220.......230.....------------..240.-------......250.......260-........------------.270.......280.....---.----.290------.---...-.....300.......-----310.......320-.-..-..-..330...------.-------------.------.-----------------------.340.......350.......360.-.-......370
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		MWSFKSMFNTPEDPEKDAYEFYGKVQPGITT-PTQKTCNFVALDLK--S-K--DRDAIKAMFKKWT-VMADRMMDGDTVGKTSNN--PLMPPVDTGESI-G-LGASKLTITFGISKSLM-KK-IGLSSKIPDAF-KDLPH--------FPN--DQLIDD--YSDGDIMIQACSNDSQVSFHAVHNLVRPFRDIVKVRWAQSGF----IS-----AKGK-----E----TPRNLMAFKDGT--INPRKS--NQ-----------LKD-YVFI-----D--------D---G--WAKHGTYCVVRRIQIHIETWDRT------------ALEEQE-------ATFGRKRHSGAPLTGGK---EFDEIDLK------------AKDSHGEYIIDKDAHTRLA---K----EA--------N---TSI-LRRAFNYVDGTDDRT-----GNFETGLLFIAFQ-K-AT-KQ-FIDIQNNL------G-------------S------N-----------------------DKLNEYITHRGSASFLVLPGVS-KG-G-YLGETLFD
1	PsiBlast_PDB	93.73	43%	-77	- C6 -	4GRC		?	A:[77-436]	-----------------AVPFHGAHQAGIAT-PVQDRLHFAAFDVT--T-E--DRAAFVALLKEWT-AAARRLTAGHAVGEGAYGGLPEAPPDDTGEAL-G-LKPSRLTLTIGFGPSLF-TR-FGLADLRPEAL-ADLPK--------FPG--DNLDRA--RSGGDLCVQACADDPQVAVHAIRNLARIGFGKVVVRWSQLGFGKTSST-----TPDE-----Q----TPRNLLGFKDGTRNIAGTEK--DR-----------LDR-FVWAAE---K--------D---GTPWMTGGSYLVARRIRMHIETWDRA------------SLQEQE-------DVFGRDKGEGAPVGKAK---ERDEPFLK------------A--------MKPDAHVRLAHPDS----NG--------G---ATL-LRRGYSFTDGTD-----------DAGLFFLAYQ-R-DI-RTGFVPVQRNL--------------------A------T-----------------------DALNEYIQHVGSAVFAVPPGVR-DADD-WWGSTLF-
3	PsiBlast_PDB	91.35	35%	-69	- C6 -	2Y4D		EFEB_ECOLI	A:[28-401]	------------DARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGK-VIALDSHIRLA---NP----S--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYFGSALL-
24	PsiBlast_CBE	90.97	34%	-66	- C6 -	4GT2		?	G:[102-464]	--------------------FHGKHQPGITT-PMQARGHLVAFDLA--AGA--GRKEAAALLRRWS-DTARRLMAGEPAGSR-----------DTDVAR-D-AGPSSLTVTFGFGHSFF-GR-TGLEEQRPVAL-DPLPD--------FSS--DHLDKN--RSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGF----NR-----SPGA-----TAHPMTARNLMGQVDGT--RNPKPG--EA-----------DFDRRIFV-----P--------EP--A--WMANGSYVVVRRIRMLLDDWEEL------------SLKAQE-------DVIGRRKSDGAPLSGGSGATESTEMDLE------------KTDGSGELVVPINAHARIT---RPDQ-NG--------G---AAM-VRRPFSYHDGFDA-D-----GVPDAGLLFVCWQ-ADPL-RG-FVPVQRKL------D-------------R------G-----------------------DALSQFIRHEASGLFAVPGGAA-EG-E-YVGQRLLE
6	PsiBlast_PDB	90.87	36%	-72	- C6 -	3O72		EFEB_ECO57	A:[21-386]	--------------------FYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGKGIA-LDSHIRLA---NPRTAES--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYLGSALL-
23	PsiBlast_CBE	90.59	35%	-69	- C6 -	2Y4D		EFEB_ECOLI	B:[28-401]	------------DARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGK-VIALDSHIRLA---NP----S--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYFGSALL-
26	PsiBlast_CBE	90.49	34%	-67	- C6 -	4GT2		?	A:[102-464]	--------------------FHGKHQPGITT-PMQARGHLVAFDLA--AGA--GRKEAAALLRRWS-DTARRLMAGEPAGSR-----------DTDVAR-D-AGPSSLTVTFGFGHSFF-GR-TGLEEQRPVAL-DPLPD--------FSS--DHLDKN--RSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGF----NR-----SPGA-----TAHPMTARNLMGQVDGT--RNPKPG--EA-----------DFDRRIFV-----P--------EEGPA--WMANGSYVVVRRIRMLLDDWEEL------------SLKAQE-------DVIGRRKSDGAPLSGGSGATESTEMDLE------------KTDGSGELVVPINAHARIT---RPDQ-NG--------G---AAM-VRRPFSYHDGFDA-D-----GVPDAGLLFVCWQ-ADPL-RG-FVPVQRKL------D-------------R------G-----------------------DALSQFIRHEASGLFAVPGGAA-EG-E-YVGQRLLE
2	PsiBlast_PDB	90.44	35%	-70	- C6 -	2Y4F		EFEB_ECOLI	A:[17-390]	------------DARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGK-VIALDSHIRLA---NPRTAES--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYFGSALL-
21	PsiBlast_CBE	90.10	35%	-68	- C6 -	2Y4F		EFEB_ECOLI	B:[17-390]	------------DARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGK-VIALDSHIRLA---NPRTAES--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYFGSALL-
22	PsiBlast_CBE	89.84	35%	-70	- C6 -	2Y4E		EFEB_ECOLI	B:[28-401]	------------DARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGK-VIALDSHIRLA---NPRTAES--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYFGSALL-
5	PsiBlast_PDB	89.81	34%	-65	- C6 -	4GT2		?	B:[102-464]	--------------------FHGKHQPGITT-PMQARGHLVAFDLA--AGA--GRKEAAALLRRWS-DTARRLMAGEPAGSR-----------DTDVAR-D-AGPSSLTVTFGFGHSFF-GR-TGLEEQRPVAL-DPLPD--------FSS--DHLDKN--RSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGF----NR-----SPGA-----TAHPMTARNLMGQVDGT--RNPKPG--EA-----------DFDRRIFV-----P--------EP--A--WMANGSYVVVRRIRMLLDDWEEL------------SLKAQE-------DVIGRRKSDGAPLSGGSGATESTEMDLE------------KTDGSGELVVPINAHARIT---RPDQ-NG--------G---AAM-VRRPFSYHDGFDA-D-----GVPDAGLLFVCWQ-ADPL-RG-FVPVQRKL------D-------------R------G-----------------------DALSQFIRHEASGLFAVPGGAA-EG-E-YVGQRLLE
4	PsiBlast_PDB	88.93	35%	-66	- C6 -	2Y4E		EFEB_ECOLI	A:[28-401]	------------DARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPN---PRLPPLDSGILG-GYIAPDNLTITLSVGHSLFDER-FGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----ISDHAARSKGK-----E----TPINLLGFKDGT--ANPDSQ--NDKL---------MQK-VVWVTADQQE--------P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDY-------------ASDPEGK-VIALDSHIRLA---NPRTAES--------E---SSLMLRRGYSYSLGVTN-S-----GQLDMGLLFVCYQ-HDLE-KG-FLTVQKRL--------------------N------G-----------------------EALEEYVKPIGGGYFFALPGVK-DA-NDYFGSALL-
25	PsiBlast_CBE	88.87	34%	-65	- C6 -	4GT2		?	E:[102-464]	--------------------FHGKHQPGITT-PMQARGHLVAFDLA--AGA--GRKEAAALLRRWS-DTARRLMAGEPAGSR-----------DTDVAR-D-AGPSSLTVTFGFGHSFF-GR-TGLEEQRPVAL-DPLPD--------FSS--DHLDKN--RSNGDLWVQIGADDALVAFHALRAIQRDAGAAARVRWQMNGF----NR-----SPGA-----TAHPMTARNLMGQVDGT--RNPKPG--EA-----------DFDRRIFV-----P--------EEP-A--WMANGSYVVVRRIRMLLDDWEEL------------SLKAQE-------DVIGRRKSDGAPLSGGSGATESTEMDLE------------KTDGSGELVVPINAHARIT---RPDQ-NG--------G---AAM-VRRPFSYHDGFDA-D-----GVPDAGLLFVCWQ-ADPL-RG-FVPVQRKL------D-------------R------G-----------------------DALSQFIRHEASGLFAVPGGAA-EG-E-YVGQRLLE
28	HHSearch	88.19	35%	-65	- C6 -	3O72		EFEB_ECO57	A:[13-387]	------------VARNEKQPFYGEHQAGILT-PQQAAMMLVAFDVL--A-S--DKADLERLFRLLT-QRFAFLTQGGAAPETPNP---RLPPLDSGILGGY-IAPDNLTITLSVGHSLF-DERFGLAPQMPKKL-QKMTR--------FPN--DSLDAA--LCHGDVLLQICANTQDTVIHALRDIIKHTPDLLSVRWKREGF----IS-----DHAARSKGKE----TPINLLGFKDGT--ANPDSQNDKL-----------MQK-VVWV-----TADQQE---P---A--WTIGGSYQAVRLIQFRVEFWDRT------------PLKEQQ-------TIFGRDKQTGAPLGMQH---EHDVPDYA------------S-DPEGK-GIALDSHIRLA---N----PRTAESE---S---SLM-LRRGYSYSLGVTNS------GQLDMGLLFVCYQ-H-DLEKG-FLTVQKRL------N--------------------G-----------------------EALEEYVKPIGGGYFFALPGVKDAN-D-YLGSALLR
27	PsiBlast_CBE	73.38	37%	-61	- C6 -	4GS1		?	B:[97-394]	-------------------------------------------------------------------------------------------------SA-G-LLPASLMVTIGIGGSLL-EA-MDAADRRPDAL-ADLPE--------FAT--DDLRPR--WCGGDLMLQVGAEDPMVLAAAVDELVAATAPTTTVRWSLRGFRR--TA-----AAAQ-----DPDA-TPRNLMGQIDGT--ANPAQD--HP-----------LFT-RTVTAPPA-D--------DPAHA--WMDGGSYLVVRRIRMLLDEWRRL------------DVPDRE-------RVIGRHLDTGAPLGGEK---ETDPVVLT------------ARDADGRLVIPEDAHVRLA---N----PE--------NNLGARM-VRRGYNYDEGWRD-D-----GVRDAGLLFMAWQGN-PA-TG-FVPVQRSLV-----E-------------Q------G-----------------------DALNRYTRHEGSALFAV-PAAT-AD-R-YPGQDLVE
7	PsiBlast_PDB	72.95	37%	-59	- C6 -	4GS1		?	A:[97-394]	-------------------------------------------------------------------------------------------------SA-G-LLPASLMVTIGIGGSLL-EA-MDAADRRPDAL-ADLPE--------FAT--DDLRPR--WCGGDLMLQVGAEDPMVLAAAVDELVAATAPTTTVRWSLRGFRR--TA-----AAAQ-----DPDA-TPRNLMGQIDGT--ANPAQD--HP-----------LFT-RTVTAPPA-D--------DPAHA--WMDGGSYLVVRRIRMLLDEWRRL------------DVPDRE-------RVIGRHLDTGAPLGGEK---ETDPVVLT------------ARDADGRLVIPEDAHVRLA---N----PE--------NNLGARM-VRRGYNYDEGWRD-D-----GVRDAGLLFMAWQGN-PA-TG-FVPVQRSLV-----E-------------Q------G-----------------------DALNRYTRHEGSALFAV-PAAT-AD-R-YPGQDLVE
30	HHSearch	64.49	19%	-63	* C6 *	3QNS		?	A:[10-316]	---------------------RLAPQAV-LT-PPSAASLFLVLVAG--D-SDDDRATVCDVISGID-GPLKAVGFREL--------------------------AGSLSCVVGVGAQFW-DR-VS-ASSKPAHL-HPFVP--------LSG--PVHSAP--STPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGF----RY-----FD-------------SRDLLGFVDGT--ENPTDD--D------------AAD-SALI-----GDE------D---P--DFRGGSYVIVQKYLHDMSAWNTL------------STEEQE-------RVIGRTKLENVELDD--------------------------D------AQPSNSHVTLN---T----IVDDDGV---E---HDI-LRDNMAFGSLGE----------AEYGTYFIGYA-K-DP-AV-TELMLRRM------F-------------LGEPPGNY-----------------------DRVLDFSTAATGTLFFVPSRDV-LE-S-L-------
29	HHSearch	63.69	17%	-65	- C6 -	2IIZ		?	A:[8-308]	----------------------PREQLGVCA-EGNLHSVYLMFNAN--D-N--VESQLRPCIANVA-QYIYELTDQYS--------------------------DSAFNGFVAIGANYW-DS-L-YPESRPEML-KPFPA--------MQE--GNREAP--AIEYDLFVHLRCDRYDILHLVANEISQMFEDLVELVEEERGF----RF-----MD-------------SRDLTGFVDGT--ENPKGR--H------------RQE-VALV-----GSE------D---P--EFKGGSYIHVQKYAHNLSKWHRL------------PLKKQE-------DIIGRTKQDNIEYES--------------------------E------DKPLTSHIKRV---N----LKDENGK---S---IEI-LRQSMPYGSLK------------EQGLMFISTC-R-TP-DH-FEKMLHSM------V-------------FGDGAGNH-----------------------DHLMHFTSALTGSSFFAPSLDF-LM-----------
31	HHSearch	63.45	17%	-63	- C6 -	2GVK		?	A:[13-313]	-----------------------IPQDV-AG-KQGENVIFIVYNLT--D-SPDTVDKVKDVCANFS-AMIRSMRNRFP--------------------------DMQFSCTMGFGADAW-TR-LFPDKGKPKEL-STFSE--------IKG--EKYTAV--STPGDLLFHIRAKQMGLCFEFASILDEKLKGAVVSVDETHGF----RY-----MD-------------GKAIIGFVDGT--ENPAVD--EN-----------PYH-FAVI-----GEE------D---A--DFAGGSYVFVQKYIHDMVAWNAL------------PVEQQE-------KVIGRHKFNDVELSDE--------------------------------EKPGNAHNAVT---N----IGD-------D---LKI-VRANMPFANTSK----------GEYGTYFIGYA-S-TF-ST-TRRMLENM------F-------------IGSPAGNT-----------------------DRLLDFSTAITGTLFFVPSYDL-LG-----------
42	Fugue	62.75	18%	-60	- C6 -	3QNS		?	A:[8-318]	VARLAPQ--------------------AVLT-PPSAASLFLVLVAGDSD-D--DRATVCDVISGID-GPLKAVGFRELAGS--------------------------LSCVVGVGAQFW-DR-V-SASSKPAHL-HPFVP--------LSG--PVHSAP--STPGDLLFHIKAARKDLCFELGRQIVSALGSAATVVDEVHGF----RY-----FDS-------------RDLLGFVDGT--ENPTDD--DA-----------ADSALIGD-----E--------D---P--DFRGGSYVIVQKYLHDMSAWNTL------------STEEQE-------RVIGRTKLENVELDDDA----------Q------------PSNSHVTLNTIVDDDGV--------------------E---HDI-LRDNMAF-----GSL-----GEAEYGTYFIGYA-K-DP-AV-TELMLRRMFLGEPPG-------------N------Y-----------------------DRVLDF-STAATGTLFFVPSRD-VL-E-SLGD----
32	HHSearch	57.55	17%	-47	- C6 -	3VXJ		?	A:[5-439]	------------------ILPLNNIQGDILVGMKKQKERFVFFQVN--D-A----TSFKTALKTYVPERITSAAILIS--------------------D-P-SQQPLAFVNLGFSNTGL-QA-LGI---TDDLGDAQFPDGQFADAANLGDDLSQWVAPFTGTTIHGVFLIGSDQDDFLDQFTDDISSTFGSSITQVQALSGS----AR-----PGD------Q----AGHEHFGFLDGI--SQPSVT--GWETTVFPGQAVVPPG-IILT-----GRDGDTGTRP---S--WALDGSFMAFRHFQQKVPEFNAYTLANAIPANSAGNLTQQEGAEFLGARMFGRWK-SGAPIDLAP---TADDPALGADPQRNNNFDYSDTLTDET-RCPFGAHVRKT---N----PRQDLGGPVDT---FHA-MRSSIPYGPETSDAELASGVTAQDRGLLFVEYQ-S-IIGNG-FRFQQINW------ANNANFPFSKPITPG------IEPIIGQTTPRTVGGLDPLNQNETFTVPLFVIPKGGEYFFLPSISA-LT-A-T-------