@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo1834: (2016-03-29 )
VLQTEMKVIQQTEIADKVYELILTGECVAGMSPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRVEGDGTRDFSKLSEGDTIDVLGPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEKGVQVMFVNGFQSAKDSFYAQEMAEYGTVHIATVDGSLGTQGFVTDITKNFPEEPDVIYSCGPKAMLQAVKASFPETKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------------------------------------------------------.........10...-----...--------------..20...---...---.---.30-.-.......40-...--.-----------------------------.-----------....50........60---.........70-.-----------------.--.--.-.-....-80....-...-..90......-------...100-------.......110.......120.......130-----.-----..--......140.......150----....------------..--.--160.--..----------.------.------.----...170.--..--..-----.-------.180---.-----...-..-...190......--..200-..-..-.---...210-------------------------------------------........220.......230.......-240.......250..---------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------------------------------------------------------VLQTEMKVIQQTEI-----ADK--------------VYELILT---GEC---V---AGM-S-PGQFLMLK--PSR--S-----------------------------D-----------LLMRRPISICSYDKT----AKTCILLYRV--E-----------------G--D--G-T-RDFS-K-LSEG-DTI-DVL-GPLGKG-------FDIDTT-------PAPKTALLIGGGIGVPPMYQLGKELAEK-------G-----VQ--VMFVNGFQSAKDSFYAQEM----AEYG------------TV--H--I--A--TV----------D------G------S----LGTQGFV--TD--IT-----K-------NF-----P-----EEP-DV-IYSCG-PKAMLQ--AVK-A-SF-PE-T---KTYLS--------------------------------------------LEERMACGIGACYACVCPKADDTNKQFK-VCEDGPVFRADEVKL---------
1 PsiBlast_PDB 95.9945%-110 - C3 -1EP1 PYRK_LACLM B:[3-261] ------------------------------------------------------------------------------------------------------------------------------------------------------LQEMMTVVSQREV-----AYN--------------IFEMVLK---GTL---V---DEM-DLPGQFLHLA--VPN--G-----------------------------A-----------MLLRRPISISSWDKR----AKTCTILYRIGDE-----------------T--T--G-T-YKLS-K-LESG-AKV-DVM-GPLGNG-------FPVAEV-------TSTDKILIIGGGIGVPPLYELAKQLEKT-------G-----CQ--MTILLGFASENVKILENEF----SNLKNV----------TL--K--I--A--TD----------D------G------S----YGTKGHV--GM--LM-----N-------EI-----D-----FEV-DA-LYTCG-APAMLK--AVA-K-KY-DQLE---RLYIS--------------------------------------------MESRMACGIGACYACVEHDKEDESHALK-VCEDGPVFLGKQLSL---------
29 HHSearch 95.6246%-106 - C3 -1EP3 PYRK_LACLM B:[4-262] ------------------------------------------------------------------------------------------------------------------------------------------------------LQEMMTVVSQREV-----AYN--------------IFEMVLK---GTL---VD--EMD-L-PGQFLHLA--VPN--G-----------------------------A-----------MLLRRPISISSWDKR----AKTCTILYRI--G-----------------DETT--G-T-YKLS-K-LESG-AKV-DVM-GPLGNG-------FPVAEV-------TSTDKILIIGGGIGVPPLYELAKQLEKT-------G-----CQ--MTILLGFASENVKILENEF----SNLKNV----------TL--K--I--A--TD----------D------G------S----YGTKGHV--GM--LM-----N-------EI-----D-----FEV-DA-LYTCG-APAMLK--AVA-K-KY-DQ-LE--RLYIS--------------------------------------------MESRMACGIGACYACVEHDKEDESHALK-VCEDGPVFLGKQLSL---------
2 PsiBlast_PDB 95.1845%-107 - C3 -1EP2 PYRK_LACLM B:[3-261] ------------------------------------------------------------------------------------------------------------------------------------------------------LQEMMTVVSQREV-----AYN--------------IFEMVLK---GTL---V---DEM-DLPGQFLHLA--VPN--G-----------------------------A-----------MLLRRPISISSWDKR----AKTCTILYRIGDE-----------------T--T--G-T-YKLS-K-LESG-AKV-DVM-GPLGNG-------FPVAEV-------TSTDKILIIGGGIGVPPLYELAKQLEKT-------G-----CQ--MTILLGFASENVKILENEF----SNLKNV----------TL--K--I--A--TD----------D------G------S----YGTKGHV--GM--LM-----N-------EI-----D-----FEV-DA-LYTCG-APAMLK--AVA-K-KY-DQLE---RLYIS--------------------------------------------MESRMACGIGACYACVEHDKEDESHALK-VCEDGPVFLGKQLSL---------
3 PsiBlast_PDB 95.1645%-108 - C3 -1EP3 PYRK_LACLM B:[4-262] ------------------------------------------------------------------------------------------------------------------------------------------------------LQEMMTVVSQREV-----AYN--------------IFEMVLK---GTL---V---DEM-DLPGQFLHLA--VPN--G-----------------------------A-----------MLLRRPISISSWDKR----AKTCTILYRIGDE-----------------T--T--G-T-YKLS-K-LESG-AKV-DVM-GPLGNG-------FPVAEV-------TSTDKILIIGGGIGVPPLYELAKQLEKT-------G-----CQ--MTILLGFASENVKILENEF----SNLKNV----------TL--K--I--A--TD----------D------G------S----YGTKGHV--GM--LM-----N-------EI-----D-----FEV-DA-LYTCG-APAMLK--AVA-K-KY-DQLE---RLYIS--------------------------------------------MESRMACGIGACYACVEHDKEDESHALK-VCEDGPVFLGKQLSL---------
52 Fugue 94.7646%-107 - C3 -1EP3 PYRK_LACLM B:[2-262] ----------------------------------------------------------------------------------------------------------------------------------------------------SQLQEMMTVVSQREV-----AYN--------------IFEMVLK---GTL---V---DEMDL-PGQFLHLA--VPN--G-----------------------------A-----------MLLRRPISISSWDKR----AKTCTILYRI--G-----------------D--ETTG-T-YKLS-K-LESG-AKV-DVM-GPLGNG-------FPVAEV-------TSTDKILIIGGGIGVPPLYELAKQLEKT-------G-----CQ--MTILLGFASENVKILENEF----SNLKNV----------TL--K--I--A--TD----------D------G------S----YGTKGHV--GM--LM-----N-------EI-----D-----FEV-DA-LYTCG-APAMLK--AVA-K-KYDQL-E---RLYIS--------------------------------------------MESRMACGIGACYACVEHDKEDESHALK-VCEDGPVFLGKQLSL---------
5 PsiBlast_PDB 80.9730%-101 - C3 -4YRY ? A:[8-251] -----------------------------------------------------------------------------------------------------------------------------------------------------------EIVKKVKI-----AED--------------VFDFWIH---SPS---V---SKE-ARPGQFVVIR--LHE--K-----------------------------G-------------ERIPLTVADTKPE----EGLFRMVVKV--V-----------------G--K--T-T-HELS-L-KKEG-DTILDVV-GPLGNP-------SEIENY----------GNVLLVGGGVGIATLYPIAKALKEA-------G-----NN--ITTVLGARTKDYLIMVDEF----KEIS------------DV--L--L--V--TD----------D------G------S----AGMKGVV--TDA-MD-----K-------LF-----R-----ERKFDI-CWAVG-PTIMMKFCTLK-A-RE-FG-V---PIWVS--------------------------------------------LNPIMVDGTGMCGACRVT----VSGQIKFACVDGPEFRGEEV-----------
4 PsiBlast_PDB 78.4130%-100 - C3 -4YLF ? A:[8-251] -----------------------------------------------------------------------------------------------------------------------------------------------------------EIVKKVKI-----AED--------------VFDFWIH---SPS---V---SKE-ARPGQFVVIR--LHE--K-----------------------------G-------------ERIPLTVADTKPE----EGLFRMVVKV--V-----------------G--K--T-T-HELS-L-KKEG-DTILDVV-GPLGNP-------SEIENY----------GNVLLVGGGVGIATLYPIAKALKEA-------G-----NN--ITTVLGARTKDYLIMVDEF----KEIS------------DV--L--L--V--TD----------D------G------S----AGMKGVV--TDA-MD-----K-------LF-----R-----ERKFDI-CWAVG-PTIMMKFCTLK-A-RE-FG-V---PIWVS--------------------------------------------LNPIMVDGTGMCGACRVT----VSGQIKFACVDGPEFRGEEV-----------
35 HHSearch 75.1026% -97 * C3 *2R6H ? A:[8-289] ------------------------------------------------------------------------------------------------------------------------------------------------------KEWECEVLSNKNV-----STF--------------IKEFVVK---LPEGE-T---MNF-K-SGSYAQIK--IPK--YNIRYADYDIQDRFRGDWDKMDAWSLTCKNE-----------EETVRAYSMANYPAE----GNIITLNVRI--ATPPFDRAANKWKAGIKPG--I--S-S-SYIF-S-LKPG-DKV-MMS-GPYGD--------FHIQDT---------DAEMLYIGGGAGMAPLRAQILHLFRTLKT----G-----RK--VSYWYGARSKNEIFYEEDF----REIEREFP--------NFKFH--I--AL-SDPQPE------D------N------W----TGYVGFI--HQV-IY-----D-------NY-----LKDHDAPED-IE-YYMCG-PGPMAN--AVK-G-ML-EN-LGVPRNMLF--------------------------------------------FDDF-------------------------------------------------
41 HHSearch 72.6123%-101 - C3 -3W5H NB5R3_PIG A:[13-262] -------------------------------------------------------------------------------------------------------------------------------------------------------KYPLRLIDKEVV-----NHD--------------TRRFRFA---LPSPEHI---LGL-P-VGQHIYLS--ARI--D-----------------------------G-----------NLVIRPYTPVSSDDD----KGFVDLVIKV--YFKDTHPKFPAG------G--K--M-S-QYLE-S-MKIG-DTI-EFR-GPNGLLVYQGKGKFAIRPDKKSSPVIKTVKSVGMIAGGTGITPMLQVIRAIMKDPDD----H-----TV--CHLLFANQTEKDILLRPEL----EELRNEHSA-------RF--KLWY--T--VD----------RAPE---A------W----DYSQGFV--NEE-MI-----R-------DH-----LPPP--EEE-PL-VLMCG-PPPMIQ--YACLP-NL-ER-V---------------------------------------------------------------------------------------------------------
56 Fugue 71.0720% -94 - C3 -1GVH HMP_ECOLI A:[1-396] MLDAQTIATVKATIPLLVETGPKLTAHFYDRMFTHNPELKEIFNMSNQRNGDQREALFNAIAAYASNIENLPALLPAVEKIAQKHTSFQIKPEQYNIVGEHLLATLDEMFSPGQEVLDAWGKAYGVLANVFINREAEIYNENASKAGGWEGTRDFRIVAKTPR-----SAL--------------ITSFELEPVDGGA---V---AEY-R-PGQYLGVWLKPEG--F-----------------------------P-----------HQEIRQYSLTRKPDG----KGYRIAVKRE--EG----------------G--Q--V-S-NWLH-NHANVG-DVV-KLV-APAGD--------FFMAVA-------D-DTPVTLISAGVGQTPMLAMLDTLAKA-------G-----HTAQVNWFHAAENGDVHAFADEV----KELGQSLP--------RF--T--A--H--TWYRQPSEADRAK------G------Q----FDSEGLMDLSK--LE-----G-------AF-----S-----DPT-MQ-FYLCG-PVGFMQ--FTA-K-QL-VD-L---GV------------------------------------------------------------------------------------KQENIHYECFGPHKVL
40 HHSearch 67.5221%-105 - C3 -2EIX ? A:[11-233] -------------------------------------------------------------------------------------------------------------------------------------------------------YKKFMLREKQII-----NHN--------------TRLFRFN---LHH---PEDVVGL-P-IGQHMSVK--ATV--D-----------------------------G-----------KEIYRPYTPVSSDDE----KGYFDLIIKV--YEK---------------G--Q--M-S-QYID-H-LNPG-DFL-QVR-GPKGQ--------FDYKPN--------MVKEMGMIAGGTGITPMLQVARAIIKNPKE----K-----TI--INLIFANVNEDDILLRTEL----DDMAKKYS--------NFKVY--Y--VL-NNP---------PA-----G------W----TGGVGFV--SAD-MI-----K-------QH-----FSPP--SSD-IK-VMMCG-PPMMNK--AMQ-G-HL-ET-L---------------------------------------------------------------------------------------------------------
38 HHSearch 67.2922%-105 - C3 -2CND A:[12-259] -------------------------------------------------------------------------------------------------------------------------------------------------------RIHCRLVAKKEL-----SRD--------------VRLFRFS---LPSPDQV---LGL-P-IGKHIFVC--ATI--E-----------------------------G-----------KLCMRAYTPTSMVDE----IGHFDLLVKV--YFKNEHPKFPNG------G--L--M-T-QYLD-S-LPVG-SYI-DVK-GPLGHVEYTGRGSFVINGKQ------RNARRLAMICGGSGITPMYQIIQAVLRDQPED---H-----TE--MHLVYANRTEDDILLRDEL----DRWAAEYPD-------RL--KVWY--V--ID----------QVKRPEEG------W----KYSVGFV--TEA-VL-----R-------EH-----VPEG--GDD-TL-ALACG-PPPMIQ--FAI-SPNL-EK-M---------------------------------------------------------------------------------------------------------
30 HHSearch 66.6120%-101 - C3 -2PIA PDR_BURCE A:[8-287] -------------------------------------------------------------------------------------------------------------------------------------------------------FLRLKIASKEKI-----ARD--------------IWSFELT---DPQ---GAPLPPF-E-AGANLTVA--VP---------------------------------------------NGSRRTYSLCNDSQE----RNRYVIAVKR--DSN---------------G--R--GGSISFID-D-TSEG-DAV-EVS-LPRNE--------FPLDKR---------AKSFILVAGGIGITPMLSMARQLRAEG------L-----RS--FRLYYLTRDPEGTAFFDEL----TSDEWRS---------DV--K--I--H--HD----------H------G------D------PTKAF--DFWSVF-----E-------K------S-----KPA-QH-VYCCG-PQALMD--TVR-D-MT-GH-WP--SGTVHFESFGATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPSSCESGTCGSCKTALCSG-------------------------------
39 HHSearch 61.6620% -84 - C3 -2QDX ? A:[3-234] -------------------------------------------------------------------------------------------------------------------------------------------------------LYTERVLSVHHW-----NDT--------------LFSFKTT---RNP---G---LRF-K-TGQFVMIG--LEV--D-----------------------------G-----------RPLMRAYSIASPNYE-----EHLEFFSIKVPD-----------------G--P--L-T-SRLQ-H-LKEG-DEL-MVSRKPTGT--------LVHDDL-------LPGKHLYLLSTGTGMAPFLSVIQDPETYER-----Y-----EK--VILVHGVRWVSELAYADFI----TKVLPEHEYFGDQVKEKL--I--YYPL--VT----------R------E------P----FRNQGRQ--TDL-MRSGKLFE-------DIGLPPMN-----PQD-DR-AMICG-SPSMLE--ETS-A-VL-DS-F---------------------------------------------------------------------------------------------------------
49 HHSearch 61.4818% -93 - C3 -2B5O FENR_SYNP2 A:[122-375] -------------------------------------------------------------------------------------------------------------------------------------------------------PFLGKCIENYELVDEGGSGT--------------VRHVTFD---ISEG--D---LRY-L-EGQSIGII--PPG--EDKNG-------------------------K-----------PHKLRLYSIASTRHGDMEDNKTVSLCVRQ--LEYQDPESGETVY-----G--V--C-S-TYLC-N-LPVGTDDV-KIT-GPVGKE-------MLLPDD--------EDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFK-----GK--AWLIFGVPYTANILYKDDF----EKMAAENPD-------NFRLT--YA-I--SRE---------QK-----TADGG--K----VYVQSRV--SE--YA-----D-------ELFEM--IQ----KPN-TH-VYMCG-LKGMQP--PID-E-TF-TA-----------------------------------------------------------------------------------------------------------
33 HHSearch 61.4417% -93 - C3 -1FDR FENR_ECOLI A:[3-228] ------------------------------------------------------------------------------------------------------------------------------------------------------DWVTGKVTKVQNW-----TDA--------------LFSLTVH---AP----V---LPF-T-AGQFTKLG--LEI---------------------------------------------RVQRAYSYVNSPDN-----PDLEFYLVT--VPD---------------G--K--L-S-PRLA-A-LKPG-DEV-QVV-SEAAGF-------FVLDEV-------PHCETLWMLATGTAIGPYLSILRLGKDLDR-----F-----KN--LVLVHAARYAADLSYLPLM----QELEKRYEG-------KL--RIQT--VVSRE----------T------A------A----GSLTGRI--PA--LIE----S-------GELEST-IGLPMNKET-SH-VMLCG-NPQMVR--DTQ-Q-LL-KE-T---------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 61.3525%-130 - C3 -2EIX ? A:[37-230] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ED---V---VGL-P-IGQHMSVK--ATV--D-----------------------------G-----------KEIYRPYTPVSSDDE----KGYFDLIIKVYEK-----------------G--Q--M-S-QYID-H-LNPG-DFL-QVR-GPKGQ--------FDYKPN-------MV-KEMGMIAGGTGITPMLQVARAIIKN-------PKEKTIIN--LIFAN--VNEDDILLRTELDDMAKKYS------------NF--K--V--Y--YVLNNPP-----A------G------W----TGGVGFV--SADMIK-----Q-------HFS----P-----PSS-DIKVMMCG-PPMMNK--AMQ-G-HL--------------------------------------------------------------------------------------------------------------
43 HHSearch 60.9018% -78 - C3 -1GVH HMP_ECOLI A:[153-392] --------------------------------------------------------------------------------------------------------------------------------------------------------RDFRIVAKTPR-----SAL--------------ITSFELE---PVD---GGAVAEY-R-PGQYLGVW--LKP--E-----------------------------GFP---------HQEIRQYSLTRKPDG-----KGYRIAVKR--EEG---------------G--Q--V-S-NWLH-NHANVG-DVV-KLV-APAGD--------FFMAVA--------DDTPVTLISAGVGQTPMLAMLDTLAKAGH-----T-----AQ--VNWFHAAENGDVHAFADEV----KELGQSLP--------RFTAHT-W--Y--RQP---------S------EADRAKGQ----FDSEGLM--DLS-KL-----E-------GA-----FS----DPT-MQ-FYLCG-PVGFMQ--FTA-K-QL-VD-LGVKQENIH--------------------------------------------YECFGP-----------------------------------------------
44 HHSearch 60.7620% -98 - C3 -1CQX HMP_CUPNH A:[155-398] --------------------------------------------------------------------------------------------------------------------------------------------------------RTFVIREKRPE-----SDV--------------ITSFILE---PADGGPV---VNF-E-PGQYTSVA--IDVPAL-----------------------------G-----------LQQIRQYSLSDMPN-----GRTYRISVKR--EGGGPQPP----------G--Y--V-S-NLLHDH-VNVG-DQV-KLA-APYGS--------FHIDVD--------AKTPIVLISGGVGLTPMVSMLKVALQAP------P-----RQ--VVFVHGARNSAVHAMRDRL----REAAKTYE--------NLDLF--V--FY-DQ----------PLPE---D------VQGRDYDYPGLV--DVK-QI-----E-------KS-----IL----LPD-AD-YYICG-PIPFMR--MQH-D-AL-KN-LGIHEARIH--------------------------------------------YEVFGP-----------------------------------------------
46 HHSearch 60.6519% -97 - C3 -2RC5 ? A:[21-303] -------------------------------------------------------------------------------------------------------------------------------------------------------PYKAKVISNVLL-----TPETGTGKRPKKEGEALVHRIVLA---IDHS--A---YPY-V-IGQSGGVI--PPG--E-----------------------------DPEKKAKGLADVGYTVRLYSIASPSYSFGMKEDNIEFIIKR--DNIYNGNIQFK-------G--V--C-S-NYMC-D-LKPG-DEV-TMT-GPSGKK-------FLLPNT-------DFSGDIMFLATGTGIAPFIGMSEELLEH-------KLIKFTGN--ITLVYGAPYSDELVMMDYL----KGLESKHK--------NFKLI--T--AI-SRE---------EKN----S------F----DGGRMYI--SH--RV-----REQAEAVKKI-----L-----NGG-GR-FYICGGPKGMEK--GVI-E-EI-QK-IS--GNTGT--------------------------------------------YEEFKHHL---------------------------------------------