@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : SA1205: (2016-03-23 )
MTKLFIPYIMGNKDLIENATLLSENGADIIEIGVPFSDPVADGPVIMEAGQQAIKQGITIDYIFNQLEKHGDQIKCNYVLMTYYNIICHYGEQAFFEKCRDTGVYGLIIPDLPYELSQRLKQQFSHYGVKIISLVAMTTDDKRIKDIVSHAEGFIYTVTMNATTGQNGAFHPELKRKIESIKAIANVPVVAGFGIRTPQHVADIKEVADGIVIGSEIVKRFKSNTREEIIRYLQSIQQTLNN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

IPL_A_6(1WXJ)
TRPA_THET2
[Raw transfer]




CIT_A_2(1UJP)
TRPA_THET2
[Raw transfer]




CIT_A_2(1UJP)
TRPA_THET2
[Raw transfer]




EDO_A_3(3NAV)
TRPA_VIBCH
[Raw transfer]




1 PsiBlast_PDB 93.3534%-136 - C3 -1RD5 - TRPA_MAIZE -
32 HHSearch 93.0935%-139 - C3 -2EKC - TRPA_AQUAE -
37 HHSearch 91.3535%-136 * C3 *1RD5 - TRPA_MAIZE -
3 PsiBlast_PDB 90.7934%-127 - C3 -1TJR - TRPA_MAIZE -
21 PsiBlast_CBE 89.0434%-140 - C3 -1RD5 - TRPA_MAIZE -
7 PsiBlast_PDB 87.3733%-135 - C3 -2DZP - TRPA_PYRFU -
11 PsiBlast_PDB 86.7533%-132 - C3 -1GEQ - TRPA_PYRFU -
10 PsiBlast_PDB 86.3833%-129 - C3 -2DZW - TRPA_PYRFU -
12 PsiBlast_PDB 86.3233%-129 - C3 -1WDW - TRPA_PYRFU -
14 PsiBlast_PDB 85.3633%-127 - C3 -2DZS - TRPA_PYRFU -
52 Fugue 85.2530%-128 - C3 -1GEQ - TRPA_PYRFU -
16 PsiBlast_PDB 85.1332%-135 - C3 -2DZV - TRPA_PYRFU -
9 PsiBlast_PDB 84.9833%-132 - C3 -2DZU - TRPA_PYRFU -
15 PsiBlast_PDB 84.8233%-131 - C3 -2E09 - TRPA_PYRFU -
13 PsiBlast_PDB 84.6333%-131 - C3 -2DZX - TRPA_PYRFU -
4 PsiBlast_PDB 84.5136%-140 - C3 -2EKC - TRPA_AQUAE -
8 PsiBlast_PDB 83.7833%-130 - C3 -2DZT - TRPA_PYRFU -
53 Fugue 83.2728%-123 - C3 -2TYS - TRPA_SALTY -
36 HHSearch 82.9132%-143 - C3 -1UJP 3.3 TRPA_THET2
33 HHSearch 81.6226%-112 - C3 -3VND - ? -
5 PsiBlast_PDB 76.4533%-138 - C3 -1UJP 3.0 TRPA_THET2
6 PsiBlast_PDB 75.4333%-135 - C3 -1WXJ 4.5 TRPA_THET2