@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Rv0079: (2016-04-19 )
MEPKRSRLVVCAPEPSHAREFPDVAVFSGGRANASQAERLARAVGRVLADRGVTGGARVRLTMANCADGPTLVQINLQVGDTPLRAQAATAGIDDLRPALIRLDRQIVRASAQWCPRPWPDRPRRRLTTPAEALVTRRKPVVLRRATPLQAIAAMDAMDYDVHLFTDAETGEDAVVYRAGPSGLRLARQHHVFPPGWSRCRAPAGPPVPLIVNSRPTPVLTEAAAVDRAREHGLPFLFFTDQATGRGQLLYSRYDGNLGLITPTGDGVADGLA
Atome Classification :
(20 SA)
------------------------------......-...10--------------..-.......--20......-.-.-30...------..-------...40----------------.........50-----....------------------------------....----60....--.....70..---......-80........90...-.....--100..---.------....110-----..-----------------.-....--------..120--..-------..-.....130.....-------...------------.140.-----.....-.150.......160----..----------...---------------.--..-----170---------..----.....180.----.-....---------------.190---..----..---------------..---...200-...--------....210.-------------.....-..----220....---------...230......-----------.240-----.-.....--.250------------------...-....-------..260.....--------..270.--------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------------------MEPKR
S
-
R
L
V
V
---------------CA-PE
P
S
H
A
R--EFP
D
V
A
V
F-S-G-GRA
N
A
------
S
Q
-------
A
E
R
L
-----------------
A
R
A
V
G
R
V
L
A
DR-----GVTG------------------------------G
A
R
V
----
R
-
L
T
M
A--NCADG
P
T
L
V
---
Q
I
N
L
Q
V-GDTPL
R
A
Q
AATA
G
I
D
-
D
L
R
P
A
--
L
I
R
L
D
---
R
------
Q
I
V
R
A
-------SA-----------------Q-WCPR--------PWP----DR-------PR-RRLT
T
P
--
A
E
A
L
V
-------TRR------------K
P
V
V
L
-----RRAT
P
-
L
Q
A
I
A
A
MDAM
D
Y
D
-----
V
H
----------
L
F
T---------------D--AE-----TGE---------
D
A
----
V
V
Y
RAGPSG----
L
-
R
L
A
R
---------------QH-----HV----FP---------------PG---WSRCRA-PAG--------PP
V
P
L
-
I
V-------------NSRPT-PV----
L
T
E
A
A
A
V
---------
D
R
A
R
EHGL
P
F
L
F
-----------
F
TDQ-----A-TGR
G
Q
--
L
L
--------------------
Y
S
R-YDGN-------
L
G
L
I
TPTGDG--------VADGLA--------------------------
25
Fugue
82.25
27%
-61
- C2 -
4YLA
5
?
A:
[2-375]
--------------------AGDPF
V
D
N
G
T
V
S
S
Q
R
P
-
L
R
A
V
---------------
P
G
-
R
Y
P
P
G
A
---
T
H
L
D
A
A
V
D
-
T
-
L
-
V
R
C
H
A
A
L
GRA
P
S
E
-------
A
E
A
A
-----------------
V
C
L
L
R
R
L
W
G
R
W
-----
G
N
T
P
VERPGWRSYVAVD-----------------
G
S
P
F
----
E
-
L
S
A
A
--
W
N
G
D
G
P
A
E
V
---
R
V
T
V
E
A
T
A
D
P
P
T
P
E
G
N
Q
E
A
G
W
E
-
Y
L
R
G
L
--
S
R
H
P
G
AAT
A
------
R
V
L
A
L
-------
E
D
-----------------
L
-
F
R
P
Q
--------
T
P
H
----
D
R
C
W
I
M
H
G
M
A
S
-
R
P
G
A
D
P
--
L
F
K
V
Y
L
D
PDARG
A
A
E
------------
A
P
S
V
L
-----
D
E
A
M
D
R
L
G
V
R
A
A
W
Q
G
L
R
G
W
-----
L
D
E
H
GGSGRIG
S
L
A
L
---------------
D
--
L
A
-----
D
T
D
---------
D
A
R
V
K
V
Y
V
Q
H
A
G
L
D
W
----
A
-
D
I
D
R
---------------
Q
A
-----
A
V
ARGH
V
P
---------------
G
A
---
F
S
A
A
L
E
-
E
I
T
GTEVPPH
K
P
P
V
T
C
-
F
A
-------------
F
H
R
G
V
-
G
V
----
P
T
A
A
T
L
Y
I
P
M
P
AGVP
E
S
D
A
R
R
R
S
A
A
F
M
R
R
S
GLD
S
A
A
Y
L
A
F
L
A
A
-----
A
-
T
G
D
G
E
------------------------
G
V
R
-
A
L
Q
N
-------
F
V
A
Y
R
P
A
A
P
G
G
R
P
R
F
A
C
Y
V
A
P
G
L
Y
RL------------------------
26
Fugue
69.72
16%
-57
* C4 *
2BNE
5
PYRH_ECOLI
A:
[5-241]
------------------------------
A
K
P
V
Y
K
-
R
I
L
L
---------------
K
L
-
S
G
E
A
L
Q
G
--
T
--------
E
-
G
-
F
G
I
D
A
------
S
I
-------
L
D
R
M
-----------------
A
Q
E
I
K
E
L
V
E
L
----------------------------------------
G
I
Q
V
----
G
-
V
V
I
G
GG
N
L
F
R
G
A
G
L
A
---
K
A
G
M
N
R
-
V
V
G
D
H
M
G
M
L
A
T
V
M
N
G
-
L
A
M
R
D
--
A
L
H
R
A
---
Y
------
V
N
A
R
L
-------
M
S
---------------------
A
I
--------
P
L
N
----
G
V
-------
C
D
-
S
Y
S
W
A
E
--
A
I
S
L
L
-------
R
N
N
------------
R
V
V
I
L
S
AGTG
N
P
F
F
T
-
T
D
S
A
A
C
L
R
G
I
E
I
E
-----
A
N
----------
V
V
L
---------------
K
--
A
T
-----
K
V
D
---------
G
------
V
F
T
A
D
P
P
-----------------------------------------------------------------
T
A
-
T
M
Y
--------
E
Q
L
T
Y
-
S
E
-------------
V
L
E
K
E
-
L
K
----
V
M
D
L
A
A
F
---------
T
L
A
R
D
H
K
L
P
I
R
V
-----------
F
N
-------
M
-
N
K
P
G
A
--
L
R
--------------------
R
V
V
-
M
G
E
K
-------
E
G
T
L
I
T
E
-------------------------------------------
24
Fugue
60.65
14%
-63
- C4 -
2A1F
-
PYRH_HAEIN
A:
[1-239]
-----------------------------L
S
Q
P
I
Y
K
-
R
I
L
L
---------------
K
L
-------------
S
G
E
A
L
-
Q
-
G
-
E
D
G
L
G
------
I
D
-------
P
A
I
L
-----------------
D
R
M
A
V
E
I
K
E
L
V
-----
E
M
G
V
------------------------------
E
V
S
V
----
V
-
L
G
G
G
--
N
L
F
R
G
A
K
L
A
---
K
A
G
M
N
R
-
V
V
G
D
H
M
G
M
L
A
T
V
M
N
G
-
L
A
M
R
D
--
S
L
F
R
A
---
D
--------------------------------------------------------------------------
V
N
--
A
K
L
M
S
-------
A
F
Q
------------
L
N
G
I
C
-----
D
T
Y
N
W
-
S
E
A
I
K
M
L
R
--
E
K
R
-----
V
V
----------
I
F
S
---------------
A
--
G
T
GNPFF
T
T
D
---------
S
T
----
A
C
L
R
G
I
E
I
E
AD
V
V
L
-
K
A
T
K
---------------
V
D
-----
G
V
----
Y
D
---------------
C
A
----------
K
L
Y
--------
K
N
L
S
Y
-
A
E
-------------
V
I
D
K
E
-
L
K
----
V
M
D
L
S
A
F
---------
T
L
A
R
D
H
G
M
P
I
R
V
-----------
F
N
-------
M
-
G
K
P
G
A
--
L
R
--------------------
Q
V
V
-
T
G
T
E
-------
E
G
T
T
I
C
E
G
------------------------------------------
28
Fugue
59.80
17%
-25
* C2 *
2GOP
-
?
A:
[10-347]
----------------------TFAK
F
A
Y
L
S
D
P
R
T
K
G
E
L
V
A
---------------
Y
V
-
L
T
K
A
N
L
K
DN
K
Y
E
N
T
I
V
I
-
E
-
N
-
L
K
N
N
A
------
R
R
-------
F
I
E
N
-----------------
A
T
M
-
P
R
I
S
P
D
G
-----
K
K
I
A
------------------------------
F
M
R
A
NEEK
K
-
V
S
E
I
--
W
V
A
D
L
E
T
L
S
---
S
K
K
I
L
E
-
A
K
N
I
R
S
L
E
W
N
E
D
S
R
K
-
L
L
I
V
G
--
F
K
R
R
E
---
V
------
P
A
W
E
K
-------
T
T
-----------------
F
-
W
I
F
D
--------
T
E
S
----
E
E
-------
V
I
-
E
E
F
E
K
P
RF
S
S
G
I
W
-------
H
R
D
------------
K
I
V
V
--------
N
V
P
-
H
R
E
I
I
P
Q
Y
F
K
F
W
D
-----
I
Y
----------
I
W
E
---------------
D
G
K
E
E
-----
K
M
F
---------
E
K
----
V
S
F
Y
A
V
D
S
D
GE
R
I
L
-
L
Y
G
K
---------------
P
E
-----
K
K
----
Y
M
---------------
S
E
---
H
N
K
L
Y
I
-
Y
D
G
--------
K
E
V
M
G
-
I
L
-------------
D
E
V
D
R
-
G
V
G
Q
A
K
I
K
D
G
K
V
Y
---------
F
T
L
F
E
E
G
S
V
N
L
Y
-----------
I
W
D
G
E
I
K
P
I
A
-
K
G
R
H
W
--
I
M
G
F
D
V
D
E
I
V
V
Y
L
K
E
T
ATRL
R
E
L
F
T
-
W
D
G
E
-------
E
K
Q
L
T
D
Y
N
D
P
--------
I
F
A
K
L
---------------------------
27
Fugue
59.67
20%
-36
- C2 -
5CXB
2
?
B:
[1-369]
-----------------------PSPDELK
P
F
P
T
V
Q
-
Q
T
I
F
--------------------
R
G
H
E
G
--
R
V
R
S
V
A
I
D
-
P
-
T
-
G
V
A
L
A
------
T
G
-------
G
D
D
----------------------
G
T
V
R
V
W
E
-----
L
L
T
G
------------------------------
R
Q
V
W
----
S
-
V
K
L
---
N
G
D
E
A
V
N
T
V
---
R
W
R
-
P
T
-
K
D
T
F
I
L
A
A
A
A
G
E
D
I
F
-
L
M
I
P
T
--
H
P
S
V
T
---
P
------
A
L
D
Q
A
-------
S
R
-----------------
D
-
I
L
N
A
--------
G
F
P
P
G
K
W
A
R
-------
P
G
-
T
R
L
E
D
E
G-
V
L
L
R
I
-------
T
V
R
STI---------
K
A
I
S
W
-----
H
R
R
G
D
-
H
F
A
T
V
S
P
S
G
Q
R
S
S
-----
V
A
----------
I
H
T
LSKH
L
T
Q
I
P
FRKLNG
L
--
A
Q
-----
T
A
S
F
H
PL-----
R
P
----
L
F
F
V
A
T
Q
R
S
----
I
-
R
C
Y
D
---------------
L
Q
KLELV
K
I
----
V
Q
---------------
P
G
AKW
I
S
S
F
D
V
H
P
G
G
--------
D
N
L
V
V
-
G
S
YDK
R
L
L
W
H
DLDLS
N
R
P
Y
K
-
T
M
----
R
F
H
T
E
A
I
---------
R
A
V
R
F
H
K
G
G
L
P
L
-----------
F
A
D
A
-----
S
D
D
G
S
L
Q
--
I
F
--------------------
H
G
K
-
V
P
N
D
QL
E
N
P
T
I
V
P
V
K
M
L
K
G
H
K
--------
V
V
N
K
L
G
VL
D
I
D
W
H
PREP
W
C
V
S
A
G
ADG
T
A
R
L
W
M
23
Fugue
55.22
10%
-51
- C4 -
2FZV
2
ARREH_SHIFL
A:
[23-257]
------------------------------
N
A
M
R
L
R
-
H
L
S
D
PDSLPALDKSFAIER
P
A
-
L
G
L
A
P
D
A
--
P
P
V
R
I
L
L
L
-
Y
-
G
-
S
L
R
A
R
------
S
F
-------
S
R
L
A
-----------------
V
E
E
A
A
R
L
L
Q
F
F
-----
G
A
----------------------------------------
E
-
T
R
I
F
--
D
P
S
D
L
P
L
P
------
D
Q
V
Q
-
S
D
D
H
P
A
V
K
E
L
R
A
L
S
E
-
W
S
E
G
Q
--
V
W
C
S
P
---
E
RHGQIT
S
V
M
K
A
-------
Q
I
-----------------
D
-
H
L
P
L
--------
E
M
A
----
G
I
-------
R
--------------
P
-------
T
Q
G
------------
R
T
L
A
V
-----
M
Q
V
S
G
-
G
S
Q
S
F
N
A
V
N
T
L
R
L
-----
L
G
----------
R
W
M
---------------
R
--
M
F
-----
T
I
P
---------
N
Q
----
S
S
I
A
K
A
F
Q
E
----
F
-
D
-----------------------------------------------------------------------------------------------
A
A
-
G
R
----
M
K
P
S
P
Y
Y
---------
D
R
I
A
D
V
M
E
E
L
V
R
-----------
F
T
A
L
-----
V
-
R
P
H
R
E
--
A
L
--------------------
T
D
R
-
Y
S
E
R
-------
K
A
A
G
H
V
I
-------------------------------------------
12
HHSearch
53.98
14%
-85
- C3 -
3TQM
1
?
A:
[9-91]
-------------------------------------------------------------------------------
G
-
V
D
I
S
P
------
A
L
-------
R
E
L
T
-----------------
E
K
K
L
H
R
I
Q
P
C
R
-----
D
E
I
S
------------------------------
N
I
H
I
----
I
-
F
H
I
N
--
K
L
---
K
K
I
V
---
D
A
N
V
K
L
-
P
G
S
T
I
N
A
Q
A
E
S
D
D
M
Y
K
T
V
D
L
L
--
M
H
K
L
E
---
T
------
Q
L
S
K
Y
-------
K
A
-----------------
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
HHSearch
52.80
12%
-75
- C3 -
4HEI
14
?
A:
[9-92]
-------------------------------------------------------------------------------
H
-
I
D
L
T
D
------
S
M
-------
Q
D
Y
V
-----------------
H
S
K
F
D
K
L
E
R
F
F
-----
D
H
I
N
------------------------------
H
V
Q
V
----
I
-
L
R
V
E
--
K
L
---
R
Q
I
A
---
E
A
T
L
H
V
-
N
Q
A
E
I
H
A
H
A
D
D
E
N
M
Y
A
A
I
D
S
L
--
V
D
K
L
V
---
R
------
Q
L
N
K
H
-------
K
E
-----------------
K
-
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
49.14
26%
-20
- C3 -
3UK2
6
PANC_BURTA
A:
[142-282]
----------------------------------------------------------------------
P
R
V
A
V
F
-----
G
K
K
D
Y
------
Q
Q
L
M
I
V
R
R
M
C
Q
Q
L
-----------------
A
L
P
V
E
I
V
A
A
E
T
VRDAD
G
L
A
L
------------------------------
S
S
R
N
----
R
Y
L
S
E
A
--
E
R
A
E
A
P
E
L
A
---
K
T
L
A
R
V
-
R
D
A
V
L
D
G
E
R
D
L
A
A
I
E
-
R
--------------
R
------
A
V
A
H
L
-------
S
A
-----------------
R
G
W
Q
P
D
--------
Y
V
S
----
I
R
-------
R
R
-
E
N
L
V
A
P
--
S
A
A
Q
I
-------
E
A
G
------------
D
P
L
V
V
-----
L
T
A
A
K
-
L
G
A
T
R
L
I
D
N
L
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
49.13
13%
-58
- C3 -
1IMU
-
RAIA_HAEIN
A:
[4-98]
-------------------------------------------------------------------------
N
I
T
-
S
K
Q
-
M
D
I
T
P
------
A
I
-------
R
E
H
L
-----------------
E
E
R
L
A
K
L
G
K
W
Q
-----
T
Q
L
I
------------------------------
S
P
H
F
----
V
-
L
N
K
V
--
P
N
---
G
F
S
V
---
E
A
S
I
G
T
-
P
L
G
N
L
L
A
S
A
T
S
D
D
M
Y
K
A
I
N
E
V
--
E
E
K
L
E
---
R
------
Q
L
N
K
L
-------
Q
H
-----------------
K
-
S
E
S
R
--------
R
A
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
49.09
12%
-79
- C3 -
2RQL
-
HPF_ECOLI
A:
[9-95]
-------------------------------------------------------------------------------
N
-
V
E
I
T
E
------
A
L
-------
R
E
F
V
-----------------
T
A
K
F
A
K
L
E
Q
Y
F
-----
D
R
I
N
------------------------------
Q
V
Y
V
----
V
-
L
K
V
E
--
K
V
---
T
H
T
S
---
D
A
T
L
H
V
-
N
G
G
E
I
H
A
S
A
E
G
Q
D
M
Y
A
A
I
D
G
L
--
I
D
K
L
A
---
R
------
Q
L
T
K
H
-------
K
D
-----------------
K
-
L
K
Q
H
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
48.59
14%
-7
- C2 -
5A7V
8
?
A:
[24-388]
ASGQPSNDK
K
N
V
L
P
DWAFGGFERPQGANPV
I
S
P
I
E
N
-
T
K
F
Y
---------------
C
--
P
M
T
Q
D
Y
V
--
A
W
E
S
N
D
T
F
N
P
-
A
-
A
T
L
H
D
------
G
K
-------
I
V
V
L
-----------------
Y
R
A
E
D
K
---
S
G
-----
V
G
I
G
------------------------------
H
R
T
S
----
R
-
L
G
Y
A
--
T
S
S
D
G
I
H
F
K
R
E
K
T
P
V
F
Y
P
-
D
N
D
T
Q
K
K
L
E
W
P
G
G
C
E
-
D
P
R
I
A
--
V
T
A
E
G
---
L
------
Y
V
M
T
Y
-------
T
Q
W
NRH
I
P
R
L
A
I
A
T
S
RNLK
D
-
W
T
K
H
GPAFA---
K
A
Y
----
D
G
-------
K
F
-
F
N
L
G
C
K
--
S
G
S
I
L
-------
T
E
V
V
NG
K
Q
V
I
K
K
I
DG
K
Y
F
M
Y
-----
W
G
E
E
H
-
V
F
A
A
T
S
E
D
L
V
N
W
T
-----
P
Y
----------
V
N
T
---------------
D
--
G
S
-----
L
R
K
L
F
S
P
R
D
GHF
D
S
----
Q
L
T
E
C
G
P
P
A
----
I
-
Y
T
P
K
G
I
V
L
L
Y
N
G
K
N
S
ASRG
D
K
-----
R
Y
----
T
A
---------------
N
V
---
Y
A
A
G
Q
A
-
L
F
D
--------
A
N
D
P
T
-
R
F
-------------
I
T
R
L
D
E
P
F
----
F
R
P
M
D
S
F
---------
E
K
S
G
Q
Y
V
D
G
T
V
F
-----------
I
E
G
M
-----
V
-
Y
Y
K
D
K
W
Y
L
Y
--------------------
Y
G
C
-
A
D
S
K
-------
V
G
M
A
I
Y
N
P
K
K
--------
P
A
A
A
D
P
LPA-----------------------
29
Fugue
48.18
17%
-6
- C1 -
4DIM
-
?
A:
[3-400]
----------DN
K
R
L
L
I
L
G
AGRGQ
L
G
L
Y
K
A
A
K
E
L
G
I
-
H
T
I
A
---------------
G
T
M
P
N
A
-
H
K
P
--
C
L
N
L
A
D
E
I
-
S
-
Y
M
D
I
S
N
P
------
D
E
-------
V
E
Q
K
V
K
DLNLD
G
A
A
T
C
CLDTG
I
V
S
L
A
R
I
C
D
K
E
-----
N
L
V
G
L
N
E
E
A
A
I
M
C
G
D
K
Y
K
M
K
E
A
F
K
K
Y
NVNTARHF
V
V
R
N
----
E
-
N
E
L
K
--
N
A
L
E
N
L
K
L
----
P
V
I
V
K
A
-
T
D
L
I
Y
I
A
K
K
E
E
E
A
I
D
-
G
F
N
E
T
M
N
L
T
K
R
D
---
Y
------
C
I
V
E
E
F
I
E
G
Y
E
F
G
A
-----------------
Q
-
A
F
V
Y
KNDVL
F
V
M
P
H
G
----
D
E
-------
T
Y
M
S
H
T
A
V
P
--
V
G
H
Y
V
-------
P
L
D
------------
V
K
D
D
I
-----
I
E
K
T
K
-
T
E
V
K
K
A
I
K
A
L
G
L
N
N
C
A
V
N
V
D
M
---------
I
L
K
---------------
D
--
N
E
-----
V
Y
I
---------
I
E
----
L
T
G
R
V
G
A
N
C
----
L
P
E
L
V
E
---------------
I
N
-----
Y
G
----
I
E
Y
Y
K
M
I
A
S
M
A
I
SENP
L
V
F
---
W
S
Q
K
S
K
-
E
N
K
--------
A
G
L
A
R
M
I
I
-------------
E
T
E
K
S
-
G
I
----
L
K
E
I
L
N
S
---------
N
A
K
D
D
D
I
V
E
I
T
F
-----------
F
K
E
E
-----
N
-
D
E
I
K
K
--
F
E
--------------------
N
S
N
D
C
I
G
Q
-------
I
I
V
K
E
E
T
L
D
K
--------
C
K
D
K
L
D
V
I
I
N
N
I
N
I
I
L
K---------------
10
HHSearch
46.86
9%
-69
- C3 -
1L4S
-
RAIA_ECOLI
A:
[8-97]
-------------------------------------------------------------------------------
Q
-
M
E
I
T
P
------
A
I
-------
R
Q
H
V
-----------------
A
D
R
L
A
K
L
E
K
W
Q
-----
T
H
L
I
------------------------------
N
P
H
I
----
I
-
L
S
K
E
--
P
Q
---
G
F
V
A
---
D
A
T
I
N
T
-
P
N
G
V
L
V
A
S
G
K
H
E
D
M
Y
T
A
I
N
E
L
--
I
N
K
L
E
---
R
------
Q
L
N
K
L
-------
Q
H
-----------------
K
-
G
E
A
R
--------
R
A
A
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
HHSearch
46.78
27%
-52
- C3 -
3K2T
-
?
A:
[2-56]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
-
R
T
-------------
K
Q
----
K
P
----
M
D
S
E
E
A
V
---------
L
Q
M
N
L
L
G
H
S
F
Y
V
-----------
Y
T
D
A
-----
E
-
T
N
G
T
N
--
I
V
--------------------
Y
S
R
-
K
D
G
K
-------
Y
G
L
I
E
T
--------------------------------------------
1
PsiBlast_PDB
45.42
51%
-44
- C3 -
3LYV
-
RAFY_STRP6
A:
[27-55]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
H
D
F
F
I
-----------
Y
T
D
S
-----
E
-
D
G
A
T
N
--
I
L
--------------------
Y
R
R
-
E
D
G
N
-------
L
G
L
I
----------------------------------------------
8
HHSearch
44.22
23%
-50
- C3 -
3K2T
-
?
A:
[1-56]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
I
-------
V
R
T
------------
K
Q
--------
K
P
M
D
S
-
E
E
A
V
L
Q
M
N
L
L
G
H
S
-----
F
Y
----------
V
Y
T
---------------
D
--
A
E
-----
T
N
G
---------
T
N
----
I
V
Y
S
R
K
D
G
K
----
Y
-
G
L
I
E
---------------
T
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
44.17
44%
-38
- C3 -
3K2T
-
?
A:
[26-54]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
H
S
F
Y
V
-----------
Y
T
D
A
-----
E
-
T
N
G
T
N
--
I
V
--------------------
Y
S
R
-
K
D
G
K
-------
Y
G
L
I
----------------------------------------------
13
HHSearch
31.28
14%
41
- C3 -
2YWQ
-
?
A:
[10-95]
-------------------------------------------------------------------------------
N
-
L
E
I
T
D
------
A
I
-------
R
D
Y
V
-----------------
E
K
K
L
A
R
L
D
R
Y
Q
-----
D
G
E
L
------------------------------
M
A
K
V
----
V
-
L
S
L
A
--
G
----
K
A
R
A
---
E
I
Q
V
D
L
-
P
G
G
L
V
R
V
E
E
E
D
A
D
L
Y
A
A
I
D
R
A
--
V
D
R
L
E
---
T
------
Q
V
K
R
F
-------
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
25.86
27%
16
* C3 *
3LYV
-
RAFY_STRP6
A:
[2-60]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
V
V
-
R
T
-------------
K
N
V
T
L
-
K
P
----
M
D
V
E
E
A
R
---------
L
Q
M
E
L
L
G
H
D
F
F
I
-----------
Y
T
D
S
-----
E
-
D
G
A
T
N
--
I
L
--------------------
Y
R
R
-
E
D
G
N
-------
L
G
L
I
E
A
K
L
E
-----------------------------------------