@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : jhp_0032: (2015-12-11 )
MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKGGVALKELPKGVYLYYSKTYPKHAKVIKSDPFIGLYLLQSAPSEYVYTLRDLDKDALIRPMASIGANQATEARLLVGQKGYDRYAQISQKTQKNGVISNICYQMLGLGVGGNGFIETKFIKRFLNQQEPYYGDIGVRLEERHKRLVVAQFDPFFPKNPFLKNDEILAINDYKIHSLAEFEWVVSNLSYQSLAKVKIKRNHQIKEVTLKVNKRYGGFLLKDTFLERYGIALDERFIITKIGAHLPKGLDFLKLGDRILWVNHKSVSFNPKALREALSTPKIELLVWRQGFEFYIKVR

Atome Classification :

(20 SA) ----.........10........20........30........40..----------------------......---.50...---------.....---60........70.....--...80-.---....-....90.--....--------...100..-----..-.----..-110.......-----120-----......---..130........140......------.---150---------------..-..----.----...160...-.....----170...-....------------------180-----------.-------...-----..----------...190----...---.-.-..200---------.........210.--.-..--...--220.....--..230.....--..240------.--.....-.250-.....-...260------.......------------270------....------------.....280......-.290.......300...-..-..310..-.---.---..--.320..-.....330...-----
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MMFHKALITFIVLWFFLNGLGAYDFKHCQAFFKKASLQKG-GV----------------------ALKELP---KGVYLY---------YSKTY---PKHAKVIKSDPFIGLYL--LQSA--P---SEYV-YTLRDLD--KDAL--------IRPMASIG-----AN-Q----AT-EARLLVGQKG-----YD------RYAQIS---QKT-QKNGVISNICYQMLGLGV------G---GN----------------GF-IE----T----KFIK-RFLN-QQEPY----YGDIGV-RLEE------------------R-------------H-------KRL-----VV----------AQFDPF----FPK---N-P-FLK-----------NDEILAINDYKIH--S-LA--EFE--WVVSNLSY--QSLAKVKIKR--NHQIK------E--VTLKV-NK-R-YGGFL-LKDTFL------ERYGIAL------------D--------ERFI------------ITKIGAHLPKGLDF-LKLGDRILWVNHKSVSF-NP-KALREAL-S---T---PK--IELLVW-RQGFEFYIKVR-----
5 PsiBlast_PDB 81.8321% -50 - C5 -3OTP - DEGP_ECOLI A:[124-439] -------------------------------------------------------------------------------------------------------DAKMVGKDPRSDIAL--IQIQ--N---PKNL-TAIKMAD--SDALRVGDYTVAIGNPFGLG-----ET-V----TS-GIVSALGRSGLNAENYE------NFIQTDAAINRG-NAGGALVNLNGELIGINTAILAPDG---GNIGI-------------GFAIP----S----NMVK-NLTS-QMVEYGQVKRGELGI-MGTE------------------L-------------N-------SELAKAMKVD----------AQRGAFVSQVLPN---S-S-AAKAGIKA------GDVITSLNGKPIS--S-FA--ALR--AQVGTMPV--GSKLTLGLLR--DGKQV------N--VNLEL-QQ-S------------FNGIEGAEMSNKGK------------D--------QGVV------------VNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NI-AELRKVLDS---K---PS--VLALNI-QRGDSTIYLLM-----
3 PsiBlast_PDB 77.8021% -45 - C5 -3MH6 DEGP_ECOLI A:[124-439] -------------------------------------------------------------------------------------------------------DAKMVGKDPRSDIAL--IQIQ--N---PKNL-TAIKMAD--SDALRVGDYTVAIGNPFGLG-----ET-V----TS-GIVSALGRSGLNAENYE------NFIQTDAAINRG-NSGGALVNLNGELIGINTAILAPDG---GNIGI-------------GFAIP----S----NMVK-NLTS-QMVEYGQVKRGELGI-MGTE------------------L-------------N-------SELAKAMKVD----------AQRGAFVSQVLPN---S-S-AAKAGIKA------GDVITSLNGKPIS--S-FA--ALR--AQVGTMPV--GSKLTLGLLR--DGKQV------N--VNLEL-QQ-S-SQNQV-DSSSIFNGIEGAEMSNKGK------------D--------QGVV------------VNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NI-AELRKVLDS---K---PS--VLALNI-QRGDSTIYLLM-----
36 Fugue 73.8619% -77 - C5 -3PV2 - ? A:[6-439] MPSMAPVLKNIMPAIVNVAVQGYLPNRKFESIGSGVIIDPNNGV-II----------------------TNDHVI---RNASLI---------TVTLQDGRRLKARLIGGDSETDLAV--LKID--A---KNLKSLVIGDSD--KLEV--------GDFVVAIGNPFGLSQ-S----AT-FGIVSALKNF-----IQ------TDAAIN---PGN-S-GGALVNAKGELIGINT------AILVGI----------------GFAIP----I----NMVK-DVAQ-QIIKFGSIHRGLMGI-FVQH------------------L-------------T-------PEL-----AQAMGYPEDFQGALVSQV----NPN---S-P-AELAGLKA------GDIITQINDTKIT--Q-AT--QVK--TTISLLRV--GSTVKIIVER--DNKPL------T--LSAVVTDI-K-SHEQK-LQSNNP------FLYGLAL------------R--------AFEQESPPHGNVIGVQVVGASENSAGWRAG-IRPGDIIISANKKPVT--DV-KSLQTIA-Q---E---KKKELLVQVL-RGPGSMYLLVI-----
16 HHSearch 73.2420% -66 - C5 -3PV2 - ? A:[96-438] ---------------------------------------------------------------------------------------------LQDGR---RLKARLIGGDSETDLAV--LKIDA-K---NLKS-LVIGDSD--KLEV--------GDFVVAIG-----NPFGLSQSAT-FGIVSALK------------------NFIQTDAAINPGNS--GGALVNAKGELI------G---INTAILVGI---------GFAIP----INMVKDVAQ-QIIK-FGSIH----RGLMGI-FVQH------------------LTPELAQAMGYPEDF-------QGA-----LV----------SQVNPN----SPAEL-A-G-LKA-----------GDIITQINDTKIT--Q-AT--QVK--TTISLLRV--GSTVKIIVER--DNKPL------T--LSAVV-TD-I-KSHEQKLQSNNP------FLYGLALRAFEQESPPHGNV--------IGVQ------------VVGASENSAGWRAG-IRPGDIIISANKKPVTD-V--KSLQTIA-QEK-K---KE--LLVQVL-RGPGSMYLLVI-----
2 PsiBlast_PDB 71.3721% -38 - C5 -2ZLE - DEGP_ECOLI A:[87-389] -------------------------------------------------------------------------------------------------------DAKMVGKDPRSDIAL--IQIQ--N---PKNL-TAIKMAD--SDALRVGDYTVAIGNPFGLG-----ET-V----TS-GIVSALGR--------E------NFIQTDAAINRG-NSGGALVNLNGELIGINTAILAPDG---GNIGI-------------GFAIP----S----NMVK-NLTS-QMVEYGQVKRGELGI-MGTE------------------L-------------N-------SELAKAMKVD----------AQRGAFVSQVLPN---S-S-AAKAGIKA------GDVITSLNGKPIS--S-FA--ALR--AQVGTMPV--GSKLTLGLLR--DGKQV------N--VNLEL-QQ-S-SQNQV-DSSSIFN-----EMSNKGK------------D--------QGVV------------VNNVKTGTPAAQIG-LKKGDVIIGANQQAVK--NI-AELRKVLDS---K---PS--VLALNI-QRGDSTIYLL------
6 PsiBlast_PDB 63.1921% -21 - C5 -3MH4 - DEGP_ECOLI A:[124-353] -------------------------------------------------------------------------------------------------------DAKMVGKDPRSDIAL--IQIQ--N---PKNL-TAIKMAD--SDALRVGDYTVAIGNPFGLG-----ET-V----TS-GIVSALGRS--------------NFIQTDAAINRG-NAGGALVNLNGELIGINTAILAPDG---GNIGI-------------GFAIP----S----NMVK-NLTS-QMVEYGQVKRGELGI-MGTE------------------L-------------N-------SELAKAMKVD----------AQRGAFVSQVLPN---S-S-AAKAGIKA------GDVITSLNGKPIS--S-FA--ALR--AQVGTMPV--GSKLTLGLLR--DGKQV------N--VNLE----------------------------------------------------------------------------------------------------------------------------------------------------
17 HHSearch 61.5519% -33 - C5 -3STJ DEGQ_ECOLI A:[93-334] -----------------------------------------------------------------------------------Q---------LNDGR---EFDAKLIGSDDQSDIAL--LQIQNPS---KLTQ-IAIADSD--KLRV--------GDFAVAVG-----NPFGLGQTAT-SGIVSALGRS-----GLNLE---GLENFIQTDASINRGNS--GGALLNLNGELI------G---INTAILAPGGGSVGI---GFAIPSNMAR----TLAQ-QLID-FGEIK----RGLLGI-KGTE------------------MSADIAKAFNLDV-Q-------RGA-----FV----------SEVLPG----SGSAK-A-G-VKA-----------GDIITSLNGKPLN--S-FA--ELR--SRIATTEP--GTKVKLGLLR--NGKPL------E--VEVTL-DT-S----------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 59.1923% -93 - C5 -3WKM - Y1964_AQUAE A:[10-158] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EPV-----VV----------GYVQRD----SIAQK-I-G-IKP-----------GDKIIKINGYEVR--T-WE--DLR--DALIRLSLDGVKETTLFLER--NGEVL------H--LTIKV-PN-V-Q---------KG------EELGIAP------------L--------VKPV------------VGGVKKGSPADQVG-IKPGDLILEVNGKKINT-W--YELVEEV-RKSQG---KA--IKLKIL-RNGKMIEKELI-----
27 HHSearch 56.9220% -88 - C5 -3GSL - DLG4_RAT A:[92-249] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSI-----FI----------TKIIPG----GAAAQ-D-GRLRV-----------NDSILFVNEVDVR--E-VT--HSA--AVEALKEA--GSIVRLYVMR--RKPPAEK----V--MEIKL-IK-G-P-----------------KGLGFSIAGGVGNQHIPG-D--------NSIY------------VTKIIEGGAAHKDGRLQIGDKILAVNSVGLED-VMHEDAVAAL-KNT-Y---DV--VYLKVA-KPSNAETMA-------
29 HHSearch 55.8418% -82 - C5 -3R0H INAD_DROME A:[28-200] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKPMGV-IVCG------------------G-------------KNNHVT--TGC-----VI----------THVYPE----GQVAADK-R-LKI-----------FDHICDINGTPIHVGS-MT--TLKVHQLFH-TTY--EKAVTLTVFR--ADPPE------LEKFNVDL-MK------------KAG------KELGLSLSPN---------E--------IGCT------------IADLIQGQYPEIDSKLQRGDIITKFNGDALEG-LPFQVCYALF-KGA-N---GK--VSMEVT-RPKPTLRTEAP-----
1 PsiBlast_PDB 55.3740% -30 * C4 *4YO1 ? A:[301-345] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVIVQINDTKIT--Q-AT--QVK--TTISLLRA--GSTAKIKILR--DN--K------P--LTLDV-EV-T-D--------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 54.9511% -44 - C5 -3QO6 DEGP1_ARATH A:[12-334] ---------------------LQTDELATVRLFQENTPSVVYIT-NLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQT---TFDAKVVGFDQDKDVAV--LRID--APKNKLRP-IPVGVSA--DLLV--------GQKVFAIG-----NPFGLDHTLT-TGVISGLRRE-----ISSAATGRPIQDVIQTDAAINPGNS--GGPLLDSSGTLI------G---INTAIYSPSGASSGV---GFSIPVDTVG----GIVD-QLVR-FGKVT----RPILGI-KFAP------------------D-------------QSVEQLGVSGV-----LV----------LDAPPS----GPAGK-A-G-LQSTKRDGYGRLVLGDIITSVNGTKVS--N-GS--DLY--RILDQCKV--GDEVTVEVLR--GDHKE------K--ISVTL-EP-K-P--------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 53.6217% -31 - C5 -1TE0 - DEGS_ECOLI A:[106-352] ----------------------------------------------------------------------------------VA---------LQDGR---VFEALLVGSDSLTDLAV--LIIK--ATG-GLPT-IPINARR--VPHI--------GDVVLAIG-----NPYNLGQTIT-QGIISATGRI-----GLNPT---GRQNFLQTDASINHGNS--GGALVNSLGELM------G---INTLSFDKSNDGETPEGIGFAIP----FQLATKIMD-KLIR-DGRVI----RGYIGI-GGRE------------------IAPLHAQGGGIDQ-L-------QGI-----VV----------NEVSPD----GPAAN-A-G-IQV-----------NDLIISVDNKPAI--S-AL--ETM--DQVAEIRP--GSVIPVVVMR--DDKQL------T--LQVTI-QE-Y-PAT------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 52.1516% -88 - C5 -1P1D - A:[36-212] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GFGI-QLQG------------------SVFATETL------S-------SPP-----LI----------SYIEAD----SPAER-C-GVLQI-----------GDRVMAINGIPTE--D-STFEEAN--QLLRDSSI--TSKVTLEIEF--DVAESVIPSSGT--FHVKL-PK------------KHS------VELGITI------------SSPSSRKPGDPLV------------ISDIKKGSVAHRTGTLELGDKLLAIDNIRLDS-CSMEDAVQIL-QQC-E---DL--VKLKIR-KDED------------
43 Fugue 51.2617% -35 - C1 -3ZX7 TXL_EISFE A:[5-300] -----AEGYEQIEVDVVAVWKEG-YVYENRGSTSVDQKITITKGMKN----------------------VNSE---------------------TRTV---TATHSIGSTISTGDAFE--IGSV--E---VSYS-HSHE------------------------------ES-Q----VSMTETEVYESKV-----IE------HTITIP---PT--------SKFTRWQLNADV------G---G--------------------------A----DIEYMYLID-EVTPI----GGTQSIPQVIT------------------S-------------R-------AKI-----IV----------G-----------R---Q-I-ILG-----------KTEIRIKHAERKE--YMTV--VSRKSWPAATLGH--SKLFKFVLYE--DW--G------G--FRIKT-LN-TMYSGYE-YAYS-S------DQGGIYF------------D--------QGTD------------NPKQRWAINKSLP--LRHGD--------VVTFMNK-YFTRSGL-C---YDDGPA--TNVYCLDKREDKWILEVVGLVPR
30 HHSearch 51.2214% -64 - C5 -2QT5 GRIP1_RAT A:[18-197] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTTLGL-TVSG------------------GIDK----------D-------GKP-----RV----------SNLRQG----GIAAR-SDQ-LDV-----------GDYIKAVNGINLA--K-FR--HDE--IISLLKNV--GERVVLEVEY--ELPPV------S--IQGSS-VMFR-TVEVT-L-HKEG------NTFGFVIRGGAHDDRNK--S--------RPVV------------ITCVRPGGPADREGTIKPGDRLLSVDGIRLLG-TTHAEAMSIL-KQC-G---QE--ATLLIE-YDVSV-----------
4 PsiBlast_PDB 50.2740% -53 - C4 -4YNN - ? A:[301-345] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DVIVQINDTKIT--Q-AT--QVK--TTISLLRA--GSTAKIKILR--DN--K------P--LTLDV-EV-T-DIKKH-EQKLQS------NNPFLYG------------L--------ALRN------------FEQESPPHGNVVGV-QVVGASETSAGWRAGLR-PG-DIIISAN-K---T---PV--KDIKSL-QAVAHEKGKQL-----
22 HHSearch 50.2117% -41 - C5 -1LCY - HTRA2_HUMAN A:[78-321] ----------------------------------------------------------------------------------------------LSGD---TYEAVVTAVDPVADIAT--LRIQ--TKE-PLPT-LPLGRSA--DVRQ--------GEFVVAMGS----PF-ALQNTIT-SGIVSSAQRP--------------NVEYIQTDAAIDFGNA--GGPLVNLDGEVI------G---VNTMKVTAGI--------SFAIP----S----DRLR-EFLHR----------RYIGV-MMLTLSPSILAELQLREPSFPDV-------------Q-------HGV-----LI----------HKVILG----SPAHR-A-G-LRP-----------GDVILAIGEQMVQ--N-AE--DVY--EAVR---T--QSQLAVQIRR--GRETL------T--LYVTP-EV-T-E--------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 49.6817% -82 - C5 -1W9E SDCB1_HUMAN A:[15-164] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGKIGL-RLKS------------------I-------------D-------NGI-----FV----------QLVQAN----SPASL-V-G-LRF-----------GDQVLQINGENCA--G-WS--SDKAHKVLK-QAF--GEKITMTIRD--RPFER------T--ITMHK---------------DST------GHVGFIF------------K--------NG-K------------ITSIVKDSSAARNG-LLTEHNICEINGQNVIG-LKDSQIADIL-STS-G---TV--VTITIM-PAF-------------
45 Fugue 48.8717% -11 - C2 -3R6O ? A:[22-323] ------MNLRIVSFAWQPGVLIDDDTVAPLAPMSARELIALLPQ-IS----------------------PLISDE-------LV---------PLDSV---ALGAPIPEPGQVIALGFNYPTHD--P---VVFM-KSPTSISGPRDAV--------IAPRTSHA-----LD-Y----EI-EIAVVIGKPG-----YRI-----ERSQAI---KHV-AGYMLANDITARDVALPF------G---QA----------------QV-VR----G----K------------------------------------------------------------------------------------------GYPTF----CPT---G-P-WLF-----------TTG----SDTTFE--T-F---DFE--LRINGELR--QSGSTVDMTLGFAEVVE------T--VSATI-AL-R-AGDII-LTGTP---------GGCGF------------Q--------------------------------FDPPRY-LRPGDVIEAHSAK--------------L-G---K---MR--LPVHDE-KP--------------