@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Lmo1199: (2016-03-22 )
MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVTYIKLIKELIKDKEVVKTGMRREIDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLEVKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYNPRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDYELVDMTTVVIVGNKETYVKNGKMITPRGYSL

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

SAH_A_2(2ZVC)
?
[Raw transfer]



SAH_C_13(3NUT)
?
[Raw transfer]



SAH_A_2(2ZVB)
?
[Raw transfer]



SAH_A_2(2ZVB)
?
[Raw transfer]



SAH_A_5(3NUT)
?
[Raw transfer]



SAH_B_9(3NUT)
?
[Raw transfer]



SAH_A_5(3NUT)
?
[Raw transfer]



SAH_A_5(3NUT)
?
[Raw transfer]



SAH_D_16(3NUT)
?
[Raw transfer]



GOL_C_15(3NUT)
?
[Raw transfer]
31 HHSearch 94.5646%-134 - C2 -2ZVB 6.3 ?
1 PsiBlast_PDB 93.8342%-136 - C2 -2ZVB 6.3 ?
2 PsiBlast_PDB 93.2642%-139 - C2 -2ZVC 6.1 ?
30 HHSearch 89.5039%-141 - C2 -3NUT 6.6 ?
50 Fugue 88.7638%-139 - C2 -3NUT 6.6 ?
3 PsiBlast_PDB 87.6038%-138 - C2 -3NUT 6.6 ?
23 PsiBlast_CBE 86.3838%-135 - C2 -3NUT 7.0 ?
22 PsiBlast_CBE 85.6138%-137 - C2 -3NUT 7.1 ?
21 PsiBlast_CBE 84.3038%-133 - C2 -3NUT 7.4 ?
55 Fugue 71.0919%-154 - C2 -2QBU - ? -
39 HHSearch 67.9017%-147 - C2 -2QBU - ? -
32 HHSearch 66.6920%-112 - C2 -3NDC - COBM_RHOCB -
33 HHSearch 66.3721%-115 - C2 -2YBO - ? -
42 HHSearch 62.3624%-115 - C2 -1PJQ - CYSG_SALTY -
35 HHSearch 60.2921% -99 - C2 -1S4D - SUMT_PSEDE -
36 HHSearch 59.8922%-102 * C2 *1CBF - CBIF_BACME -
43 HHSearch 59.1422%-133 - C2 -2E0N - ? -
41 HHSearch 58.9019%-124 - C2 -2BB3 - ? -
56 Fugue 58.2419%-118 - C2 -2E0N - ? -
38 HHSearch 57.6220%-109 - C2 -1VE2 - ? -