@TOME V2.3
(Nov 2016)

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA4322: (2016-02-26 )
MSEQTPEQPSTAPNPALQRQRASQLAQALRTELQKALIGQGAVIDDVLTALLAGGHVLVEGVPGLGKTLLVRALARCFDGGFARIQFTPDLMPSDVTGHAVYDLASEQFKLRKGPVFTHLLLADEINRAPAKTQAALLEVMQERQVTLEGRALPVPQPFMVLATQNPIEQEGTYPLPEAELDRFMLKLRIDYPAEAEEQTLVRQVTRSARSDMLDVANLRPLLKDKDVLALQRIASDLPIDDQVLDYAVRLARTTRNWPGLALGAGPRASIALVRCGRARALLRGGEFVVPDDIKGCALAVLRHRVRLSPELDIEGLSVDQVLQQLLDQVPAPRV

Atome Classification :

(20 SA) .........10........20........--30.......-----.40........50---------------.--------------.----------------.-------.--.---...60.....----...70...------.....------80----..-----......--.90........100-.........-110---..---.-...---...----------120.......-----------130-..------------....---------...140......--------.--150----..----.......160.......----170..----------.....180--..-.....190..---....-..200...--.--------...210-........220-----.......230---...----....240.......250.......---------260--------.........270.......280....-.------..290.---......300-------.......-310.......320.......330...------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSEQTPEQPSTAPNPALQRQRASQLAQAL--RTELQKALI-----GQGAVIDDVLTAL---------------L--------------A----------------G-------G--H---VLVEGVPGLG----KTLLVRAL------ARCFD------G-----GF-----ARIQFT--PDLMPSDVTGHA---VYDLASEQF-K-----LR---K-GPV---FTH----------LLLADEINRA-----------P---AK------------TQAA---------LLEVMQERQVTL--------E--G------RA----LPVPQPFMVLATQNPIE----QEGTY----------PLPEAELD--RF-MLKLRI-DYP---AEAE-EQTLVRQV--T--------RSARS--DMLDVANLRPL-----LKDKDVLALQ---RIA----SDLPIDDQVLDYAVRLARTTRNWP---------G----------LALGAGPRASIALVRCGRARALLRGG-E------FVVPDD---IKGCALAVL-------RHRVRLS-PELDIEGLSVDQVLQQLLDQVPAPRV------------------------------------------------------------------------------------------------------------------------------------------------------------------------
66 HHSearch 97.5241%-122 - C1 -2R44 ? A:[11-330] ------------------SLYYRNKIKEV--IDEVGKVVV-----GQKYMINRLLIGI---------------C--------------T----------------G-------G--H---ILLEGVPGLA----KTLSVNTL------AKTMD------L-----DF-----HRIQFT--PDLLPSDLIGTM---IYNQHKGNF-E-----VK---K-GPV---FSN----------FILADEVNRS-----------P---AK------------VQSA---------LLECMQEKQVTI--------G--D------TT----YPLDNPFLVLATQNPVE----QEGTY----------PLPEAQVD--RF-MMKIHL-TYL---DKES-ELEVMRRV--S--------NMNF-------NYQVQKI-----VSKNDVLEIR---NEI----NKVTISESLEKYIIELVFATRFPAEYGLEAEASY----------ILYGASTRAAINLNRVAKAMAFFNNR-D------YVLPED---IKEVAYDIL-------NHRIILN-YEAEAEGISTRQIIETILRKVNITK-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 93.5840%-123 - C1 -2R44 ? A:[24-326] ---------------------------------EVGKVVV-----GQKYMINRLLIGI---------------C--------------T----------------G-------G--H---ILLEGVPGLA----KTLSVNTL------AKTMD------L-----DF-----HRIQFT--PDLLPSDLIGTM---IYNQHKGNF-E-----VK---K-GPV---FSN----------FILADEVNRS-----------P---AK------------VQSA---------LLECMQEKQVTI--------G--D------TT----YPLDNPFLVLATQNPVE----QEGTY----------PLPEAQVD--RF-MMKIHL-TYL---DKES-ELEVMRRV--S--------NMNFN-------YQVQKI-----VSKNDVLEIR---NEI----NKVTISESLEKYIIELVFATR-FP---------AEYGLEAEASYILYGASTRAAINLNRVAKAMAFFNNR-D------YVLPED---IKEVAYDIL-------NHRIILN-YEAEAEGISTRQIIETILRKV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57 Fugue 71.8220% -85 - C1 -3NBX RAVA_ECOLI X:[5-499] -----------------HPHLLAERISRL--SSSLEKGLY-----ERSHAIRLCLLAA---------------L--------------S----------------G-------E--S---VFLLGPPGIA----KSLIARRL------KFAFQ------N-----A---------RAF--EYLMTRFSTPEE---VFGPLSERL-T-----SG---Y-LPE---AE-----------IVFLDEIWKA-----------G---PA------------ILNT---------LLTAINERQFRN--------G--A------HV----EKIPMRLLVAASNELPE----ADSSL-------------EALYD--RM-LIRLWL-DKV---QDKA-NFRSMLTS--Q--------QDEND--NPVPD---ALQ-----VTDEEYERWQ---KEI----GEITLPDHVFELIFMLRQQLDKLP---------D-----------APYVSDRRWKKAIRLLQASAFFSGR-S------AVAPVD---LILLKDCLWYDAQSLNLIQQQID-VLMTGHAWQQQGMLTRLGAIVQRHLQLQQQQSDKTALTVIRLGGIFSRRQQYQLPVNVTASTLTLLLQKPLKLHDMEVVHISFERSALEQWLSKGGEIRGKLNGIGFAQKLNLEVDSAQHLVVRDVSLQGSTLALPGSLPGEIKQQLEELESDWRKQHALFSEQQKCLFIPGDWLGRIEASLQDVGAQIRQAQQ
2 PsiBlast_PDB 67.5923% -86 - C1 -3NBX RAVA_ECOLI X:[5-289] -------------HPHLLAERISRLS------SSLEKGLY-----ERSHAIRLCLLAA---------------L--------------S----------------G-------E--S---VFLLGPPGIA----KSLIARRLKFAFQNARAFE------Y-----LM-----TRFS-T--PEEVFGPLS-------------E--R-----LT---S-GYLP--EAE----------IVFLDEIWKA-----------G---PA------------ILNT---------LLTAINERQFRN--------G--A------HV----EKIPMRLLVAASNELPE----ADSSL-------------EALYD--RM-LIRLWL-D------KVQ-DKANFRSM--L--------TSQQD--E-----NDNPVPDALQVTDEEYERWQ---KEI----GEITLPDHVFELIFMLRQQLDKLP---------D----------APYVSDRRWKKA-IRLLQASAFFSGR-S------AVAPVDLILLKDC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
67 HHSearch 62.5422% -83 - C1 -3NBX RAVA_ECOLI X:[10-289] ----------------------AERISRL--SSSLEKGLY-----ERSHAIRLCLLAA---------------L--------------S----------------G-------E--S---VFLLGPPGIA----KSLIARRL------KFAFQ------NAR---AF-----EYL-MT--RFSTPEEVFGPL---S--------ER-----LT---S-GYLP--EAE----------IVFLDEIWKA-----------G---PA------------ILNT---------LLTAINERQFRN--------G--A------HV----EKIPMR-LLVAASNELP-----EA-D----------SSLEALYD--RM-LIRLWL-DKV---QDKANFRSMLTSQ--Q--------DENDN--P----VPDALQ-----VTDEEYERWQ---KEI----GEITLPDHVFELIFMLRQQLDKL----------P----------DAPYVSDRRWKKAIRLLQASAFFSGR-S------AVAPVD---LILLKDC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
72 HHSearch 62.4421% -94 - C1 -3F8T - ? A:[202-487] ----------------------KDPLTTF--ARAIAP-LP-----GAEEVGKMLALQL---------------F--------------S----------------CVGKNSERL--H---VLLAGYPVVC----SEILHHVL------DHLAP------R-----GV-----YV-DLR---RTELTDLTAVL---KED---RGW-A-----LR---A-GAAVLADGG----------ILAVDHLEGA-----------P---EP------------HRWA---------LMEAMDKGTVTV--------D--G------I------ALNARCAVLAAINPGEPSDPPIARI----------DLDQDFLS--HF-DLIAFLG-----------------------------------------------V-----PSYTLLRRYL---LYAIREHPAPELTEEARKRLEHWYETRREEV---------EERLGMGL---PTLPVTRRQLESVERLAKAHARMRLS-D------DVEPED---VDIAAELVD-------WYL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
59 Fugue 57.3420% -59 - C1 -1G8P - BCHI_RHOCB A:[18-350] ----RPVFPFSAIVGQEDMKLALLLTAVD--PGIGGVLVF-----GDRGTGKSTAVRA---------------L--------------A----------------A-------L--L---PEIEAVEGCPVSSPNVEMIPDW------ATVLS------T-----NV-----IRKPTP--VVDLPLGVSEDR---VVGALDIER-A-----IS---K-GEK---AFEPGLLARANRGYLYIDECNLL-----------E---DH------------IVDL---------LLDVAQSGENVV--------ERDG------LS----IRHPARFVLVGSGNPEE----GD--------------LRPQLLD--RF-GLSVEV-LSPRDVETRV-EVIRRRDT--Y--------DADPK--AFLEEWRPKDM-----DIRNQILEAR---ERL----PKVEAPNTALYDCAALCIALGS--------------------------DGLRGELTLLRSARALAALEGA-T------AVGRDH---LKRVATMAL-------SHRLRVA-RTVEETLP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
87 HHSearch 56.7919% -88 - C1 -1SXJ RFC3_YEAST C:[12-239] ---------------------NLPWVEKY--RPETLDEVY-----GQNEVITTVRKFV---------------D--------------EGK--------------L-------P--H---LLFYGPPGTG----KTSTIVAL------AREIY------G-----KNYSNMVLELNAS--DDRGIDVVRNQI---KDFA--STR-Q-----IF---S---K---GFK----------LIILDEADAM-----------T---NA------------AQNA---------LRRVIERYT-------------------------------KNTRFCVLANYAH-------------------KLTPALLS--QC-TR-FRF-QPL---PQEA-IERRIANV--L--------VH-----------------------------------------EKLKLSPNAEKALIELSNG------------------------------DMRRVLNVLQSCKATLDNPDE-D------EISDDV---IYECCGAP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
84 HHSearch 55.8016% -81 - C1 -1OFH HSLU_HAEIN A:[8-299] ---------------------------EI--VSELDQHII-----GQADAKRAVAIAL---------------R--------------NRWRRMQLQEPLRHEVTP-------K--N---ILMIGPTGVG----KTEIARRL------AKLAN------A-----PF-----IKVEAT--KFTEVGY-VGKE---VDSII-RDL-TDSAGGAI---D-AVE---QNG----------IVFIDEIDKI-----------C---KKGEYSGADVSREGVQRD---------LLPLVEGSTVST--------K--H------GM----V-KTDHILFIASGAFQV-----ARPS----------DLIPELQG--RL-PIRVEL-TAL---SAAD-FERILTEP--H--------ASLTE----------------------QYKALMA--TEG----VNIAFTTDAVKKIAEAAFRVNE----------------------KTENIGARRLHTVMERLMDKISFSAS-DMNGQTVNIDAAY---VADALGEV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
76 HHSearch 54.8116% -71 * C1 *3PFI ? A:[23-253] ----------------------------L--RPSNFDGYI-----GQESIKKNLNVFI---------------AAAKKRNE-------C----------------L-------D--H---ILFSGPAGLG----KTTLANII------SYEMS------A-----NI-----KTTAAP--MIEKSGDLA------------AIL-T------------NLS---EGD----------ILFIDEIHRL-----------S---PA------------IEEV---------LYPAMEDYRL----------------------AQTIKIDLPKFTLIGATTRAG-------------------MLSNPLRD--RF-GMQFRL-EFY---KDSE-LALILQKA--A--------LK-----------------------------------------LNKTCEEKAALEIAKRSRS------------------------------TPRIALRLLKRVRDFADVNDE-E------IITEKR---ANEALNS-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
88 HHSearch 54.1417% -79 - C1 -1SXJ RFC2_YEAST D:[26-264] -----------------------PWVEKY--RPKNLDEVT-----AQDHAVTVLKKTL---------------K--------------SAN--------------L-------P--H---MLFYGPPGTG----KTSTILAL------TKELYGPDLMKS-----RI-----LELNAS--DERGISIVREKVKNFARLTVSKPS-K-----HDLENY-PCP---PYK----------IIILDEADSM-----------T---AD------------AQSA---------LRRTMETYS-------------------------------GVTRFCLICNYVT-------------------RIIDPLAS--QC-SK-FRF-KAL---DASN-AIDRLRFI--S--------EQ-----------------------------------------ENVKCDDGVLERILDISAG------------------------------DLRRGITLLQSASKGAQYLGDGK------NITSTQ---VEELAGVVP-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
60 Fugue 53.7418% -59 - C1 -1HQC RUVB_THET8 A:[5-318] -----ALRPKTLDEYIGQERLKQKLRVYL--EAAKARKE-------------------------------------------------P----------------L-------E--H---LLLFGPPGLG----KTTLAHVI------AHELG------V-----NL-----RVTSGP--AIEKPGDLAAIL---ANSLEEGD----------------------------------ILFIDEIHRL-----------S---RQ------------AEEH---------LYPAMEDFVMDIVIGQGPAAR--T------IR----LELPRFTLIGATTRP------GLITA----------PLL----S--RF-GIVEHL-EYY---TPEE-LAQGVMRD--ARLLGVRITEEAAL--EIGRRSRGTMR-----VAKRLFRRVRDFAQVA----GEEVITRERALEALAALGLDEL-----------G----------LEKRDREILEVLILRFGGGPVGLATL-A------TALSED---PGTLEEVHE-------PYLIRQGLLKRTPRGRVPTELAYRHLGY-PPPV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
81 HHSearch 53.4519% -93 - C1 -3VFD SPAST_HUMAN A:[114-300] -----------------------------------FDDIA-----GQDLAKQALQEIVILPSLRPELFTGLR-A--------------P----------------A-------R--G---LLLFGPPGNG----KTMLAKAV------AAESN------A-----TF-----FNISAA--SL---------G---EKLV-RALF-A-----VA-----REL---QPS----------IIFIDQVDSL-----------LDASRR------------LKTE---------FLIEFDGVQ--------------------------------RVLVMGATNRPQ-------------------ELDEAVLR--RF-IKRVYV-SLP---NEET-RLLLLKNL--L--------CK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 53.4524% -85 - C1 -3PVS RARA_ECOLI A:[15-196] --------------PLAARMRPENLAQYI--G---QQHLL-----AAGKPLPRAIEA--------------------------------------------------------G--HLHSMILWGPPGTG----KTTLAEVI------ARYAN------A-----DV-----ERISAV---------TSGVK---EIREAIERA-R-----QN---R-NAG---RRT----------ILFVDEVHRF--------------------------------A---------FLPHIEDGTIT-------------------------------FIGATTENP---------SF----------ELNSALLS--RA-RVYLLK-SLS---TEDI-EQVLTQAM--E--------DKTR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
93 HHSearch 53.4019% -81 - C1 -3B9P A:[19-276] ----------------------------------EWTDIA-----GQDVAKQALQEMV---------------ILPSVRPELFTGLRAP----------------A-------K--G---LLLFGPPGNG----KTLLARAV------ATECS------A-----TF-----LNISAA--SLTSK--YVGDG---EKLV--RAL-F-----AV---A-RHM---QPS----------IIFIDEVDSL-----------L---SE------------R---EASRRLKTEFLVEFDGLP--------------------------------RIVVLAATNRPQ-------------------ELDEAALR--RF-TKRVYV-SLP---DEQT-RELLLNRL--L--------QK-----------------------------------------QGSPLDTEALRRLAKITDG-----------------------------YSGSDLTALAKDAALEPIRELN--ISAMR-AITEQD---FHSSLKRIR-------RSV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
90 HHSearch 53.2620% -89 - C1 -2CHQ RFCS_ARCFU A:[6-176] -----------------------IWVEKY--RPRTLDEVV-----GQDEVIQRLKGYV---------------E--------------RKN--------------I-------P--H---LLFSGPPGTG----KTATAIAL------ARDLF------GENWRDNF-----IEMNAS--DERGIDVVRHKI---K-----EFA-R-----TA---PIGGA---PFK----------IIFLDEADAL-----------T---AD------------AQAA---------LRRTMEMYS-------------------------------KSCRFILSCNYVS-------------------RIIEPIQS--RC-AV-FRF-KPV---PKEA-MKKRLLEI--C--------EK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
61 Fugue 53.1714% -44 - C1 -1IQP RFCS_PYRFU A:[2-327] -----------SEEIREVKVLEKPWVEKY--RPQRLDDIV-----GQEHIVKRLKHYV---------------K--------------T----------------G-------SMPH---LLFAGPPGVG----KTTAALAL------ARELF------G-----EN-----WRHNFL--ELNASDERGINV---IREKVKEFA-R-----TK---PIGGA---SFK----------IIFLDEADAL-----------T---QD------------AQQA---------LRRTMEMFSSNV--------R--F------IL----SCNYSSKIIEPIQSRCA----IFRFR----------PLRDEDIA--KR-LRYIAE-NEG---LELT-EEGLQAIL--Y--------IAEGD--MRRAINILQAA-----AALDKKITDE---NVF----MVA--SRARPEDIREMMLLALKGN---------F----------LKAREKLREILLKQGLSGEDVLVQMH-K------EVFNLP---IEEPKKVLL-------ADKIGEY-NFRLVEGANEIIQLEALLAQFTLIGKK-----------------------------------------------------------------------------------------------------------------------------------------------------------------------
78 HHSearch 53.0022% -75 - C1 -1HQC RUVB_THET8 A:[6-238] ----------------------------L--RPKTLDEYI-----GQERLKQKLRVYL---------------E--------------AAKARKEP---------L-------E--H---LLLFGPPGLG----KTTLAHVI------AHELG------V-----NL-----RVTSGP--AIEKPGDLAAIL---A------N--S-----LE-----------EGD----------ILFIDEIHRL-----------S---RQ------------AEEH---------LYPAMEDFVMDI--------VI-GQGPAARTI----RLELPRFTLIGATTRPG-------------------LITAPLLS--RF-GIVEHL-EYY---TPEE-LAQGVMRD--A--------RL-----------------------------------------LGVRITEEAALEIGRRSRG------------------------------TMRVAKRLFRRVRDFAQVAGE-E------VITRER---ALEALAAL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 52.2621% -45 - C1 -4FDG - MCM_SULSO B:[292-579] -----------AKDPWIRDRIISSIAPSIYGHWELKEALALALFGGVPKVLED--TRI---------------R--------------G----------------D-------I--H---ILIIGDPGTA----KSQMLQFI------SRV---------------A-----PRAVYTTGKGSTAAGLTAAV---VREKGTGEY-Y-----LE---A-GAL---VLADGG-------IAVIDEIDKM-----------R---DE------------DRVA---------IHEAMEQQTVSIAK------A--G------IV----AKLNARAAVIAAGNP------KFGRYISERPVSDNINLPPTILS--RFDLIFILK-DQP---GE-Q-DRELANYILDV--------HSGKSTKNIIDIDTLRKY-----IAYARKYVTP---KIT----SEAK--NLITDFFVEMRKKSSETP---------D----------SPILITPRQLEALIRISEAYA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
85 HHSearch 51.5718% -78 - C1 -3H4M PAN_METJA A:[15-263] ----------------------------------RYEDIG-----GLEKQMQEIREVVELPLKHPELFEKVGIE--------------P----------------P-------K--G---ILLYGPPGTG----KTLLAKAV------ATETN------A-----TF-----IRVVGS--ELVKK--FIGEG---ASLV--KDI-F-----KL---A-KEK---APS----------IIFIDEIDAIAAKRTDALTGGD---RE------------VQRT---------LMQLLAEMDG--------------------------FDARGDVKIIGATNRPD-------------------ILDPAILRPGRF-DRIIEV-PAP---DEKG-RLEILKIH--T--------RKM-----------------------------------------NL-AEDVNLEEIAKMT-----------------------------EGCVGAELKAICTEAGMNAIRELR-D------YVTMDD---FRKAVEKIM-------EKKK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------