@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Rv0823c: (2016-04-26 )
MSRRRAIQPSPALRIGPIELASPVVLAPMAGVTNVAFRALCRQLEQSKVGTVSGLYVCEMVTARALIERHPVTMHMTTFSADESPRSLQLYTVDPDTTYAAARMIAGEGLADHIDMNFGCPVPKVTKRGGGAALPFKRRLFGQIVAAAVRATEGTDIPVTVKFRIGIDDAHHTHLDAGRIAEAEGAAAVALHARTAAQRYSGTADWEQIARLKQHVRTIPVLGNGDIYDAGDALAMMSTTGCDGVVIGRGCLGRPWLFAELSAAFTGSPAPTPPTLGEVADIIRRHGTLLAAHFGEDKGMRDIRKHIAWYLHGFPAGSALRRALAMVKTFDELDCLLDRLDGTVPFPDSATGARGRQGSPARVALPDGWLTDPDDCRVPEGADAMGSGG

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMN_A_3(3B0P)
DUSAL_THET8
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




FMN_A_5(1VHN)
?
[Raw transfer]




FMN_A_3(4YCP)
DUSC_ECOLI
[Raw transfer]




FMN_A_2(4BF9)
DUSC_ECOLI
[Raw transfer]




FMN_A_2(3W9Z)
DUSC_ECOLI
[Raw transfer]




FMN_B_7(4BFA)
DUSC_ECOLI
[Raw transfer]




FMN_A_3(4BFA)
DUSC_ECOLI
[Raw transfer]




22 HHSearch 97.3830%-106 - C4 -1VHN 8.6 ?
1 PsiBlast_PDB 94.5029%-101 - C4 -1VHN 8.6 ?
42 Fugue 94.0629%-108 - C4 -1VHN - ? -
24 HHSearch 91.9627%-105 - C4 -3B0P - DUSAL_THET8 -
43 Fugue 91.6727%-108 - C4 -3B0P - DUSAL_THET8 -
8 PsiBlast_PDB 89.0729% -94 - C4 -3B0U - DUSAL_THET8 -
44 Fugue 88.8625% -86 - C4 -4BFA - DUSC_ECOLI -
7 PsiBlast_PDB 87.7329% -98 - C4 -3B0P 9.7 DUSAL_THET8
9 PsiBlast_PDB 87.6628% -91 - C4 -3B0V - DUSAL_THET8 -
23 HHSearch 86.6925% -94 * C4 *4BFA - DUSC_ECOLI -
2 PsiBlast_PDB 78.9031% -89 - C4 -4BFA 8.8 DUSC_ECOLI
6 PsiBlast_PDB 77.3330% -92 - C4 -4BF9 9.7 DUSC_ECOLI
4 PsiBlast_PDB 76.3830% -88 - C4 -4YCO - DUSC_ECOLI -
5 PsiBlast_PDB 76.1530% -85 - C4 -4YCP 10.4 DUSC_ECOLI
21 PsiBlast_CBE 75.2831% -90 - C4 -4BFA 10.0 DUSC_ECOLI
3 PsiBlast_PDB 74.3631% -91 - C4 -3W9Z 10.1 DUSC_ECOLI
25 HHSearch 68.8424% -54 - C4 -4XP7 - DUS2L_HUMAN -
37 HHSearch 65.0616% -97 - C4 -1PS9 - FADH_ECOLI -
26 HHSearch 64.8517% -96 - C4 -3HGJ - ? -
32 HHSearch 64.2019% -78 - C4 -1EP3 - PYRDB_LACLM -