@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA0998: (2016-03-21 )
MKEIVIASNNQGKINDFKVIFPDYHVIGISELIPDFDVEETGSTFEENAILKSEAAAKALNKTVIADDSGLEVFALNGEPGIYSARYAGENKSDEANIEKLLNKLGNTTDRRAQFVCVISMSGPDMETKVFKGTVSGEIADGKYGENGFGYDPIFYVPKLDKTMAQLSKEQKGQISHRRNAINLLQAFLEGEKNV

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ITT_A_11(2Q16)
RDGB_ECOLI
[Raw transfer]



GOL_B_19(2DVN)
NTPA_PYRHO
[Raw transfer]



IMP_B_7(3S86)
NTPA_THEMA
[Raw transfer]



IMP_A_5(3S86)
NTPA_THEMA
[Raw transfer]



IMP_D_11(3S86)
NTPA_THEMA
[Raw transfer]



IMP_C_9(3S86)
NTPA_THEMA
[Raw transfer]



ITT_A_5(2E5X)
NTPA_PYRHO
[Raw transfer]



ITT_A_3(2DVO)
NTPA_PYRHO
[Raw transfer]



IMP_A_16(2DVN)
NTPA_PYRHO
[Raw transfer]



IMP_B_17(2DVN)
NTPA_PYRHO
[Raw transfer]



IMP_A_2(2PYU)
RDGB_ECOLI
[Raw transfer]



GOL_A_18(2DVN)
NTPA_PYRHO
[Raw transfer]
1 PsiBlast_PDB 98.91100% -77 - C3 -4BNQ - NTPA_STAAN -
21 PsiBlast_CBE 95.90100% -40 - C- -4BNQ - NTPA_STAAN -
27 HHSearch 77.9444% -65 * C3 *3TQU - NTPA_COXBU -
2 PsiBlast_PDB 77.7943% -63 - C3 -3TQU - NTPA_COXBU -
30 HHSearch 75.5028% -77 - C3 -2CAR - ITPA_HUMAN -
3 PsiBlast_PDB 75.3743% -63 - C3 -2PYU 5.1 RDGB_ECOLI
5 PsiBlast_PDB 74.9343% -54 - C3 -2Q16 8.1 RDGB_ECOLI
29 HHSearch 74.8535% -57 - C3 -1VP2 - NTPA_THEMA -
19 PsiBlast_PDB 74.2527% -65 - C3 -2I5D - ITPA_HUMAN -
4 PsiBlast_PDB 74.0343% -60 - C3 -1K7K - RDGB_ECOLI -
17 PsiBlast_PDB 73.7327% -64 - C3 -2CAR - ITPA_HUMAN -
40 Fugue 73.3932% -85 - C3 -1B78 - NTPA_METJA -
16 PsiBlast_PDB 72.1727% -71 - C3 -4F95 - ITPA_HUMAN -
25 PsiBlast_CBE 71.6235% -54 - C3 -1VP2 - NTPA_THEMA -
6 PsiBlast_PDB 71.3435% -56 - C3 -1VP2 - NTPA_THEMA -
18 PsiBlast_PDB 71.1227% -57 - C3 -2J4E - ITPA_HUMAN -
22 PsiBlast_CBE 70.7535% -48 - C3 -3S86 6.4 NTPA_THEMA
24 PsiBlast_CBE 70.3435% -54 - C3 -3S86 6.3 NTPA_THEMA
31 HHSearch 70.0927% -63 - C3 -1V7R - NTPA_PYRHO -
7 PsiBlast_PDB 70.0735% -55 - C3 -3S86 6.4 NTPA_THEMA
23 PsiBlast_CBE 68.9935% -48 - C3 -3S86 6.4 NTPA_THEMA
12 PsiBlast_PDB 60.1537% -59 - C3 -2DVO 5.6 NTPA_PYRHO
15 PsiBlast_PDB 59.8237% -66 - C3 -2E5X 5.1 NTPA_PYRHO
26 PsiBlast_CBE 59.4937% -63 - C3 -2DVN 5.6 NTPA_PYRHO
11 PsiBlast_PDB 59.2537% -64 - C3 -2DVN 6.0 NTPA_PYRHO