@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00018_GRB2_H: (2014-08-10 )
MEAIAKYDFKATADDELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEMKPHPWFFGKIPRAKAEEMLSKQRHDGAFLIRESESAPGDFSLSVKFGNDVQHFKVLRDGAGKYFLWVVKFNSLNELVDYHRSTSVSRNQQIFLRDIEQVPQQPTYVQALFDFDPQEDGELGFRRGDFIHVMDNSDPNWWKGACHGQTGMFPRNYVTPVNRNV

Atome Classification :

(57 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_K_22(3N84)
GRB2_HUMAN
[Raw transfer]




C78_T_20(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_W_23(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_Q_17(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_O_15(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_R_18(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_M_13(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_U_21(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_S_19(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_V_22(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_N_14(1CJ1)
GRB2_HUMAN
[Raw transfer]




C78_P_16(1CJ1)
GRB2_HUMAN
[Raw transfer]




YVN_E_5(2HUW)
GRB2_HUMAN
[Raw transfer]




YVN_D_4(2HUW)
GRB2_HUMAN
[Raw transfer]




FYQ_A_3(3IMD)
GRB2_HUMAN
[Raw transfer]




AYI_A_3(3IMJ)
GRB2_HUMAN
[Raw transfer]




AYI_B_4(3IMJ)
GRB2_HUMAN
[Raw transfer]




FYQ_B_8(3IMD)
GRB2_HUMAN
[Raw transfer]




TVN_A_2(3C7I)
GRB2_HUMAN
[Raw transfer]




S1S_C_3(2AOA)
GRB2_HUMAN
[Raw transfer]




S1S_K_11(2AOB)
GRB2_HUMAN
[Raw transfer]




S1S_E_5(2AOB)
GRB2_HUMAN
[Raw transfer]




FYI_A_2(3IN8)
GRB2_HUMAN
[Raw transfer]




YEN_A_2(3KFJ)
GRB2_HUMAN
[Raw transfer]




AYQ_C_4(3IN7)
GRB2_HUMAN
[Raw transfer]




AYQ_A_3(3IN7)
GRB2_HUMAN
[Raw transfer]




S1S_L_12(2AOB)
GRB2_HUMAN
[Raw transfer]




CHAIN_H_8(3N84)
GRB2_HUMAN
[Raw transfer]

-

GOL_C_3(2H46)
GRB2_HUMAN
[Raw transfer]




S1S_F_6(2AOB)
GRB2_HUMAN
[Raw transfer]




S1S_D_4(2AOA)
GRB2_HUMAN
[Raw transfer]




GOL_B_7(3S8N)
GRB2_HUMAN
[Raw transfer]




CHAIN_B_2(3S8O)
GRB2_HUMAN
[Raw transfer]

-

GOL_B_3(3N8M)
GRB2_HUMAN
[Raw transfer]




CHAIN_I_2(1ZFP)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_L_12(3N84)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_J_10(3N84)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_I_9(3N84)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_G_7(3N84)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_B_2(3WA4)
?
[Raw transfer]

-

CHAIN_E_5(3N7Y)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_K_11(3N84)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_L_8(1FYR)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_D_4(3N7Y)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_I_2(1BMB)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_J_6(1FYR)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_K_7(1FYR)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_I_5(1FYR)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_F_6(3N7Y)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_B_2(3S8L)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_B_2(3OVE)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_B_2(3S8N)
GRB2_HUMAN
[Raw transfer]

-

ACE_J_10(1FYR)
GRB2_HUMAN
[Raw transfer]




CHAIN_C_3(2H5K)
GRB2_HUMAN
[Raw transfer]

-

ACE_K_11(1FYR)
GRB2_HUMAN
[Raw transfer]




CHAIN_B_2(3N8M)
GRB2_HUMAN
[Raw transfer]

-

ACE_I_9(1FYR)
GRB2_HUMAN
[Raw transfer]




CHAIN_L_2(3MXC)
GRB2_HUMAN
[Raw transfer]

-

ACE_L_12(1FYR)
GRB2_HUMAN
[Raw transfer]




CHAIN_L_2(3MXY)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_I_2(1QG1)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_E_5(1R1P)
GRAP2_MOUSE
[Raw transfer]

-

CHAIN_I_2(1TZE)
GRB2_HUMAN
[Raw transfer]

-

CHAIN_L_2(1BM2)
GRB2_HUMAN
[Raw transfer]

-

P33_F_6(2AOA)
GRB2_HUMAN
[Raw transfer]




14 PsiBlast_PDB 61.47100%-133 - C3 -3S8N 8.3 GRB2_HUMAN
13 PsiBlast_PDB 61.27100%-130 - C3 -3S8L 7.9 GRB2_HUMAN
28 PsiBlast_CBE 61.22100%-134 - C3 -3N84 8.7 GRB2_HUMAN
29 PsiBlast_CBE 61.15100%-141 - C3 -3IN7 7.8 GRB2_HUMAN
20 PsiBlast_PDB 61.12100%-139 - C3 -3C7I 8.0 GRB2_HUMAN
8 PsiBlast_PDB 61.05100%-140 - C3 -3IN7 7.5 GRB2_HUMAN
9 PsiBlast_PDB 60.94100%-136 - C3 -3IN8 8.2 GRB2_HUMAN
4 PsiBlast_PDB 60.88100%-130 - C3 -3OVE 8.3 GRB2_HUMAN
26 PsiBlast_CBE 60.83100%-142 - C3 -3N84 8.2 GRB2_HUMAN
7 PsiBlast_PDB 60.48100%-140 - C3 -3IMJ 7.8 GRB2_HUMAN
30 PsiBlast_CBE 60.47100%-143 - C3 -3IMJ 8.4 GRB2_HUMAN
25 PsiBlast_CBE 60.47100%-138 - C3 -3N84 8.5 GRB2_HUMAN
15 PsiBlast_PDB 60.46100%-129 - C3 -3S8O 1.8 GRB2_HUMAN
11 PsiBlast_PDB 60.44100%-136 - C3 -3N8M 7.6 GRB2_HUMAN
31 PsiBlast_CBE 60.41100%-132 - C3 -3IMD 6.9 GRB2_HUMAN
27 PsiBlast_CBE 60.25100%-132 - C3 -3N84 8.5 GRB2_HUMAN
19 PsiBlast_PDB 60.12100%-137 - C3 -2HUW 7.9 GRB2_HUMAN
24 PsiBlast_CBE 60.00100%-135 - C3 -3N84 8.6 GRB2_HUMAN
5 PsiBlast_PDB 59.92100%-129 - C3 -3N84 8.8 GRB2_HUMAN
1 PsiBlast_PDB 59.87100%-135 - C3 -1BMB 8.1 GRB2_HUMAN
46 PsiBlast_CBE 59.85100%-132 - C3 -1TZE 7.8 GRB2_HUMAN
2 PsiBlast_PDB 59.83100%-138 - C3 -1BM2 8.0 GRB2_HUMAN
10 PsiBlast_PDB 59.80100%-130 - C3 -3KFJ 7.1 GRB2_HUMAN
41 PsiBlast_CBE 59.78100%-139 - C3 -3MXY 6.8 GRB2_HUMAN
47 PsiBlast_CBE 59.70100%-136 - C3 -1ZFP 8.2 GRB2_HUMAN
6 PsiBlast_PDB 59.67100%-132 - C3 -3IMD 7.1 GRB2_HUMAN
44 PsiBlast_CBE 59.32100%-135 - C3 -3N7Y 7.2 GRB2_HUMAN
32 PsiBlast_CBE 59.30100%-138 - C3 -2HUW 8.5 GRB2_HUMAN
43 PsiBlast_CBE 59.28100%-134 - C3 -3N7Y 7.8 GRB2_HUMAN
42 PsiBlast_CBE 58.43100%-134 - C3 -3MXC 7.6 GRB2_HUMAN
34 PsiBlast_CBE 58.30100%-118 - C3 -1QG1 5.6 GRB2_HUMAN
45 PsiBlast_CBE 57.74100%-136 - C3 -3N7Y 6.1 GRB2_HUMAN
60 PsiBlast_CBE 57.6397%-134 - C3 -3WA4 8.0 ?
57 PsiBlast_CBE 57.35100%-134 - C3 -1CJ1 7.9 GRB2_HUMAN
50 PsiBlast_CBE 57.30100%-134 - C3 -1CJ1 8.0 GRB2_HUMAN
58 PsiBlast_CBE 56.90100%-133 - C3 -1CJ1 7.8 GRB2_HUMAN
49 PsiBlast_CBE 56.89100%-134 - C3 -1CJ1 7.9 GRB2_HUMAN
55 PsiBlast_CBE 56.86100%-134 - C3 -1CJ1 7.8 GRB2_HUMAN
52 PsiBlast_CBE 56.86100%-133 - C3 -1CJ1 8.0 GRB2_HUMAN
54 PsiBlast_CBE 56.61100%-133 - C3 -1CJ1 7.9 GRB2_HUMAN
56 PsiBlast_CBE 56.58100%-133 - C3 -1CJ1 8.0 GRB2_HUMAN
59 PsiBlast_CBE 56.50100%-133 - C3 -1CJ1 7.8 GRB2_HUMAN
51 PsiBlast_CBE 56.45100%-134 - C3 -1CJ1 7.7 GRB2_HUMAN
53 PsiBlast_CBE 56.42100%-134 - C3 -1CJ1 7.7 GRB2_HUMAN
36 PsiBlast_CBE 50.86100%-119 - C3 -2AOB 10.0 GRB2_HUMAN
23 PsiBlast_CBE 49.97100%-120 - C3 -1FYR 7.3 GRB2_HUMAN
38 PsiBlast_CBE 49.62100%-120 - C3 -2AOB 10.3 GRB2_HUMAN
22 PsiBlast_CBE 49.26100%-111 - C3 -1FYR 7.2 GRB2_HUMAN
3 PsiBlast_PDB 49.09100%-115 - C3 -1FYR 8.2 GRB2_HUMAN
17 PsiBlast_PDB 48.89100%-113 - C3 -2H46 2.2 GRB2_HUMAN
18 PsiBlast_PDB 48.58100%-110 - C3 -2H5K 7.2 GRB2_HUMAN
84 HHSearch 48.5552%-115 - C3 -1R1P 8.0 GRAP2_MOUSE
40 PsiBlast_CBE 48.22100%-117 - C3 -2AOA 9.3 GRB2_HUMAN
21 PsiBlast_CBE 46.43100%-105 - C3 -1FYR 7.4 GRB2_HUMAN
37 PsiBlast_CBE 45.56100%-115 - C3 -2AOB 10.0 GRB2_HUMAN
35 PsiBlast_CBE 44.65100%-108 - C3 -2AOB 10.4 GRB2_HUMAN
39 PsiBlast_CBE 38.61100%-108 - C3 -2AOA 7.3 GRB2_HUMAN