@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA1393: (2016-01-29 )
MNPREHGKRSIDNETRSALKRQRPAVIWLTGLSGAGKSTIASALELALFEQKKHTFLLDGDDLRLGLCRNLGYSDEDRTENIRRIAEVAKILLEAGLIVIVATISPFSRDRRLSRELIGIEHFIEVFVDTPLSECERRDPKGLYRKARSGKIENFTGIDSIYETPAQPNITIDTLSEDPDLAVKRIISYLETNQPA

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_16(4BZX)

[Raw transfer]




PPS_B_10(2OFX)
PAPS1_HUMAN
[Raw transfer]




ANP_A_4(4BZX)
CYSNC_MYCTU
[Raw transfer]




ANP_C_11(3UIE)
APK1_ARATH
[Raw transfer]




PPS_A_9(2OFX)
PAPS1_HUMAN
[Raw transfer]




ANP_B_8(3UIE)
APK1_ARATH
[Raw transfer]




ANP_F_26(5CB6)
?
[Raw transfer]




ANP_D_19(5CB6)
?
[Raw transfer]




ANP_A_5(3UIE)
APK1_ARATH
[Raw transfer]




ADP_B_8(4BZQ)

[Raw transfer]




ANP_A_5(3UIE)
APK1_ARATH
[Raw transfer]




ADP_E_5(2AX4)
PAPS2_HUMAN
[Raw transfer]




ANP_E_23(5CB6)
?
[Raw transfer]




ADP_A_3(4BZP)
?
[Raw transfer]




ANP_C_15(5CB6)
?
[Raw transfer]




ANP_A_8(5CB6)
?
[Raw transfer]




ANP_B_12(5CB6)
?
[Raw transfer]




ADX_A_3(2PEY)
PAPS1_HUMAN
[Raw transfer]




ADX_A_3(4BZQ)
CYSNC_MYCTU
[Raw transfer]




DAT_B_5(2PEZ)
PAPS1_HUMAN
[Raw transfer]




ADX_C_8(4FXP)
APK1_ARATH
[Raw transfer]




ADX_B_7(4BZQ)

[Raw transfer]




ADP_C_3(2GKS)
SATC_AQUAE
[Raw transfer]




DAT_A_4(2PEZ)
PAPS1_HUMAN
[Raw transfer]




ADP_C_3(2GKS)
SATC_AQUAE
[Raw transfer]




ADX_R_18(1M7G)
KAPS_PENCH
[Raw transfer]




GGZ_A_3(2PEZ)
PAPS1_HUMAN
[Raw transfer]




ADX_A_3(4BZX)
CYSNC_MYCTU
[Raw transfer]




ADP_B_8(4BZP)
?
[Raw transfer]




GGZ_A_3(2PEZ)
PAPS1_HUMAN
[Raw transfer]




ADP_G_7(2AX4)
PAPS2_HUMAN
[Raw transfer]




ADP_B_5(1X6V)
PAPS1_HUMAN
[Raw transfer]




ADP_B_4(1XJQ)
PAPS1_HUMAN
[Raw transfer]




ADP_B_5(1X6V)
PAPS1_HUMAN
[Raw transfer]




ADP_F_6(2GKS)
SATC_AQUAE
[Raw transfer]




ADP_B_4(1XNJ)
PAPS1_HUMAN
[Raw transfer]




ADX_B_7(5CB8)
?
[Raw transfer]




ADX_A_4(4FXP)
APK1_ARATH
[Raw transfer]




ADX_L_12(1M7G)
KAPS_PENCH
[Raw transfer]




ADX_P_16(1M7G)
KAPS_PENCH
[Raw transfer]




ADX_A_3(5CB8)
?
[Raw transfer]




ADX_L_12(1M7G)
KAPS_PENCH
[Raw transfer]




ADX_B_6(4FXP)
APK1_ARATH
[Raw transfer]




TLA_C_3(1D6J)
KAPS_PENCH
[Raw transfer]




TLA_C_3(1D6J)
KAPS_PENCH
[Raw transfer]




27 PsiBlast_CBE 94.8250%-115 - C4 -2OFW - PAPS1_HUMAN -
118 HHSearch 93.5949%-106 * C4 *2PEZ 7.1 PAPS1_HUMAN
6 PsiBlast_PDB 93.0549%-111 - C4 -2PEZ 8.0 PAPS1_HUMAN
30 PsiBlast_CBE 92.7750%-114 - C4 -2OFW - PAPS1_HUMAN -
26 PsiBlast_CBE 92.7450%-112 - C4 -2OFW - PAPS1_HUMAN -
44 PsiBlast_CBE 92.5747%-115 - C4 -4BZQ 7.9
28 PsiBlast_CBE 92.5450%-108 - C4 -2OFW - PAPS1_HUMAN -
31 PsiBlast_CBE 92.4950%-109 - C4 -2OFW - PAPS1_HUMAN -
42 PsiBlast_CBE 92.4647%-118 - C4 -4BZP 6.6 ?
32 PsiBlast_CBE 92.4450%-107 - C4 -2OFW - PAPS1_HUMAN -
117 HHSearch 92.3846% -94 - C4 -1M7G 7.2 KAPS_PENCH
29 PsiBlast_CBE 92.3650%-117 - C4 -2OFW - PAPS1_HUMAN -
3 PsiBlast_PDB 92.3449%-104 - C4 -2OFX 7.4 PAPS1_HUMAN
43 PsiBlast_CBE 92.0647%-121 - C4 -4BZX 8.5
37 PsiBlast_CBE 91.9747%-112 - C4 -1M7G 7.0 KAPS_PENCH
25 PsiBlast_CBE 91.8749%-111 - C4 -2OFX 7.9 PAPS1_HUMAN
122 HHSearch 91.8546% -91 - C4 -3UIE 7.4 APK1_ARATH
36 PsiBlast_CBE 91.8547%-111 - C4 -1M7G 7.1 KAPS_PENCH
15 PsiBlast_PDB 91.7947%-116 - C4 -4BZQ 7.7 CYSNC_MYCTU
16 PsiBlast_PDB 91.7847%-119 - C4 -4BZX 8.4 CYSNC_MYCTU
14 PsiBlast_PDB 91.7147%-119 - C4 -4BZP 7.6 ?
23 PsiBlast_CBE 91.6847% -93 - C4 -3UIE 7.0 APK1_ARATH
10 PsiBlast_PDB 91.6749%-120 - C4 -1X6V 7.7 PAPS1_HUMAN
119 HHSearch 91.6245%-106 - C4 -1X6V 7.9 PAPS1_HUMAN
24 PsiBlast_CBE 91.4147% -95 - C4 -3UIE 7.4 APK1_ARATH
8 PsiBlast_PDB 91.2947%-106 - C4 -1M7G 7.2 KAPS_PENCH
22 PsiBlast_CBE 91.1047% -94 - C4 -4FXP 7.5 APK1_ARATH
1 PsiBlast_PDB 90.9747% -93 - C4 -3UIE 7.4 APK1_ARATH
5 PsiBlast_PDB 90.9349%-109 - C4 -2PEY 6.7 PAPS1_HUMAN
11 PsiBlast_PDB 90.7349%-116 - C4 -1XJQ 7.8 PAPS1_HUMAN
2 PsiBlast_PDB 90.6647% -95 - C4 -4FXP 8.5 APK1_ARATH
40 PsiBlast_CBE 90.5550%-112 - C4 -2AX4 7.9 PAPS2_HUMAN
13 PsiBlast_PDB 90.4350%-111 - C4 -2AX4 7.2 PAPS2_HUMAN
33 PsiBlast_CBE 89.6249%-125 - C4 -2PEZ 7.7 PAPS1_HUMAN
12 PsiBlast_PDB 89.2149%-109 - C4 -1XNJ 8.7 PAPS1_HUMAN
49 PsiBlast_CBE 89.1848%-109 - C4 -5CB6 5.9 ?
21 PsiBlast_CBE 89.0947% -95 - C4 -4FXP 7.3 APK1_ARATH
50 PsiBlast_CBE 89.0248%-109 - C4 -5CB6 7.5 ?
121 HHSearch 88.9342%-104 - C4 -2GKS 7.2 SATC_AQUAE
47 PsiBlast_CBE 88.8648%-110 - C4 -5CB6 7.2 ?
46 PsiBlast_CBE 88.7548%-110 - C4 -5CB6 6.5 ?
19 PsiBlast_PDB 88.5848%-106 - C4 -5CB8 8.4 ?
48 PsiBlast_CBE 88.5348%-103 - C4 -5CB6 7.0 ?
45 PsiBlast_CBE 88.4448%-105 - C4 -5CB8 7.0 ?
7 PsiBlast_PDB 88.1847%-119 - C4 -1D6J 3.6 KAPS_PENCH
20 PsiBlast_PDB 88.0643%-106 - C4 -2GKS 7.2 SATC_AQUAE
18 PsiBlast_PDB 88.0248%-108 - C4 -5CB6 7.0 ?
51 PsiBlast_CBE 83.9043% -89 - C4 -2GKS 6.6 SATC_AQUAE
138 Fugue 75.7638% -70 - C4 -1D6J 3.6 KAPS_PENCH