@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA4992: (2016-03-03 )
MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYGRSEERLGPLLRGQREHWVIVSKVGEEFVDGQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALREGDCAMVTYNLNERAERPVIEYAAAHAKGILVKKALASGHACLGAGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAAQALKKA

Atome Classification :

(20 SA) .........10........20........30..-......40........50........60........70.--.---------......80..-------.-.....90........100----.......110.......120.......130.......140----------------.......150.......160.......170.......180------..--.......190....--....200.......210.......220--------------------.-----------------------------------------.--------------------------------------------.....230.......240.......250.......260..-.--....270
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD-QGVKYPSGFTIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEEFVDG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALASGHAC--------------------L-----------------------------------------G--------------------------------------------AGQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALKKA
21 PsiBlast_CBE 99.10100%-112 - C7 -4EXA ? F:[23-290] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD-QGVKYPS--TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEE---G----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALAS----------------------------------------------------------------------------------------------------------------GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
23 PsiBlast_CBE 97.60100%-112 - C7 -4EXA ? D:[23-290] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD----------TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEEFVDG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALAS----------------------------------------------------------------------------------------------------------------GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
25 PsiBlast_CBE 97.29100%-115 - C7 -4EXA ? B:[23-290] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGR-----------TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEEFVDG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALAS----------------------------------------------------------------------------------------------------------------GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
22 PsiBlast_CBE 97.29100%-115 - C7 -4EXA ? E:[23-290] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD----------TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEEFVDG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALAS----------------------------------------------------------------------------------------------------------------GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
2 PsiBlast_PDB 97.17100%-110 - C7 -4EXB - ? A:[1-268] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD----------TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEE--DG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALAS----------------------------------------------------------------------------------------------------------------GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
1 PsiBlast_PDB 97.01100%-116 - C7 -4EXA ? A:[23-290] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD----------TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEEFVDG----QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALA------------------------------------------------------------------------------------------------------------------QDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
24 PsiBlast_CBE 96.85100%-115 - C7 -4EXA ? C:[23-290] MIRDTLHDLHRPLGDTGLAVSPLGLGTVKFGRD----------TIPDDREAADLLALARDLGINLIDTAPAYG--R---------SEERLGPLLR-------G-QREHWVIVSKVGEE--------QSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLD----------------ILENSEVYPTLAALKREGLIGAYGLSGKTVEGGLRALR--------EG--DCAMVTYN-LNERA--ERPVIEYAAAHAKGILVKKALAS----------------------------------------------------------------------------------------------------------------GQDPVRASFELVFDQPGVAAAIVGTINPLHLAHNVAMAA-Q--ALK--
45 HHSearch 72.3429% -81 * C7 *1PYF IOLS_BACSU A:[2-300] -------KK-AKLGKSDLQVFPIGLGTNAVGGH-NL------YPNLNEETGKELVREAIRNGVTMLDTAYIYG--IGR-------SEELIGEVLRE------F-NREDVVIATKAAHRKQGN----DFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHT-------------------PKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANKDG------LV--DVLQGEYN-LLNREA-EKTFFPYTKEHNISFIPYFPLVSGLLA--------------------G-----------------------------------------KYTEDTTFPEGDLRNEQEHFKGERFKENIRKVNKLAPIAEK----HNVDIPHIVLAWYLARPEIDILIPGAKRADQLIDNIKTAD-V--TLSQE
43 HHSearch 72.1030% -76 - C7 -1PZ1 GS69_BACSU A:[1-301] ------MEY-TSIADTGIEASRIGLGTWAIGGTMWG--------GTDEKTSIETIRAALDQGITLIDTAPAYG--FGQ-------SEEIVGKAIKEY-----M-KRDQVILATKTALDWKNN----QLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLV-------------------PIEETAEVMKELYDAGKIRAIGVSNFSIEQMDTFRAVA------PL--HTIQPPYN-LFEREM-EESVLPYAKDNKITTLLYGSLCRGLLT--------------------GKMTEEYTFEGDDLRNHDPKFQKPRFKEYLSAVNQLDKLAKTR--------------------------------------------YGKSVIHLAVRWILDQPGADIALWGARKPGQLEALSEITG-W--TLNSE
46 HHSearch 69.7429% -71 - C7 -1LQA TAS_ECOLI A:[1-329] ------MQY-HRIPHSSLEVSTLGLGTMTFGEQ------------NSEADAHAQLDYAVAQGINLIDVAEMYP--VPPRPETQGLTETYVGNWLAKH-----G-SREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAP--AVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRI--VTIQNPYS-LLNRSF-EVGLAEVSQYEGVELLAYSCLGFGTLT--------------------G-----------------------------------------KYLNGAKPAGARNTLFSRFTRYSGEQTQKAVAAYVDIARR-----HGLDPAQMALAFVRRQPFVASTLLGATTMDQLKTNIESLH-L--ELSED
44 HHSearch 68.9327% -94 - C7 -1YNP ? A:[20-298] -----HMKK-RQLGTSDLHVSELGFGCMSLGT--------------DETKARRIMDEVLELGINYLDTADLYN--QGL-------NEQFVGKALK-------G-RRQDIILATKV-----------------SKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDD-------------------PIDETIEAFEELKQEGVIRYYGISSIRPNVIKEYLKRS------NI--VSIMMQYS-ILDRR--PEEWFPLIQEHGVSVVVRGPVARGLLS--------------------R-----------------------------------------RPLPEGEGYLNYRYDELKLLRESLP--------------------TDRPLHELALQYCLAHDVVATVAAGASSIDQVKANVQAVEAT--PLTAE
47 HHSearch 66.9923% -79 - C7 -3N6Q GPR_ECOLI A:[10-323] ---YGQMQY-RYCGKSGLRLPALSLGLWHNFGH-----------VNALESQRAILRKAFDLGITHFDLANNYG--PPPGS-----AEENFGRLLREDFA---A-YRDELIISTKAGYDMWPG----PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENT-------------------PMEETASALAHAVQSGKALYVGISSYSPERTQKMVELLREWKI-PL--LIHQPSYN-LLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLT--------------------GKYLLTEANLNSLRLLNEMAQ---------------------Q--------------------------------------------RGQSMAQMALSWLLKDDRVTSVLIGASRAEQLEENVQALNNL--TFSTK
51 HHSearch 66.9024% -83 - C7 -3ERP ? A:[30-340] --RYHTMEY-RRCGRSGVKLPAISLGLWHNFGD-----------TTRVENSRALLQRAFDLGITHFDLANNYG--PPPGS-----AECNFGRILQEDFL---P-WRDELIISTKAGYTMWDG----PYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPET-------------------PLKETMKALDHLVRHGKALYVGISNYPADLARQAIDILEDLGT-PC--LIHQPKYS-LFERWV-EDGLLALLQEKGVGSIAFSPLAGGQLT--------------------DRYLNITADKLEKVRRLNELAA--------------------R--------------------------------------------RGQKLSQMALAWVLRNDNVTSVLIGASKPSQIEDAVGMLANR--RFSAA
59 HHSearch 65.3720% -72 - C7 -1AFS DIDH_RAT A:[2-291] ----DSISL-RVALNDGNFIPVLGFGTTVPEK-------------VAKDEVIKATKIAIDNGFRHFDSAYLYE------------VEEEVGQAIRSKIEDGTV-KREDIFYTSKLWSTF------------HRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDICDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKY--KP--VCNQVECH-LYLNQ---SKMLDYCKSKDIILVSYCTLGSSRDKTWVDQKSPVLLDDPVLCAIAK-----------------------------------------K--------------------------------------------YKQTPALVALRYQLQRGV--VPLIRSFNAKRIKELTQVFE-F--QLASE
57 HHSearch 65.1820% -81 - C7 -1US0 ALDR_HUMAN A:[1-284] ------MAS-RILLNNGAKMPILGLGTWKSP----------------PGQVTEAVKVAIDVGYRHIDCAHVYQ------------NENEVGVAIQEKLREQVV-KREELFIVSKLWCTY------------HEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDTWAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKY--KP--AVNQIECH-PYLTQ---EKLIQYCQSKGIVVTAYSPLGSPDRP--------------------WAKPEDPSLLEDPRIKAIAA----------------------K--------------------------------------------HNKTTAQVLIRFPMQRN--LVVIPKSVTPERIAENFKVFD-F--ELSSQ
54 HHSearch 63.7325% -76 - C7 -3LUT KCAB2_RAT A:[36-346] -----LQFY-RNLGKSGLRVSCLGLGTWVTFGG-----------QITDEMAEHLMTLAYDNGINLFDTAEVYA--AGK-------AEVVLGNIIKKKG----W-RRSSLVITTKIFWGGKA-----ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT-------------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPP--ICEQAEYH-MFQREKVEVQLPELFHKIGVGAMTWSPLACGIVS--------------------G-----------------------------------------KYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQ-VLPKLSSS
49 HHSearch 63.6325% -77 - C7 -3EAU KCAB2_RAT A:[2-312] -----LQFY-RNLGKSGLRVSCLGLGTWVTFGG-----------QITDEMAEHLMTLAYDNGINLFDTAEVYA--AGK-------AEVVLGNIIKKKG----W-RRSSLVITTKIFWGGKA-----ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNT-------------------PMEETVRAMTHVINQGMAMYWGTSRWSSMEIMEAYSVARQFNLIPP--ICEQAEYH-MFQREKVEVQLPELFHKIGVGAMTWSPLACGIVS--------------------G-----------------------------------------KYDSGIPPYSRASLKGYQWLKDKILSEEGRRQQAKLKELQAIAERLGCTLPQLAIAWCLRNEGVSSVLLGASNAEQLMENIGAIQ-VLPKLSSS
61 HHSearch 63.6021% -83 - C7 -1HW6 DKGA_CORSC A:[2-253] -----TVPS-IVL-NDGNSIPQLGYGVFKV----------------PPADTQRAVEEALEVGYRHIDTAAIYG------------NEEGVGAAIAASG----I-ARDDLFITTKLWND-----------------EPAAAIAESLAKLALDQVDLYLVHWPTPAA------------------DNYVHAWEKMIELRAAGLTRSIGVSNHLVPHLERIVAATGV----VP--AVNQIELH-PAYQQ---REITDWAAAHDVKIESWGPLGQGKYD--------------------LFGAEPVTAAAA------------------------------A--------------------------------------------HGKTPAQAVLRWHLQKGF--VVFPKSVRRERLEENLDVFD-F--DLTDT
6 PsiBlast_PDB 63.4532% -70 - C7 -1PYF IOLS_BACSU A:[6-209] ------------LGKSDLQVFPIGLGTNAVGGH-N--LYPN----LNEETGKELVREAIRNGVTMLDTAYIYGIGR---------SEELIGEVLR-------EFNREDVVIATKAAHRKQGN----DFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPD---E----------------HTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANK--------DGLVDVLQGEYNLLNREA--EKTFFPYTKEHNISFIPYFPLVSG---------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 63.2532% -71 - C7 -1PZ0 IOLS_BACSU A:[6-209] ------------LGKSDLQVFPIGLGTNAVGGH-N--LYPN----LNEETGKELVREAIRNGVTMLDTAYIYGIGR---------SEELIGEVLR-------EFNREDVVIATKAAHRKQGN----DFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPD---E----------------HTPKDEAVNALNEMKKAGKIRSIGVSNFSLEQLKEANK--------DGLVDVLQGEYNLLNREA--EKTFFPYTKEHNISFIPYFPLVSG---------------------------------------------------------------------------------------------------------------------------------------------------------------