@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Wbm0357: (2015-11-30 )
MVRRITLNSNFMFGASDIKSLPNESAPEIAFAGRSNVGKSSLINLLINSKKAARVSSKPGCTRQINFYSMYNDKFRLVDLPGYGCSHASKDETIQYLGLVEYYLIHRRNLRRVFVLIDSKVRLKEIDKDFIYWLTYNNINFDVVLTKIDKVDRENLDAIIESTRKWINNESVSIRQISVRVKYEMTKVRDEFFKFTR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GDP_A_3(3PQC)
ENGB_THEMA
[Raw transfer]



GDP_B_2(1SVI)
ENGB_BACSU
[Raw transfer]
64 HHSearch 92.7136%-120 - C1 -1PUI - ENGB_ECOLI -
66 HHSearch 92.6539%-103 - C1 -3PQC 7.2 ENGB_THEMA
54 Fugue 92.3935%-120 * C1 *1PUI - ENGB_ECOLI -
3 PsiBlast_PDB 87.9945%-138 - C1 -3PR1 - ENGB_THEMA -
22 PsiBlast_CBE 85.2145%-116 - C1 -3PQC - ENGB_THEMA -
65 HHSearch 85.1636%-110 - C1 -1SVI 6.9 ENGB_BACSU
2 PsiBlast_PDB 83.5645%-112 - C1 -3PQC - ENGB_THEMA -
4 PsiBlast_PDB 81.9139%-122 - C1 -1SUL - ENGB_BACSU -
7 PsiBlast_PDB 81.5334% -91 - C1 -4DHE - ENGB_BURTA -
5 PsiBlast_PDB 81.4239%-125 - C1 -1SVI - ENGB_BACSU -
6 PsiBlast_PDB 81.3639%-114 - C1 -1SVW - ENGB_BACSU -
23 PsiBlast_CBE 78.6839%-115 - C1 -1SVW - ENGB_BACSU -
1 PsiBlast_PDB 76.0541%-127 - C1 -1PUI - ENGB_ECOLI -
21 PsiBlast_CBE 75.5241%-130 - C1 -1PUI - ENGB_ECOLI -
9 PsiBlast_PDB 72.4226% -80 - C1 -2E87 - ? -
67 HHSearch 70.0923%-100 - C1 -3IEV - ERA_AQUAE -
80 HHSearch 67.6021%-109 - C1 -1MKY - DER_THEMA -
74 HHSearch 67.2422% -98 - C1 -3B1V - ? -
20 PsiBlast_PDB 65.7629%-104 - C1 -4DCS - DER_BACSU -
71 HHSearch 65.2421%-101 - C1 -2WJG - FEOB_METJA -