@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2184: (2016-04-01 )
MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSKKLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEADLKSGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN

Atome Classification :

(20 SA) .........10........20........30.....----...40........50..--......60..------.------.---.---...--70....---....80........90........100-.-------------...-.------------...-110.......120-..--------------------.......130.......140.......150.......160.----.--.-.-...170...-..-..180.......190.......200..---------...-..210.......220-.......230.-..---...---.240...---....250.......260-......---.-270-...-.-....280.......290
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPK----IVATTVAITEIMDKLDL--PLVGIPSSSK------K------L---P---KRY--ADVKET---GSPMGPDLEIIRMLKPDMVLSTKTL-E-A-------------DLK-S------------GFE-GADLEADFLDF---TS--------------------IASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAK----K--K-K-PTVLILMGV-PG-SYLVVTEHAYIGDLVKLAGGENVIKDQ---------KVE-YLASNTEYLQSANPD-IILRAAHGMPA-EV---VKM---FDEEFKT---NDIWKHFDAVKNNRVYD-LDENLF---G-M-T-ASL-N-APEALKEMEKMLYDN-
21 HHSearch 99.0453% -94 - C1 -2Q8P ISDE_STAAN A:[3-260] --------------------------------GEFR----IVPTTVALTMTLDKLDL--PIVGKPTSYK------T------L---P---NRY--KDVPEI---GQPMEPNVEAVKKLKPTHVLSVSTI-K-D-------------EMQ-P------------FYK-QLNMKGYFYDF---DS--------------------LKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAKQ---K--K-H-PKVLILMGV-PG-SYLVATDKSYIGDLVKIAGGENVIKVK---------DRQ-YISSNTENLLNINPD-IILRLPHGMPE-EV---KKM---FQKEFKQ---NDIWKHFKAVKNNHVYD-LEEVPF---G-I-T-ANV-D-ADKAMTQLYDLFYK--
1 PsiBlast_PDB 98.6353% -91 - C1 -2Q8Q ISDE_STAAN A:[4-259] ---------------------------------EFR----IVPTTVALTMTLDKLDL--PIVGKPTSYK------T------L---P---NRY--KDVPEI---GQPMEPNVEAVKKLKPTHVLSVSTI-K-D-------------EMQ-P------------FYK-QLNMKGYFYDF---DS--------------------LKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAK----Q--K-KHPKVLILMGV-PG-SYLVATDKSYIGDLVKIAGGENVIKVK---------DRQ-YISSNTENLLNINPD-IILRLPHGMPE-EV---KKM---FQKEFKQ---NDIWKHFKAVKNNHVYD-LEEVPF---G-I-T-ANV-D-ADKAMTQLYDLFY---
2 PsiBlast_PDB 97.8351% -94 - C1 -2Q8P ISDE_STAAN A:[4-259] ---------------------------------EFR----IVPTTVALTMTLDKLDL--PIVGKPTSYK------T------L---P---NRY--KDVPEI---GQPMEPNVEAVKKLKPTHVLSVSTI-K-D-------------EMQ-P------------FYK-QLNMKGYFYDF---DS--------------------LKGMQKSITQLGDQFNRKAQAKELNDHLNSVKQKIENKAAK----Q--K-KHPKVLILMGV-PG-SYLVATDKSYIGDLVKIAGGENVIKVK---------DRQ-YISSNTENLLNINPD-IILRLPHGMPE-EV---KKM---FQKEFKQ---NDIWKHFKAVKNNHVYD-LEEVPF---G-I-T-ANV-D-ADKAMTQLYDLFY---
23 HHSearch 73.9320% -90 - C1 -2R7A ? A:[2-256] ---------------------------------AER----IVVAGGSLTELIYAMGAGERVVGVDETTS-------------Y---P---PET--AKLPHI---GYWKQLSSEGILSLRPDSVITWQDAGP-Q-------------IVL-D------------QLR-AQKVNVVTLPRVP-AT--------------------LEQMYANIRQLAKTLQVPEQGDALVTQINQRLERVQQNVAAK---K--A-P-VKAMFILSA-GGSAPQVAGKGSVADAILSLAGAENVATH-----------QQ-YKSYSAESLIAANPE-VIVVTSQMVDG------------DINRLRS---IAGITHTAAWKNQRIIT-VDQNLI-----L-G-MGP-R-IADVVESLHQQLWPQ-
22 HHSearch 69.6819% -82 - C1 -2R79 ? A:[1-266] --------------------------------LPQR----WVSAGGSLSEWVVALGGESKLVGVDTTS-------Q------H---P---QAL--KQLPSV---GYQRQLAAEGVLALRPDILIGTEEMGP-P-------------PVL-K------------QLE-GAGVRVETLSAK--PD--------------------LEALESNLKKLGDWLGVPQRAEAAELDYRQRLRRQADWIAAAQKSQ--P-A-PGVLLVIGNAGG-QLLVAGRNTGGDWVLNRAGARNLATH-----------EG-YKPISVEALAALDPV-AVVIADRSLEG-D-----AA---RAALLKQ---NPGLAPTRAARDGRLLV-LDPTLL---V-G-G-LGP-R-LPDGLAALSAAFYPS-
25 HHSearch 66.6121% -59 - C1 -3LHS ? A:[16-294] --------------------------TVKVPKDAKR----IVVLEYSFADALAALDV--KPVGIADDGK------KKRI---IKPVR---EKI--GDYTSV---GTRKQPNLEEISKLKPDLIIADSSR-H-K-------------GIN-K------------ELN-KIA-PTLSLKSFD-GD--------------------YKQNINSFKTIAKALNKEKEGEKRLAEHDKLINKYKDEIKF----D--R-N-QKVLPAVVA-KA-GLLAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGP-YLQLDTEHLADLNPE-RMIIMTDHAKK-D-----SA---EFKKLQE---DATWKKLNAVKNNRVDI-VDRDVW---A-RSR-GLI-S-SEEMAKELVELSKKE-
45 Fugue 64.6720% -81 - C1 -1N2Z BTUF_ECOLI A:[1-245] --------------------------------AAPR----VITLSPANTELAFAAGI--TPVGVSS--YSD-----------Y---P---PQA--QKIEQV---STWQGMNLERIVALKPDLVIAWRGGNA-E-------------RQV-D------------QLA-SLGIKVMWVDA---TS--------------------IEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYAD----K--P-K-KRVFLQFGI--N-PPFTSGKESIQNQVLEVCGGENIFKDS---------RV-PWPQVSREQVLARSPQ-AIVITGGPDQI-PK---IKQ---YWG-----------EQL----KIPVIP-LTSDWF---E---R-ASP-R-IILAAQQLCNALSQVD
46 Fugue 64.1718% -62 - C1 -2CHU ? A:[10-296] LPISMSDEGDSFLVKDSLGENKIPKNPS-------K----VVILDLGILDTFDALKL--NDKVVGVPAK------N------L---P---KYL--QQFKNKPSVGGVQQVDFEAINALKPDLIIISGRQ-S-K-------------FYD-K------------LKEIAPTLFVGLDNA---NF--------------------LSSFENNVLSVAKLYGLEKEALEKISDIKNEIEKAKSIV------D--E-D-KKALIILTN-SN-KISAFGPQSRFGIIHDVLGINAVDENI---------KGK-SI--NSEFILEKNPD-YIFVVDRNVIL-GN---KER---AQGILD----NALVAKTKAAQNKKIIY-LDPEYWYLAS-G-N-GLE-S-LKTMILEIKNAVK---
44 Fugue 63.5320% -67 - C1 -1N2Z BTUF_ECOLI A:[1-245] --------------------------------AAPR----VITLSPANTELAFAAGI--TPVGVSSYSD------Y----------P---PQA--QKIEQV---STWQGMNLERIVALKPDLVIAWRGGNA-E-------------RQV-D------------QLA-SLGIKVMWVDA---TS--------------------IEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYAD----K--P-K-KRVFLQFG--IN-PPFTSGKESIQNQVLEVCGGENIFKDS---------RVP-WPQVSREQVLARSPQ-AIVIT-------------------GGPDQI---PKIKQYWGEQLKIPVIP-LTSDWF---E---R-ASP-R-IILAAQQLCNALSQVD
33 HHSearch 63.2819% -46 * C1 *3TNY ? A:[27-296] --------------------------KTEVPANPKR----VVILTNEGTEALLELGV--KPVGAVKSWTGDP---W------Y---PHIKDKM--KDVKVV---GDEGQVNVETIASLKPDLIIGNKMR-H-E-------------KVY-E------------QLK-AIA-PTVFSET----L--------------------RGEWKDNFKFYAKALNKEKEGQKVVADYESRMKDLKGKLGD----KVNQ-E-ISMVRFM---PG-DVRIYHGDTFSGVILKELGFKRPGDQNKD-------DFA-ERNVSKERISAMDGD-VLFYFTFDKGNEKK---GSE---LEKEYIN---DPLFKNLNAVKNGKAYK-VDDVIW---N-T-AGGVI-A-ANLLLDDIEKRFV---
24 HHSearch 62.8719% -69 - C1 -3MD9 HMUT_YERPE A:[2-254] ---------------------------------AER----IVTIGGDVTEIAYALGAGDEIVARDSTS-------Q------Q---P---QAA--QKLPDV---GYMRTLNAEGILAMKPTMLLVSELA-QPS-------------LVL-T------------QIA-SSGVNVVTVPGQ--TT--------------------PESVAMKINAVATALHQTEKGQKLIEDYQQRLAAVNKTP---------L-P-VKVLFVMSH-GGLTPMAAGQNTAADAMIRAAGGSNAMQG----------FSR-YRPLSQEGVIASAPD-LLLITTDGVKA-L------G---SSENIWK---LPGMALTPAGKHKRLLV-VDDMAL-----L-G-FGL-E-TPQVLAQLREKMEQM-
32 HHSearch 62.8020% -68 - C1 -1N2Z BTUF_ECOLI A:[1-244] --------------------------------AAPR----VITLSPANTELAFAAGI--TPVGVSSYSD-------------Y---P---PQA--QKIEQV---STWQGMNLERIVALKPDLVIAWRGG-NAE-------------RQV-D------------QLA-SLGIKVMWVDA---TS--------------------IEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYAD----K--P-K-KRVFLQFGI-N--PPFTSGKESIQNQVLEVCGGENIFKDS---------RVP-WPQVSREQVLARSPQ-AIVITGGPDQ--------------IPKI-----KQYWGEQ---LKIPVIP-LTSD-W---F-E-R-ASP-R-IILAAQQLCNALSQV-
28 HHSearch 62.7317% -67 - C1 -3PSH Y1472_HAEIN A:[11-300] --------------------------KVTIPDHINR----AVVLQHQTLNIAVQLDATKQIVGVLSNWKKQLGKNYVR----L---A---PEL--ENMAMP---GDLNSVNIESLLALKPDVVFVTNYA-P-S-------------EMI-K------------QIS-DVNIPVVAISL---RTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKKQQGDELVKAAFANRKLLADRLGDV---S--A-D-KRVRTYMAN--P-DLGTYGSGKYTGLMMEHAGAYNVAAAT---------IKG-FKQVSLENVLEWNPA-VILVQDRYPD-------------VVPQILN---DQGWANIQALKDKKVFL-MPEYAK---AWG-Y-PMP-EALALGEVWLAKALYPQ-
7 PsiBlast_PDB 61.8126% -45 - C1 -3LHS ? A:[11-287] -------------------------KDENGTVKVPKDAKRIVVLEYSFADALAALDV--KPVGIADDGK------KKRIIKPV---R---EKI--GDYTSV---GTRKQPNLEEISKLKPDLIIADSSR-H-K-------------GIN-KELNKIAPTLSLKSFD-G-DYKQNINSF---KT--------------------IAKALNKEKE-GEK--RLAEHDKL---INKYKDEIKFDRNQ----K--V-L-PAVVAKAGL------LAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGP-YLQLDTEHLADLNPERMIIMTDHA----------KK---DSAEFKKLQEDATWKKLNAVKNNRVDI-VDRDVW---A-R-S-RGL-I-SSE---EMAKEL----
6 PsiBlast_PDB 61.8126% -43 - C1 -3EIW ? A:[11-287] -------------------------KDENGTVKVPKDAKRIVVLEYSFADALAALDV--KPVGIADDGK------KKRIIKPV---R---EKI--GDYTSV---GTRKQPNLEEISKLKPDLIIADSSR-H-K-------------GIN-KELNKIAPTLSLKSFD-G-DYKQNINSF---KT--------------------IAKALNKEKE-GEK--RLAEHDKL---INKYKDEIKFDRNQ----K--V-L-PAVVAKAGL------LAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGP-YLQLDTEHLADLNPERMIIMTDHA----------KK---DSAEFKKLQEDATWKKLNAVKNNRVDI-VDRDVW---A-R-S-RGL-I-SSE---EMAKEL----
8 PsiBlast_PDB 61.4026% -46 - C1 -3LI2 ? A:[11-287] -------------------------KDENGTVKVPKDAKRIVVLEYSFADALAALDV--KPVGIADDGK------KKRIIKPV---R---EKI--GDYTSV---GTRKQPNLEEISKLKPDLIIADSSR-H-K-------------GIN-KELNKIAPTLSLKSFD-G-DYKQNINSF---KT--------------------IAKALNKEKE-GEK--RLAEHDKL---INKYKDEIKFDRNQ----K--V-L-PAVVAKAGL------LAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGP-YLQLDTEHLADLNPERMIIMTDHA----------KK---DSAEFKKLQEDATWKKLNAVKNNRVDI-VDRDVW---A-R-S-RGL-I-SSE---EMAKEL----
3 PsiBlast_PDB 60.8522% -78 - C1 -1N4A BTUF_ECOLI A:[2-211] ----------------------------------PR----VITLSPANTELAFAAGI--TPVGV-SSYS------D------Y---P---PQA--QKIEQV---STWQGMNLERIVALKPDLVIAWRGG-N-A-------------ERQVD------------QLA-SLGIKVMWVDA---TS--------------------IEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYAD----K--P-K-KRVFLQFGI-NP-PFTSGKESIQ-NQVLEVCGGENIFKDS---------RVP-WPQVSREQVLARSPQ-AIV--ITGGPD-QI---PKIKQYWGEQLK-----------------------------------------------------------
35 HHSearch 60.8020% -57 - C1 -3GFV YCLQ_BACSU A:[27-298] --------------------------GTKVPKNPKK----VVVFDFGSLDTLDKLGLDDIVAGLPKQVLP-----K------Y---L---SKFKDDKYADV---GSLKEPDFDKVAELDPDLIIISARQ---S-------------ESY-K------------EFS-KIA-PTIYLGVDTAKY--------------------MESFKSDAETIGKIFDKEDKVKDELANIDHSIADVKKTAEK----L--NKN-GLV--IMAN-DG-KISAFGPKSRYGLIHDVFGVAPADQNIKA-------STH-GQSVSYEYISKTNPD-YLFVIDRGTAI-GE----TS---STKQVVE---NDYVKNVNAVKNGHVIY-LDSATW---YLS-G-GGL-ESMTQMIKEVKDGLEKE-
34 HHSearch 60.6920% -55 - C1 -3MWF ? A:[14-294] --------------------------TTEIKGKPKR----VVTLYQGATDVAVSLGV--KPVGAVESWTQKPKFEY------I---K---NDL--KDTKIV---GQEPAPNLEEISKLKPDLIVASKVR-N-E-------------KVY-D------------QLS-KIA-PTVSTD-----T--------------------VFKFKDTTKLMGKALGKEKEAEDLLKKYDDKVAAFQKDAKAKYKDA--W-P-LKASVVNFR-AD-HTRIYAG-GYAGEILNDLGFKRNKDLQKQVDNG---KDI-IQLTSKESIPLMNAD-HIFVVKSDPNA-KDAALVKK---TESEWTS---SKEWKNLDAVKNNQVSDDLDEITW---N-L-A-GGYKS-SLKLIDDLYEKLNIE-
10 PsiBlast_PDB 60.2527% -43 - C1 -3EIX ? A:[11-287] -------------------------KDENGTVKVPKDAKRIVVLEYSFADALAALDV--KPVGIADDGK------KKRIIKPV---R---EKI--GDYTSV---GTRKQPNLEEISKLKPDLIIADSSR-H-KGINKELNKIAPTLSLK-S-------------FD-G-DYKQNINSF---KT--------------------IAKALNKEKE-GEK--RLAEHDKL---INKYKDEIKFDRNQ----K--V-L-PAVVAKAGL------LAHPNYSYVGQFLNELGFKNALSDDVTKGLSKYLKGP-YLQLDTEHLADLNPERMIIMTDHA----------KK---DSAEFKKLQEDATWKKLNAVKNNRVDI-VDRDVW---A-R-S-RGLIS-SEEMAKEL--------