@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0086: (2015-12-12 )
MAFKVVQICGGLGNQMFQYAFAKSLQKHSNTPVLLDITSFDGSNRKMQLELFPIDLPYASAKEIAIAKMQHLPKLVRDALKYMGFDRVSQEIVFEYEPKLLKPSRLTYFYGYFQDPRYFDAISSLIKQTFTLPPPPENGNNKKKEEEYHRKLSLILAAKNSVFAHIRRGDYVGIGCQLGIDYQKKAVEYMAKRVPNMELFVFCEDLKFTQNLDLGYPFMDMTTRDKDEEAYWDMLLMQSCKHGIIANSTYSWWAAYLINNPGKIIIGPKHWLFGHENILCKEWVKIESHFEVKSQKYNA

Atome Classification :

(20 SA) ------.........10-------.....-...20........30........40...-....--.50.---....-------------...60........-70--------...---------------------------------------......80.-.--......90----......---...100-----..--......110..--.....120--.......-.130.......140.......150....-.---------..160--........170-...--.-...180----------------------------.........190--.--------......200...----------.----...210....---...------220------------.-----......230.......240....----.-.-..250.......260....----...270.......280.......290.......--------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------MAFKVVQICGG-------LGNQM-FQYAFAKSLQKHSNTPVLLDITSFDGSN-RKMQ--LELF---PIDL-------------PYASAKEIAIAKM-Q---------HLP---------------------------------------KLVRDALKY-M--GFDRVSQ-----EIVFEY---EPKLL------KP--SRLTYFYGYFQ--DPRYFDA---ISSLIKQ-TFTLPPPPENGNNKKKEEEYHRKLSLIL-A---------AKNS---VFAHIRRGDYV-GIG--C-QLGI------------------------------DYQKKAVEYMAK--R--------VPNMELFVFCED----------L----KFTQNLDLGY---PFM------DMT------------T-----RDKDEEAYWDMLLMQSC-KHGII----A-N-STYSWWAAYLINNPGKIII----GPKHWLFGHENILCKEWVKIESHFEVKSQKYNA--------------------------------
33 Fugue 80.7816% -54 * C3 *2YPD JHD2C_HUMAN A:[1-342] -------MIPHSWICEKHILWLKDYKNSS-NWKLFKECWKQ--GQPAVVSGVHKKMNI-SLWK--AESI---SLDF-------------GDHQADLLNCKDS-I---------ISN---------------------------------------ANVKEFWD-----GFEEVSK----------R---ETVVL------KL--KDWPSGEDFKTMMPARYEDL---LKSLPLP-EYCNPEGKFN-LASHLPGFFVRGPRLCS-AYGVVAAKDHDIGT---TNLHIEVSDVV-NIL--V-YVGIAKGNGI------------------------LSKAGILKKFEE--E--------DLDDILRKRLKDSSEIPGALWHI----YAGKDVDKIR---EFL------QKI------------S-----KEQGHDPIRDQSWYVNK-KLRQR----L-L-EEYGVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQEL-------------------------------
35 Fugue 76.3915% -66 * C2 *3HJH MFD_ECOLI A:[5-450] YRYTLPVKAGEQRLLGE-------LTGAA-CATLVAEIAERHAGPVVLIAPDMQNALR-LHDE--ISQFTDQMVMNLADWETLPYDSFSPHQDIISSRLSTL-Y---------QLPTMQRGVLIVPVNTLMQRVCPHSFLHGHALVMKKGQRLSRDALRTQLDS-A--GYRHVDQVMEHGEYATRG---ALLDLFPMGSELP--YRLDFFDDEID--SLRVFDVDSQRTLEEVE-AINLLPAHEFPTDKAAIELFRSQWRDTF-E---------VKRDPEHIYQQVSKGTLPAGIE--Y-WQPLFFSEPLPPLFSYFPANTLLVNTGDLETSAERFQADTLARFEN--RGVDPMRPLLPPQSLWLRVDE----------L----FSELKNWPRV---QLK------TEH------------L-----PTKAANANLGFQKLPDL-AVQAQ----Q-K-APLDALRKFLETFDGPVVF----SVES--EGRREALGELLARIKIAPQRIMRLDEASDRGRYLMIGAAEHGFVDTVRNLALICESDLL
37 Fugue 75.1819% -9 - C1 -3TZG - ? A:[28-272] ----DTYVTKVTDLTGE-------EEQVLKLEYDRDGKIIKYGDTPVRYEGDQITIGQMNKLC--NVTF---QIGK-------------G--KARE-SRARCML---------KVG---------------------------------------EEVYEADKQ-T--VYDYKGD-----TIFINS---DYRAT------SD--YR---FLKKVQ--GKYVFDQ---LGRLKEVMTVFTEANDS-------------------------------VSS---CHTYYNYDNNI-NYQ--A-NL---------------------------------------------------------NLQAYVIDYD-------------------GVDSFF---YFL------LNL------------G-----QLRNRTALPN--DIGYCMNHGL---------STYNVHANYRLDDENPVRI----EVLY-----------NYTKLLSRIDLSYNPL----------------------------------
31 Fugue 74.7511% -65 - C6 -2HHC ? A:[2-317] ----TKERFVISRRRTG-------FGDCL-WSLASAWSYAQRTGRTLVIDWRGSCYVE-QPFSNAFPAF---FEPV-------------EDIAGVPVICDDR-VNQLSFPGPFFPR---------------------------------------WWNRPSIDC-I--NRPDEQI-----FRERDE---LTELF------QA--REDSEANTIVC--DACLMWR---CSEEAER-LIFRNIKLRSEIRARIDALYEEHFS--------------GHSI---IGVHVRHWADS-ELA--L-HQVC------------------------------MAIRKAKA--LS--Y--------PKPVKVFLCTDS----------A----QVLDQVSGLF---PDVFAVPKSAEM------------G-----IEGGASALIDMYLLARC-ATVIR----F-P-PTSAFTRYARLLVPRIIEF----DNPGHLTMIDNP-----------------------------------------------------
4 PsiBlast_PDB 66.0530%-102 - C4 -4JKY KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR--------------------------------
3 PsiBlast_PDB 65.7930% -99 - C4 -4JLP KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQKEDDKPEVIKKR--------------------------------
8 PsiBlast_PDB 65.5030% -93 - C4 -4JLB KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR--------------------------------
7 PsiBlast_PDB 65.3630% -95 - C4 -4JLA KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR--------------------------------
6 PsiBlast_PDB 65.3030% -97 - C4 -4JL8 KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR--------------------------------
2 PsiBlast_PDB 65.0230% -93 - C4 -4JLO KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQKEDDKPEVIKKR--------------------------------
5 PsiBlast_PDB 64.8430% -91 - C4 -4JL6 KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR--------------------------------
9 PsiBlast_PDB 64.8130% -88 - C4 -4JLD KAD_AQUAE A:[21-103] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V-----FPKHGNVIF---DGF------PRT------------V-------KQAEALDEMLEKKGL-KVDHV----L-L-FEVPDEVVIERLSGRRINP----ETGEVYHVKYNPPPPGVKVIQREDDKPEVIKKR--------------------------------
38 Fugue 64.3012% -25 - C5 -2OCC - COX3_BOVIN C:[1-261] ------------------------MTHQT-HAY----HMVNPSPWPLTGALSALLMTS-GLTM--WFHF---NSMT-------------LLMIGLTTNMLTM-Y---------QWW---------------------------------------RDVIRESTF-Q--GHHTPAV-----QKGLRY---GMILF------II--SEVLFFTGFFW--A-FYHSS---LAPTPEL-GGCWPPT---GIHPLNPLEVPLLNTSVL-L---------ASGV---SITWAHHSLME-G-----------------------------------------DRKHMLQALFI--T--------ITLGVYFTLLQA----------S----EYYE-----A---PF-----------------------------TISDGVYGSTFFVATG-FHGLH----V-I-IGSTFLIVCFFRQLKFHFT----SNHHFGFEAGAWYWHFVDVVWLFLYVSIYWWGS--------------------------------
22 HHSearch 62.6115% -94 - C6 -2DE0 - FUT8_HUMAN X:[330-482] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QFVKY-LIRPQPWLEKEI--------EEATKKLG-F---------KHPV---IGVHVRR------TEAAF-HPIE------------------------------EYMVHVEEHFQL--LARRMQ---VDKKRVYLATDD----------P----SLLKEAKTKYPNYEFI------SDNSISWSAGLHNRYT-----ENSLRGVILDIHFLSQA-DFLVC----T-FSSQVCRVAYEIMQTLHPDAS----ANFHSLDDIYYFGGQNAHNQIAIYAHQPRTADE--------------------------------
36 Fugue 60.8612% -28 - C2 -1N5D CBR1_PIG A:[1-288] -----SSNTRVALVTGA---------NKG-IGFAIVRDLCRQFAGDVVLTAR--DVAR-GQAA--VKQL---QAEG-------------LSPRFHQLDIIDL-Q---------SIR---------------------------------------ALCDFLRKE-Y--G-------------------------------GL--DVLVNNAAIAF--QLDNPTP---FHIQAEL-TMKTNFMGTRNVCTELLPLIKPQGRVVNVS---------STEG---VRALNECSPEL-QQK--F-KSET------------------------------ITEEELVGLMNK--F--------VEDTKNGVHRKE----------GWSDSTYGVTKIGVS---VLS------RIY------------A-----RKLREQRAGDKILLNAC-CPGWVRTDMG-G-PKAPKSPEVGAETPVYLAL----LPSDAEGPHGQFVTDKKVVEWGVPPESYPWVNA--------------------------------
32 Fugue 59.7314% -47 - C5 -3RV1 - ? A:[15-256] -------------------------SNEL-KVREFYRLHNACVKLKESIKLIYENPLV-TDQN--VLNL---G-------------------TAENTIDYTI-L---------NTP---------------------------------------TLNVAKTLL-G--NRYSLDL-----IDLFQS---HDFKD------SN--TDVDMFIKY-----PVVYD-----ENLENL-AFMHKSQLSN-----ERLEFLGDSWLGA-L---------VSYI---VYTRFPSAN----------------------------------------------EGMLSQMKES--I--------VNNNNLFDWSTK----------L----NFTKRLQGNI---A-------------------------------------------------KRY----A-D-CVQAYIGALVIDRFGTEFL----DIKEWLEELSEKKLAK-------------------------------------------------
21 HHSearch 58.7913% -73 - C6 -2HHC ? A:[126-300] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVCDACL---MWRCSEE---AERLIFR-NIKLRSEIRARI-----D---ALYEEHF-S---------GHSI---IGVHVRH--------W-A-DSELAL----------------------------HQVCMAIRKAKALSY--------PKPVKVFLCTDS----------A----QVLDQVSGLFPDVFAVP-----K---------------SAEMGIEGGASALIDMYLLARC-ATVIRF---PPT-SAFTRYARLLVPRIIEFDN----PGHLTMIDNP-------------------------------------------------------
40 Fugue 55.9716% -40 - C5 -4HR1 - ? A:[3-120] -------------------------------------------------------------------------------------------FNGAQTVIQKI-S---------WLR---------------------------------------TAIAFLKGYMETTGATKKEL-----EQVEKL---KERVD------EI--ATAVNWDVYAQ--YAR---------------------GDFNLLSDDEYKEIQKALLVLE-D---------IKEQ---IIVEMLR---V-GLA--QGQMGT------------------------------LKISDYLDSLDS--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 55.0735% -80 - C4 -4CF7 KAD_AQUAE A:[21-71] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKEK---GFVHISTGDIL-REA--V-QKGT------------------------------PLGKKAKEYMER--GEL------VPDDLIIALIEE----------V----FPKHGNVIFD---GFP------RTV------------K-----QAEALDEMLEKKGLKVD-HVLLF----E-V-PDEVVIERLSGRRINPETG----EVYHVKYNPPPPGVKVIQREDDKPEVIKKRLEV--------------------------------
34 Fugue 54.7418% -37 - C3 -2AO9 - ? A:[13-132] -------------------------------------------------------------------------------------------------MMAKL-D---------ELK---------------------------------------QKLTAKQIQ-A--AYLLVEN-----ELMEEEKRTQDEMA------NELGINRTTLWEWRT--KNQDFIA---FKSEVAD-SFLAE---------KREQVYSKLMQLIL-G---------PQPS---VKAMQLYMQRF-GLL--T-DKKV------------------------------IEGDL---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------