@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_1124: (2015-12-21 )
MAKKVFKRLEKLFSKIQNDKVYGVEHGVEVVKSLASAKFDETVEVALRLGVDPRHADQMVRGAVVLLHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEIKNGRIDFDMVIATPDMMAVVGKVGRILGPKGLMPNPKTGTVTMDIAKAVTNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGKYIRNAALSLTMSPSVNLDAQELMDIK

Atome Classification :

(21 SA) .........10........20........30...----...---.-.40........-50.........60........70........80........90........100...--..------..110----.........120....-.-..130.......140....--...150.......160.......170.......180.......190.......200......-.-210.......220.......230..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MAKKVFKRLEKLFSKIQNDKVYGVEHGVEVVKSL----ASA---K-FDETVEVALRL-G-VDPRHADQMVRGAVVLLHGTGKKVRVAVFAKDIKQDEAKNAGADVVGGDDLAEEI--KN------GRI------DFDMVIATPDMMAVVG-K-VGRILGPKGLMPNPKTGTV--TMDIAKAVTNAKSGQVNFRVDKKGNVHAPIGKASFPEEKIKENMLELVKTINRLKPSSAKGK-Y-IRNAALSLTMSPSVNLDAQELMDIK
31 HHSearch 96.3951% -97 - C2 -3QOY RL1_AQUAE A:[2-235] --ARRGKKYIEASKLVDRNKRYTLEEAVDLLKKMEEV-LQR---R-FDETVELAMRL-N-VDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYVGGDELINKI--LKE-----EWT------DFDVAIATPEMMPKVA-K-LGRILGPRGLMPSPKTGTV--TTNVEQAIKDAKRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQ-Y-IKNMAVSLTMSPSVKLDINEVLKKL
1 PsiBlast_PDB 94.4253%-103 - C2 -3QOY RL1_AQUAE A:[15-234] ---------------VDRNKRYTLEEAVDLLKKM----EEVLQRR-FDETVELAMRL-N-VDPRYADQMVRGSVVLPHGLGKPIKVVVFAEGEYAKKAEEAGADYVGGDELINKIL-KE------EWT------DFDVAIATPEMMPKVA-K-LGRILGPRGLMPSPKTGTV--TTNVEQAIKDAKRGRVEFKVDKAGNVHMPVGKISFEKEKLIDNLYAAIDAVVRAKPPGAKGQ-Y-IKNMAVSLTMSPSVKLDINEVLKKL
14 PsiBlast_PDB 93.5348% -97 - C2 -1ZHO RL1_THETH A:[5-227] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
13 PsiBlast_PDB 92.9748% -99 - C2 -2HW8 RL1_THETH A:[5-227] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-MGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
5 PsiBlast_PDB 92.9349% -95 - C2 -4QG3 RL1_THETH A:[5-227] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMVPSVRINPHS-----
11 PsiBlast_PDB 92.5148% -98 - C2 -3UMY RL1_THETH A:[5-227] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTAMGPSVRINPHS-----
4 PsiBlast_PDB 92.4049% -99 - C2 -3U4M RL1_THETH A:[6-228] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
9 PsiBlast_PDB 91.9948% -95 - C2 -3U56 RL1_THETH A:[6-228] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTVMGPSVRINPHS-----
41 Fugue 91.4349%-106 - C2 -487D - RL1_ECOLI H:[1-224] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKLG--IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKILD--------GWM------DFDAVVATPDVMGAVG-SKLGRILGPRGLLPNPKAGTVGF--NIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKG-TF-LRSVYVTTTMGPSVRINPHS-----
6 PsiBlast_PDB 91.3248% -95 - C2 -4QVI RL1_THETH A:[6-228] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTLGPSVRINPHS-----
8 PsiBlast_PDB 91.2848%-101 - C2 -1AD2 RL1_THETH A:[5-227] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
10 PsiBlast_PDB 91.2048% -94 - C2 -4REO RL1_THETH A:[9-228] ---------RALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTVMGPSVRINPHS-----
7 PsiBlast_PDB 90.9448%-101 - C2 -487D - RL1_ECOLI H:[1-223] ------KRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKACFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
12 PsiBlast_PDB 90.0949%-103 - C2 -3TG8 RL1_THET8 A:[15-227] ---------------VDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIK-GRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
21 PsiBlast_CBE 87.3049% -93 - C2 -4QGB RL1_THETH B:[1-215] --------------KVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMVPSVRINPHS-----
15 PsiBlast_PDB 86.4849% -91 - C2 -4QGB RL1_THETH A:[1-215] --------------KVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHGLGKQVRVLAIAKGEKIKEAEEAGADYVGGEEIIQKI--LD------GWM------DFDAVVATPDVMGAVGSK-LGRILGPRGLLPNPKAGTV--GFNIGEIIREIKAGRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMVPSVRINPHS-----
16 PsiBlast_PDB 84.5250% -76 - C2 -3J5S - RL1_ECOLI F:[3-225] ---KLTKRMRVIREKVDATKQYDINEAIALLKEL----ATA---K-FVESVDVAVNL-G-IDARKSDQNVRGATVLPHGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLADQI--KK------GEM------NFDVVIASPDAMRVVG-Q-LGQVLGPRGLMPNPKVGTV--TPNVAEAVKNAKAGQVRYRNDKNGIIHTTIGKVDFDADKLKENLEALLVALKKAKPTQAKGV-Y-IKKVSISTTMGAGVAVDQAGLSASV
35 HHSearch 80.8046% -92 * C2 *2OV7 - RL1_THETH A:[4-228] -----GKRYRALLEKVDPNKIYTIDEAAHLVKEL----ATA---K-FDETVEVHAKL-G-IDPRRSDQNVRGTVSLPHG------------------------------------------------------------------------------------------------------------GRIEFRNDKTGAIHAPVGKASFPPEKLADNIRAFIRALEAHKPEGAKGT-F-LRSVYVTTTMGPSVRINPHS-----
20 PsiBlast_PDB 71.2729% -80 - C2 -1DWU - RL1_METTL A:[9-212] --------------------------AVKEARSL----AKP---RNFTQSLDLIINL-KELDLSRPENRLKEQVVLPNGRGKEPKIAVIAKGDLAAQAEEMGLTVIRQDELEELG--KN------KKMAKKIANEHDFFIAQADMMPLVG-KTLGPVLGPRGKMPQPVPANA----NLTPLVERLKK-TVLINTRDKPLFHVLVGNEKMSDEELAENIEAILNTVSR---KYEKGL-YHVKSAYTKLTMGPPAQIEK-------
33 HHSearch 61.1323% -79 - C2 -2NOQ - RL1A_YEAST G:[6-213] -----------------------VREHVKELLKYSNETKKR---N-FLETVELQVGL-KNYDPQR-DKRFSGSLKLPNCPRPNMSICIFGDAFDVDRAKSCGVDAMSVDDLKKLN--KNKKLIKKLSK------KYNAFIASEVLIKQVP-RLLGPQLSKAGKFPTPVSH----NDDLYGKVTDVRS-TIKFQLKKVLCLAVAVGNVEMEEDVLVNQILMSVNFFVSLLKK--NWQ-N-VGSLVVKSSMGPAFRL---------
48 Fugue 26.9389% 92 - C2 -1P0O RL1_HELPY A:[1-19] -AKKVFKRLEKLFSKIWNWK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------