@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00069_CDK1_Y: (2014-08-15 )
MSGELANYKRLEKVGEGTYGVVYKALDLRPGQGQRVVALKKIRLESEDEGVPSTAIREISLLKELKDDNIVRLYDIVHSDAHKLYLVFEFLDLDLKRYMEGIPKDQPLGADIVKKFMMQLCKGIAYCHSHRILHRDLKPQNLLINKDGNLKLGDFGLARAFGVPLRAYTHEIVTLWYRAPEVLLGGKQYSTGVDTWSIGCIFAEMCNRKPIFSGDSEIDQIFKIFRVLGTPNEAIWPDIVYLPDFKPSFPQWRRKDLSQVVPSLDPRGIDLLDKLLAYDPINRISARRAAIHPYFQES

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(4IC7)
MK07_HUMAN
[Raw transfer]




ANP_C_3(1J1B)
GSK3B_HUMAN
[Raw transfer]




ATP_A_5(4EOM)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(3NIZ)
?
[Raw transfer]




ATP_E_5(1UA2)
CDK7_HUMAN
[Raw transfer]




ATP_A_5(4EOJ)
CDK2_HUMAN
[Raw transfer]




ADP_A_4(2B9H)
FUS3_YEAST
[Raw transfer]




ADP_A_9(3QHW)
CDK2_HUMAN
[Raw transfer]




38R_A_3(4BGQ)
CDKL5_HUMAN
[Raw transfer]




EZR_A_2(3EZR)
CDK2_HUMAN
[Raw transfer]




EZV_A_2(3EZV)
CDK2_HUMAN
[Raw transfer]




4SP_A_5(4EOK)
CDK2_HUMAN
[Raw transfer]




4SP_A_5(1H1S)
CDK2_HUMAN
[Raw transfer]




ADP_A_9(3QHR)
CDK2_HUMAN
[Raw transfer]




6CP_A_5(1H1R)
CDK2_HUMAN
[Raw transfer]




1RO_A_5(4EOL)
CDK2_HUMAN
[Raw transfer]




2A6_A_5(1H1Q)
CDK2_HUMAN
[Raw transfer]




1RO_A_5(4EON)
CDK2_HUMAN
[Raw transfer]




1RO_A_5(4EOS)
CDK2_HUMAN
[Raw transfer]




GOL_A_3(3N9X)
?
[Raw transfer]




CMG_A_5(1H1P)
CDK2_HUMAN
[Raw transfer]




Z3R_A_6(4AU8)
CDK5_HUMAN
[Raw transfer]




0SR_A_3(4F6U)
CDK8_HUMAN
[Raw transfer]




1CK_A_2(4EK4)
CDK2_HUMAN
[Raw transfer]




BOG_X_3(2FST)
MK14_HUMAN
[Raw transfer]




MGF_A_12(3QHR)
CDK2_HUMAN
[Raw transfer]




MGF_A_12(3QHW)
CDK2_HUMAN
[Raw transfer]




CHAIN_J_5(3QHW)
CDK2_HUMAN
[Raw transfer]

-

CHAIN_K_6(3QHR)
CDK2_HUMAN
[Raw transfer]

-

7 PsiBlast_PDB 93.8661%-120 - C1 -4EOJ 4.2 CDK2_HUMAN
11 PsiBlast_PDB 93.6761%-122 - C1 -1H1P 5.3 CDK2_HUMAN
9 PsiBlast_PDB 93.1861%-120 - C1 -3QHW 5.9 CDK2_HUMAN
6 PsiBlast_PDB 93.0961%-124 - C1 -4EOM 4.5 CDK2_HUMAN
4 PsiBlast_PDB 93.0261%-121 - C1 -4EOK 6.0 CDK2_HUMAN
5 PsiBlast_PDB 92.9961%-119 - C1 -4EOL 6.0 CDK2_HUMAN
8 PsiBlast_PDB 92.9461%-119 - C1 -3QHR 6.0 CDK2_HUMAN
3 PsiBlast_PDB 92.8761%-120 - C1 -4EON 6.4 CDK2_HUMAN
10 PsiBlast_PDB 92.8061%-121 - C1 -4EOS 5.3 CDK2_HUMAN
13 PsiBlast_PDB 92.4061%-120 - C1 -1H1R 6.8 CDK2_HUMAN
14 PsiBlast_PDB 91.6161%-119 - C1 -1H1S 6.5 CDK2_HUMAN
47 HHSearch 90.6860%-116 - C1 -3NIZ 5.0 ?
12 PsiBlast_PDB 90.3561%-121 - C1 -1H1Q 5.8 CDK2_HUMAN
1 PsiBlast_PDB 89.6562%-124 - C1 -3EZR 6.2 CDK2_HUMAN
2 PsiBlast_PDB 88.0262%-123 - C1 -3EZV 6.3 CDK2_HUMAN
40 HHSearch 86.1557%-114 - C1 -4AU8 4.5 CDK5_HUMAN
41 HHSearch 75.4936%-111 - C1 -4IC7 5.0 MK07_HUMAN
54 HHSearch 74.7838%-119 - C1 -1J1B 4.5 GSK3B_HUMAN
52 HHSearch 73.5337%-109 - C1 -2B9H 5.2 FUS3_YEAST
37 HHSearch 73.5040%-102 - C1 -3N9X 2.3 ?
48 HHSearch 69.7437%-113 - C1 -2FST 3.3 MK14_HUMAN
33 HHSearch 68.9643%-104 - C1 -1UA2 5.3 CDK7_HUMAN
49 HHSearch 67.3441%-113 - C1 -4F6U 9.1 CDK8_HUMAN
51 HHSearch 67.0839%-115 - C1 -4BGQ 7.7 CDKL5_HUMAN
31 HHSearch 45.8463% 13 - C1 -4EK4 3.6 CDK2_HUMAN