@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2525c: (2016-05-11 )
MSVSRRDVLKFAAATPGVLGLGVVASSLRAAPASAGSLGTLLDYAAGVIPASQIRAAGAVGAIRYVSDRRPGGAWMLGKPIQLSEARDLSGNGLKIVSCYQYGKGSTADWLGGASAGVQHARRGSELHAAAGGPTSAPIYASIDDNPSYEQYKNQIVPYLRSWESVIGHQRTGVYANSKTIDWAVNDGLGSYFWQHNWGSPKGYTHPAAHLHQVEIDKRKVGGVGVDVNQILKPQFGQWA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPE_A_2(4PMR)
LYS25_MYCTU
[Raw transfer]



GOL_A_3(4PMO)
LYS25_MYCTU
[Raw transfer]



GOL_A_3(4PMO)
LYS25_MYCTU
[Raw transfer]



GOL_A_3(4PMO)
LYS25_MYCTU
[Raw transfer]



GOL_B_17(4PMO)
LYS25_MYCTU
[Raw transfer]



TLA_A_2(4PMQ)
LYS25_MYCTU
[Raw transfer]



MES_B_5(4PMN)
LYS25_MYCTU
[Raw transfer]



MES_A_3(4PMN)
LYS25_MYCTU
[Raw transfer]
36 Fugue 97.7597% -79 - C4 -4PMO 2.5 LYS25_MYCTU
8 HHSearch 97.6598% -79 - C4 -4PMO 2.5 LYS25_MYCTU
1 PsiBlast_PDB 97.55100% -81 - C4 -4PMO 2.5 LYS25_MYCTU
3 PsiBlast_PDB 96.73100% -85 - C4 -4PMR 2.7 LYS25_MYCTU
6 PsiBlast_CBE 96.12100% -81 - C4 -4PMO 3.8 LYS25_MYCTU
2 PsiBlast_PDB 96.04100% -85 - C4 -4PMQ 3.9 LYS25_MYCTU
7 PsiBlast_CBE 80.8799% -30 - C4 -4PMN 3.2 LYS25_MYCTU
4 PsiBlast_PDB 79.9299% -29 - C4 -4PMN 2.2 LYS25_MYCTU
38 Fugue 58.8618% -38 - C4 -4FF5 - ? -
17 HHSearch 58.0417% -56 - C4 -5A6S - ? -
9 HHSearch 57.6018% -59 - C4 -1SFS - ? -
10 HHSearch 57.1818% -53 - C4 -1JFX - LYSM1_STRGL -
11 HHSearch 56.4914% -64 - C4 -2WW5 - ? -
14 HHSearch 55.9313% -56 - C4 -4KRT - ? -
19 HHSearch 55.4912% -59 - C4 -2WAG - ? -
45 Fugue 55.1615% -53 * C4 *1JFX - LYSM1_STRGL -
12 HHSearch 54.1213% -54 - C4 -4KRU - ? -
18 HHSearch 52.7816% -43 - C4 -4FF5 - ? -
41 Fugue 52.2113% -41 - C4 -2NW0 - ? -
15 HHSearch 49.5913% -48 - C4 -3HMC - ? -