@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PF00156_HPRT_H: (2014-08-29 )
MATRSPGVVISDDEPGYDLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTVDFIRLKSYCNDQSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKRTPRSVGYKPDFVGFEIPDKFVVGYALDYNEYFRDLNHVCVISETGKAKYKA

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

24H_A_3(3GEP)
HPRT_HUMAN
[Raw transfer]




IMU_D_19(1BZY)
HPRT_HUMAN
[Raw transfer]




IMU_A_13(1BZY)
HPRT_HUMAN
[Raw transfer]




IMU_C_17(1BZY)
HPRT_HUMAN
[Raw transfer]




5GP_E_5(1HMP)
HPRT_HUMAN
[Raw transfer]




SV2_C_13(4IJQ)
HPRT_HUMAN
[Raw transfer]




IMU_B_15(1BZY)
HPRT_HUMAN
[Raw transfer]




25H_A_3(3GGJ)
HPRT_HUMAN
[Raw transfer]




SV2_B_9(4IJQ)
HPRT_HUMAN
[Raw transfer]




SV2_D_18(4IJQ)
HPRT_HUMAN
[Raw transfer]




24H_B_4(3GEP)
HPRT_HUMAN
[Raw transfer]




SV2_A_5(4IJQ)
HPRT_HUMAN
[Raw transfer]




SSI_A_5(3OZG)
HGXR_PLAFG
[Raw transfer]




H26_A_4(3GGC)
HPRT_HUMAN
[Raw transfer]




H26_B_3(3GGC)
HPRT_HUMAN
[Raw transfer]




PRP_A_7(1FSG)
HGXR_TOXGO
[Raw transfer]




PRP_B_8(1D6N)
HPRT_HUMAN
[Raw transfer]




PRP_A_6(1D6N)
HPRT_HUMAN
[Raw transfer]




GOL_A_5(3O7M)
?
[Raw transfer]




PPO_A_5(1D6N)
HPRT_HUMAN
[Raw transfer]




9DG_A_8(1FSG)
HGXR_TOXGO
[Raw transfer]




5GP_B_6(2VFA)
HGXR_PLAFG
[Raw transfer]




HPA_A_5(3OZF)
HGXR_PLAFG
[Raw transfer]




5GP_A_5(2VFA)
HGXR_PLAFG
[Raw transfer]




MES_E_5(1TC1)
?
[Raw transfer]




MES_A_5(3HVU)
?
[Raw transfer]




PPO_B_7(1D6N)
HPRT_HUMAN
[Raw transfer]




POP_C_18(1BZY)
HPRT_HUMAN
[Raw transfer]




IMP_A_9(1YFZ)
?
[Raw transfer]




FMB_C_3(1TC1)
?
[Raw transfer]




POP_D_20(1BZY)
HPRT_HUMAN
[Raw transfer]




POP_B_16(1BZY)
HPRT_HUMAN
[Raw transfer]




POP_A_14(1BZY)
HPRT_HUMAN
[Raw transfer]




POP_A_6(3OZG)
HGXR_PLAFG
[Raw transfer]




POP_A_6(3OZF)
HGXR_PLAFG
[Raw transfer]




19 PsiBlast_CBE 97.37100%-163 - C2 -4IJQ 6.0 HPRT_HUMAN
18 PsiBlast_CBE 96.82100%-162 - C2 -4IJQ 5.4 HPRT_HUMAN
17 PsiBlast_CBE 96.82100%-161 - C2 -4IJQ 5.8 HPRT_HUMAN
4 PsiBlast_PDB 96.47100%-165 - C2 -3GEP 7.4 HPRT_HUMAN
6 PsiBlast_PDB 96.29100%-158 - C2 -3GGJ 6.2 HPRT_HUMAN
13 PsiBlast_CBE 96.18100%-160 - C2 -3GEP 6.0 HPRT_HUMAN
7 PsiBlast_PDB 95.80100%-159 - C2 -4IJQ 5.3 HPRT_HUMAN
5 PsiBlast_PDB 95.60100%-162 - C2 -3GGC 6.1 HPRT_HUMAN
1 PsiBlast_PDB 95.60100%-155 - C2 -1HMP 6.1 HPRT_HUMAN
12 PsiBlast_CBE 95.42100%-157 - C2 -3GGC 5.7 HPRT_HUMAN
14 PsiBlast_CBE 94.72100%-147 - C2 -1BZY 7.5 HPRT_HUMAN
2 PsiBlast_PDB 94.32100%-145 - C2 -1BZY 7.5 HPRT_HUMAN
16 PsiBlast_CBE 94.24100%-141 - C2 -1BZY 7.3 HPRT_HUMAN
15 PsiBlast_CBE 94.00100%-146 - C2 -1BZY 6.8 HPRT_HUMAN
8 PsiBlast_PDB 92.3999%-157 - C2 -1D6N 5.0 HPRT_HUMAN
20 PsiBlast_CBE 88.8799%-147 - C2 -1D6N 4.1 HPRT_HUMAN
21 PsiBlast_CBE 85.8480%-165 - C2 -2VFA 4.3 HGXR_PLAFG (first)
9 PsiBlast_PDB 81.5780%-155 - C2 -2VFA 3.9 HGXR_PLAFG (first)
11 PsiBlast_PDB 77.8849%-140 - C2 -3OZG 6.5 HGXR_PLAFG
10 PsiBlast_PDB 77.3449%-139 - C2 -3OZF 3.8 HGXR_PLAFG
35 HHSearch 73.0840%-126 - C2 -1FSG 7.1 HGXR_TOXGO
42 HHSearch 59.5336%-149 - C2 -1YFZ 5.2 ?
40 HHSearch 58.8538%-143 - C2 -3HVU 2.2 ?
36 HHSearch 58.7932%-159 - C2 -1TC1 3.2 ?
38 HHSearch 55.7835%-162 - C2 -3O7M 2.1 ?