@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv2421c: (2016-05-10 )
MGGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASNPRFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARFVGVSRPGYELRNEHITSLLGQLAKDALTLVEIPALAISSTDCRQRAEQSRPLWYLMPDGVVQYVSKCRLYCGACDAGARSTTSLAAGNGL

Atome Classification :

(51 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NXX_C_10(2QTR)
NADD_BACAC
[Raw transfer]




DND_B_7(3E27)
?
[Raw transfer]




NXX_B_9(2QTR)
NADD_BACAC
[Raw transfer]




DND_A_5(3E27)
?
[Raw transfer]




DND_I_9(1KAQ)
NADD_BACSU
[Raw transfer]




NXX_A_8(2QTR)
NADD_BACAC
[Raw transfer]




DND_L_12(1KAQ)
NADD_BACSU
[Raw transfer]




NXX_A_8(2QTR)
NADD_BACAC
[Raw transfer]




DND_C_9(3E27)
?
[Raw transfer]




DND_D_11(3E27)
?
[Raw transfer]




NAD_B_5(4WSO)
?
[Raw transfer]




DND_H_8(1KAQ)
NADD_BACSU
[Raw transfer]




NAD_A_3(4WSO)
?
[Raw transfer]




NAD_A_3(4WSO)
?
[Raw transfer]




NAP_A_3(4YBR)
NADD_MYCTU
[Raw transfer]




NAD_A_3(4WSO)
?
[Raw transfer]




NAP_A_3(4YBR)
NADD_MYCTU
[Raw transfer]




DND_J_10(1KAQ)
NADD_BACSU
[Raw transfer]




NAP_B_5(4S1O)
?
[Raw transfer]




DND_K_11(1KAQ)
NADD_BACSU
[Raw transfer]




NAP_A_3(4S1O)
?
[Raw transfer]




NAP_A_3(4YMI)
?
[Raw transfer]




NAP_B_6(4YBR)
NADD_MYCTU
[Raw transfer]




NAP_A_3(4YMI)
?
[Raw transfer]




NAP_B_6(4YMI)
?
[Raw transfer]




DND_G_7(1KAQ)
NADD_BACSU
[Raw transfer]




GOL_B_8(2QTM)
?
[Raw transfer]




GOL_B_7(2QTN)
?
[Raw transfer]




ATP_B_5(1YUN)
NADD_PSEAE
[Raw transfer]




GOL_A_6(2QTN)
?
[Raw transfer]




GOL_A_5(2QTM)
?
[Raw transfer]




LJZ_A_5(3MLB)
NADD_BACAC
[Raw transfer]




LJZ_A_5(3MLB)
NADD_BACAC
[Raw transfer]




CIT_C_9(1YUM)
NADD_PSEAE
[Raw transfer]




CIT_B_7(1YUM)
NADD_PSEAE
[Raw transfer]




JJZ_A_3(3MLA)
NADD_BACAC
[Raw transfer]




CIT_E_5(1K4M)
NADD_ECOLI
[Raw transfer]




CIT_E_5(1K4M)
NADD_ECOLI
[Raw transfer]




CIT_D_11(1YUM)
NADD_PSEAE
[Raw transfer]




CIT_A_5(1YUM)
NADD_PSEAE
[Raw transfer]




CIT_A_5(1YUM)
NADD_PSEAE
[Raw transfer]




DMS_B_8(4RPI)
NADD_MYCTU
[Raw transfer]




DMS_C_11(4RPI)
NADD_MYCTU
[Raw transfer]




DMS_B_9(3MLA)
NADD_BACAC
[Raw transfer]




23 PsiBlast_CBE 96.3799%-144 - C2 -4RPI 3.6 NADD_MYCTU
83 HHSearch 95.9799%-143 - C2 -4YBR 8.0 NADD_MYCTU
4 PsiBlast_PDB 95.7298%-143 - C2 -4YBR 8.0 NADD_MYCTU
24 PsiBlast_CBE 95.3499%-144 - C2 -4RPI 3.6 NADD_MYCTU
2 PsiBlast_PDB 93.4299%-142 - C2 -4RPI - NADD_MYCTU -
22 PsiBlast_CBE 92.8199%-142 - C2 -4RPI - NADD_MYCTU -
1 PsiBlast_PDB 92.73100%-144 - C2 -4X0E - NADD_MYCTU -
25 PsiBlast_CBE 91.0798%-143 - C2 -4YBR 9.6 NADD_MYCTU
27 PsiBlast_CBE 88.4275%-138 - C2 -4YMI 10.0 ?
26 PsiBlast_CBE 87.2198%-154 - C2 -4S1O 8.6 ?
21 PsiBlast_CBE 87.08100%-131 - C2 -4X0E - NADD_MYCTU -
3 PsiBlast_PDB 86.8098%-147 - C2 -4S1O 9.1 ?
87 HHSearch 83.2375%-142 - C2 -4YMI 8.8 ?
5 PsiBlast_PDB 83.2075%-142 - C2 -4YMI 8.8 ?
40 PsiBlast_CBE 75.6938%-130 - C2 -3HFJ - ? -
37 PsiBlast_CBE 74.1238%-130 - C2 -3MMX - NADD_BACAC -
8 PsiBlast_PDB 73.8638%-125 - C2 -3MLA 5.8 NADD_BACAC
43 PsiBlast_CBE 73.5838%-121 - C2 -3E27 9.8 ?
38 PsiBlast_CBE 73.2938%-133 - C2 -3MLB 4.7 NADD_BACAC
28 PsiBlast_CBE 73.1138%-122 - C2 -3DV2 - ? -
9 PsiBlast_PDB 72.5038%-127 - C2 -3MLB 4.6 NADD_BACAC
39 PsiBlast_CBE 72.2838%-130 - C2 -3MLA 3.5 NADD_BACAC
12 PsiBlast_PDB 72.2638%-130 - C2 -2QTM 2.3 ?
84 HHSearch 72.1238%-103 - C2 -4WSO 11.1 ?
46 PsiBlast_CBE 71.9838%-124 - C2 -2QTN 2.3 ?
44 PsiBlast_CBE 71.9838%-121 - C2 -3E27 10.3 ?
45 PsiBlast_CBE 71.9738%-124 - C2 -3E27 9.8 ?
41 PsiBlast_CBE 71.4638%-120 - C2 -2QTR 10.8 NADD_BACAC
42 PsiBlast_CBE 71.0738%-121 - C2 -2QTR 7.6 NADD_BACAC
47 PsiBlast_CBE 70.6438%-121 - C2 -2QTM 2.0 ?
57 PsiBlast_CBE 70.5933%-124 - C2 -1YUM 4.1 NADD_PSEAE
11 PsiBlast_PDB 70.4938%-120 - C2 -2QTR 5.3 NADD_BACAC
59 PsiBlast_CBE 70.4133%-125 - C2 -1YUM 3.6 NADD_PSEAE
13 PsiBlast_PDB 70.2438%-125 - C2 -2QTN 2.4 ?
16 PsiBlast_PDB 69.6136%-119 - C2 -1KAQ 8.6 NADD_BACSU
58 PsiBlast_CBE 69.3233%-126 - C2 -1YUM 2.9 NADD_PSEAE
51 PsiBlast_CBE 69.3236%-118 - C2 -1KAQ 3.3 NADD_BACSU
92 HHSearch 69.2540%-114 * C2 *2QTR 5.9 NADD_BACAC
20 PsiBlast_PDB 69.2030%-115 - C2 -1K4M 4.3 NADD_ECOLI
14 PsiBlast_PDB 69.1038%-120 - C2 -3E27 9.2 ?
60 PsiBlast_CBE 68.8133%-123 - C2 -1YUM 3.7 NADD_PSEAE
55 PsiBlast_CBE 68.1033%-121 - C2 -1YUN 3.2 NADD_PSEAE
85 HHSearch 67.5031%-105 - C2 -1K4M 4.3 NADD_ECOLI
49 PsiBlast_CBE 67.1836%-124 - C2 -1KAQ 7.2 NADD_BACSU
52 PsiBlast_CBE 67.1736%-112 - C2 -1KAQ 6.5 NADD_BACSU
50 PsiBlast_CBE 66.0136%-116 - C2 -1KAQ 7.4 NADD_BACSU
106 Fugue 65.7535% -93 - C2 -4WSO 11.1 ?
86 HHSearch 65.3631%-118 - C2 -1YUM 3.7 NADD_PSEAE
48 PsiBlast_CBE 61.7436%-128 - C2 -1KAQ 6.4 NADD_BACSU
17 PsiBlast_PDB 55.5743%-106 - C2 -4WSO 10.9 ?
53 PsiBlast_CBE 54.1143%-103 - C2 -4WSO 10.7 ?