@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Comparative Docking Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : PA3645: (2016-02-19 )
MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKMLDVKPADGTLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEIICAERKL

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EMO_C_15(3ED0)
?
[Raw transfer]



2BC_B_11(3DP0)
?
[Raw transfer]



4BB_A_10(3DP3)
?
[Raw transfer]



2RB_B_10(3DP1)
?
[Raw transfer]



SCB_A_15(2GLM)
FABZ_HELPY
[Raw transfer]



3BE_B_14(3DOZ)
?
[Raw transfer]



SAK_A_15(3D04)
?
[Raw transfer]



EMO_A_10(3ED0)
?
[Raw transfer]



2BE_A_10(3DOY)
?
[Raw transfer]



QUE_A_16(3CF8)
?
[Raw transfer]



AGI_A_13(3CF9)
?
[Raw transfer]



4BE_B_13(3DP2)
?
[Raw transfer]



JUG_B_12(3B7J)
?
[Raw transfer]



QUE_C_20(3CF8)
?
[Raw transfer]



SAK_C_17(3D04)
?
[Raw transfer]



BDE_C_22(2GLP)
FABZ_HELPY
[Raw transfer]



2RB_C_12(3DP1)
?
[Raw transfer]



2BE_C_16(3DOY)
?
[Raw transfer]



3BE_C_17(3DOZ)
?
[Raw transfer]



4BE_C_15(3DP2)
?
[Raw transfer]



4BB_C_16(3DP3)
?
[Raw transfer]



AGI_C_17(3CF9)
?
[Raw transfer]
112 HHSearch 95.64100%-163 - C2 -1U1Z - FABZ_PSEAE -
1 PsiBlast_PDB 94.6397%-160 - C2 -1U1Z - FABZ_PSEAE -
92 PsiBlast_CBE 81.1947%-152 - C2 -2GLV - FABZ_HELPY -
83 PsiBlast_CBE 81.0948%-149 - C2 -3CF8 3.3 ?
73 PsiBlast_CBE 80.7148%-153 - C2 -3D04 2.8 ?
77 PsiBlast_CBE 80.3448%-154 - C2 -3CF9 - ? -
22 PsiBlast_CBE 80.2048%-150 - C2 -2GLP - FABZ_HELPY -
82 PsiBlast_CBE 80.1448%-154 - C2 -3CF8 - ? -
97 PsiBlast_CBE 80.0947%-152 - C2 -2GLV - FABZ_HELPY -
6 PsiBlast_PDB 79.5948%-144 - C2 -3B7J 2.7 ?
57 PsiBlast_CBE 79.5548%-152 - C2 -3DP0 - ? -
27 PsiBlast_CBE 79.4748%-151 - C2 -2GLM - FABZ_HELPY -
9 PsiBlast_PDB 79.3748%-150 - C2 -3D04 4.3 ?
15 PsiBlast_PDB 79.2248%-150 - C2 -3DP3 3.6 ?
72 PsiBlast_CBE 79.1948%-152 - C2 -3D04 - ? -
16 PsiBlast_PDB 78.9748%-146 - C2 -3ED0 3.3 ?
62 PsiBlast_CBE 78.7448%-151 - C2 -3DOZ - ? -
29 PsiBlast_CBE 78.7448%-150 - C2 -2GLM - FABZ_HELPY -
78 PsiBlast_CBE 78.7348%-152 - C2 -3CF9 3.2 ?
37 PsiBlast_CBE 78.6748%-150 - C2 -3ED0 - ? -
68 PsiBlast_CBE 78.4648%-149 - C2 -3DOY 3.5 ?
48 PsiBlast_CBE 78.3548%-147 - C2 -3DP2 2.8 ?
8 PsiBlast_PDB 78.3448%-149 - C2 -3CF9 3.4 ?
13 PsiBlast_PDB 78.1148%-149 - C2 -3DP1 4.8 ?
14 PsiBlast_PDB 78.0448%-146 - C2 -3DP2 5.4 ?
10 PsiBlast_PDB 77.9648%-143 - C2 -3DOY 4.6 ?
23 PsiBlast_CBE 77.8548%-146 - C2 -2GLP 3.7 FABZ_HELPY
38 PsiBlast_CBE 77.8348%-150 - C2 -3ED0 Error ?
7 PsiBlast_PDB 77.7248%-147 - C2 -3CF8 3.7 ?
12 PsiBlast_PDB 77.7048%-142 - C2 -3DP0 4.4 ?
53 PsiBlast_CBE 77.3748%-152 - C2 -3DP1 3.0 ?
63 PsiBlast_CBE 77.2748%-149 - C2 -3DOZ 2.7 ?
11 PsiBlast_PDB 76.7248%-152 - C2 -3DOZ 4.9 ?
4 PsiBlast_PDB 76.4948%-149 - C2 -2GLM 4.6 FABZ_HELPY
43 PsiBlast_CBE 75.7848%-150 - C2 -3DP3 4.0 ?