@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : bsu04000: (2016-06-06 )
MTMKQFEIAAIPGDGVGKEVVAAAEKVLHTAAEVHGGLSFSFTAFPWSCDYYLEHGKMMPEDGIHTLTQFEAVFLGAVGNPKLVPDHISLWGLLLKIRRELELSINMRPAKQMAGITSPLLHPNDFDFVVIRENSEGEYSEVGGRIHRGDDEIAIQNAVFTRKATERVMRFAFELAKKRRSHVTSATKSNGIYHAMPFWDEVFQQTAADYSGIETSSQHIDALAAFFVTRPETFDVIVASNLFGDILTDISSSLMGSIGIAPSANINPSGKYPSMFEPVHGSAPDIAGQGLANPIGQIWTAKLMLDHFGEEELGAKILDVMEQVTADGIKTRDIGGQSTTAEVTDEICSRLRKL

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_X_2(3FMX)
TTUC_PSEPU
[Raw transfer]




NAD_B_3(4XXV)
LEU3_BURTA
[Raw transfer]




NAD_A_4(4WUO)
LEU3_THET8
[Raw transfer]




NAD_B_18(4WUO)
LEU3_THET8
[Raw transfer]




GGG_B_7(3TY3)
LYS12_SCHPO
[Raw transfer]




CIT_A_3(1HQS)
IDH_BACSU
[Raw transfer]




GGG_A_3(3TY3)
LYS12_SCHPO
[Raw transfer]




NAP_C_3(2D1C)
IDH_THET8
[Raw transfer]




GOL_B_4(4XXV)
LEU3_BURTA
[Raw transfer]




GOL_B_12(3TY4)
LYS12_SCHPO
[Raw transfer]




GOL_A_5(3TY4)
LYS12_SCHPO
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




GOL_A_6(3TY4)
LYS12_SCHPO
[Raw transfer]




IPM_B_9(4Y1P)
?
[Raw transfer]




IPM_A_2(3WZY)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL3)
LEU3_SHEON
[Raw transfer]




IPM_A_3(2Y41)
LEU3_THET8
[Raw transfer]




IPM_B_6(1A05)
LEU3_ACIFR
[Raw transfer]




IPM_A_2(3VMJ)
LEU3_SHEON
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




IPM_A_2(3VML)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL6)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VKZ)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3VL2)
LEU3_SHEON
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




IPM_A_2(3VL4)
LEU3_SHEON
[Raw transfer]




2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]




2PE_A_5(2Y3Z)
LEU3_THET8
[Raw transfer]




IPM_A_2(3VL7)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3WZW)
LEU3_SHEON
[Raw transfer]




IPM_A_2(3WZV)
?
[Raw transfer]




IPM_B_5(2Y41)
LEU3_THET8
[Raw transfer]




IPM_B_6(3VMK)
?
[Raw transfer]




IPM_A_2(3WZX)
LEU3_SHEON
[Raw transfer]




IPM_A_5(1A05)
LEU3_ACIFR
[Raw transfer]




NAD_A_2(1HEX)
LEU3_THET8
[Raw transfer]




IPM_A_3(3VMK)
?
[Raw transfer]




NAD_A_2(2ZTW)
LEU3_THET8
[Raw transfer]




2PE_A_4(2Y3Z)
LEU3_THET8
[Raw transfer]




DEI_A_3(2ZTW)
LEU3_THET8
[Raw transfer]




EOH_B_19(4WUO)
LEU3_THET8
[Raw transfer]




112 HHSearch 94.8752% -94 - C6 -3FLK - TTUC_PSEPU -
2 PsiBlast_PDB 92.5450% -92 - C6 -3FLK - TTUC_PSEPU -
1 PsiBlast_PDB 88.4050% -89 - C6 -3FMX 6.6 TTUC_PSEPU
97 PsiBlast_CBE 86.1633%-101 - C6 -3UDU - LEU3_CAMJE -
100 PsiBlast_CBE 85.8633%-100 - C6 -3UDU - LEU3_CAMJE -
98 PsiBlast_CBE 85.5533%-101 - C6 -3UDU - LEU3_CAMJE -
99 PsiBlast_CBE 85.4433%-102 - C6 -3UDU - LEU3_CAMJE -
68 PsiBlast_CBE 85.0237%-108 - C6 -3VMK 3.1 ?
122 HHSearch 83.9635% -99 - C6 -3VMK 1.8 ?
69 PsiBlast_CBE 83.6437%-106 - C6 -3VMK 3.4 ?
5 PsiBlast_PDB 83.6137% -89 - C6 -1VLC - LEU3_THEMA -
115 HHSearch 83.5334% -99 - C6 -3UDU - LEU3_CAMJE -
49 PsiBlast_CBE 83.2336% -96 - C6 -4WUO 6.4 LEU3_THET8
74 PsiBlast_CBE 83.0634% -98 - C6 -1CNZ - LEU3_SALTY -
119 HHSearch 82.8639% -90 - C6 -1VLC - LEU3_THEMA -
129 HHSearch 82.8438% -98 * C6 *3U1H - ? -
17 PsiBlast_PDB 82.7137% -95 - C6 -1G2U - LEU3_THET8 -
101 PsiBlast_CBE 82.2333%-103 - C6 -3UDU - LEU3_CAMJE -
13 PsiBlast_PDB 81.9036% -99 - C6 -3AH3 - HICDH_THET2 -
48 PsiBlast_CBE 81.5036% -93 - C6 -4WUO 4.2 LEU3_THET8
64 PsiBlast_CBE 81.4338%-106 - C6 -3VKZ 2.9 LEU3_SHEON
76 PsiBlast_CBE 81.4032% -99 - C6 -3TY4 3.5 LYS12_SCHPO
66 PsiBlast_CBE 81.1738%-105 - C6 -3WZX 4.2 LEU3_SHEON
77 PsiBlast_CBE 81.0632% -97 - C6 -3TY4 2.9 LYS12_SCHPO
117 HHSearch 80.9034% -92 - C6 -3TY4 2.9 LYS12_SCHPO
79 PsiBlast_CBE 80.6332% -96 - C6 -3TY3 3.5 LYS12_SCHPO
56 PsiBlast_CBE 80.5738%-103 - C6 -3WZW 3.0 LEU3_SHEON
57 PsiBlast_CBE 80.4838%-105 - C6 -3WZV 4.2 ?
59 PsiBlast_CBE 80.4538%-105 - C6 -3VL7 3.8 LEU3_SHEON
85 PsiBlast_CBE 80.4432% -93 - C6 -4XXV 7.4 LEU3_BURTA
65 PsiBlast_CBE 80.1938%-104 - C6 -3WZY 3.8 LEU3_SHEON
63 PsiBlast_CBE 80.1938%-106 - C6 -3VL2 3.2 LEU3_SHEON
47 PsiBlast_CBE 79.8337% -91 - C6 -1HEX 6.6 LEU3_THET8
123 HHSearch 79.8032% -99 - C6 -1A05 3.8 LEU3_ACIFR
114 HHSearch 79.6338% -90 - C6 -2Y3Z 2.8 LEU3_THET8
58 PsiBlast_CBE 79.5438%-105 - C6 -3VMJ 3.7 LEU3_SHEON
44 PsiBlast_CBE 79.5137% -91 - C6 -2Y41 2.2 LEU3_THET8
19 PsiBlast_PDB 79.4637% -93 - C6 -2Y3Z 3.5 LEU3_THET8
60 PsiBlast_CBE 79.3238%-101 - C6 -3VL6 4.0 LEU3_SHEON
67 PsiBlast_CBE 79.1839%-105 - C6 -3VML 3.7 LEU3_SHEON
46 PsiBlast_CBE 79.1837% -91 - C6 -2ZTW 4.6 LEU3_THET8
62 PsiBlast_CBE 79.0338%-104 - C6 -3VL3 3.0 LEU3_SHEON
78 PsiBlast_CBE 78.6232% -96 - C6 -3TY3 2.2 LYS12_SCHPO
43 PsiBlast_CBE 78.2937% -87 - C6 -2Y41 4.3 LEU3_THET8
61 PsiBlast_CBE 77.6838%-100 - C6 -3VL4 3.0 LEU3_SHEON
82 PsiBlast_CBE 76.7332% -87 - C6 -4Y1P 4.0 ?
83 PsiBlast_CBE 74.2333% -99 - C6 -1A05 4.2 LEU3_ACIFR
84 PsiBlast_CBE 73.4233% -97 - C6 -1A05 3.8 LEU3_ACIFR
118 HHSearch 72.5633% -83 - C6 -2D1C 5.1 IDH_THET8